Porphyrobacter sp. LM 6: BG023_11944
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Entry
BG023_11944 CDS
T04468
Name
(GenBank) FAD binding domain of DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
porl
Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porl03400
]
BG023_11944
Enzymes [BR:
porl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BG023_11944
DNA repair and recombination proteins [BR:
porl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BG023_11944
Prokaryotic type
BG023_11944
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AOL93887
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Position
complement(968772..970004)
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AA seq
410 aa
AA seq
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MDFAPTRAAALARLARFLPAAGRHYAETRNADDGPRAEGRGNVSQLSPWLHGGLIGEREV
LEAVLGQHSPRAAEKFIAEVFWRIYFKGYLEQRPAIWDDYRAGRDAALAALERNAGLRTA
YAQATEGRTGIAAFDVWAKELVETGYLHNHARMWFASIWIFTLKLDWRLGADFFLRHLMD
GDAASNTLSWRWVAGLHTKGKHYLAREDNIARYTAGRPEGALTAVGLAGNAEPLSEAQDY
PRQKLNLPAPVTADDLARPFALLLHDEATHHLPLALPAVPSLVIGAARPEARSPGAVGEP
APRFARGAVASGMAEVSAAFGCRAVEWRAGEPLAPLLAQAGVERIALAYLPAGWTRDALM
PDLAPLMAEGRVVTLLGDLARATWPHAKAGFFGVAKQIDALLGECGIAGG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggactttgcccccacccgcgcggccgcgcttgcccgcctcgcccggtttctccccgcc
gctggccgccactatgccgaaacccgcaacgccgatgacggcccgcgcgccgagggacgc
ggcaatgtcagccagctttcgccgtggctccatgggggcctgatcggagagcgcgaggtg
ctcgaagcggtgctcggccagcattccccgcgcgccgcagagaagttcatcgccgaggtg
ttctggcggatctacttcaagggctatctcgaacagcgccccgcgatctgggacgattac
cgcgcgggccgcgatgctgcgctggctgcgcttgagcgcaatgcgggcctccgcactgcc
tatgcgcaagcgaccgagggccgcaccgggatcgccgctttcgacgtgtgggccaaggag
ctggtggagaccggctacctccacaaccacgcccggatgtggtttgcgagcatctggatc
ttcaccctgaagctcgactggcggctcggcgcggacttcttcctgcggcacctgatggat
ggggatgcggcctcgaacacgctgtcgtggcgctgggtcgcggggctgcataccaagggc
aagcactacctcgcgcgggaggataatatcgcgcgctacaccgctggccgccccgaaggc
gcgcttacagccgtcgggctggccgggaatgccgagccgcttagcgaagcgcaggattat
ccgcgccagaagctcaatctgcccgcgccggtaacagccgacgatctggcgcggcccttc
gcgctgctgctgcatgacgaggcgacgcaccacctgcccctcgccctgcctgccgtgcct
tcgctggtgattggtgcggcgcggcccgaggcgcgctcaccgggcgcagtgggagagcct
gcgccgcgctttgcgcgcggcgcggtggcgagcgggatggccgaggtttcggcggctttc
gggtgccgggcggtggaatggcgcgcgggcgagccgctggcaccgctgctggcgcaggcg
ggggtggagcggatcgcgctcgcctatcttccggcgggatggacgcgcgatgcgctgatg
cccgatctcgcgccgctgatggccgaggggcgcgtcgtcacgctgctcggcgatcttgcg
cgcgcgacttggccgcacgccaaggcggggtttttcggagtggccaagcagatcgatgcg
ctgctcggagaatgcgggattgcgggcggctag
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