Panulirus ornatus (ornate spiny lobster): 139745833
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Entry
139745833 CDS
T10834
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
porn04131
]
139745833 (Gapvd1)
Membrane trafficking [BR:
porn04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
139745833 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RasGAP
DUF5601
Motif
Other DBs
NCBI-GeneID:
139745833
NCBI-ProteinID:
XP_071512529
LinkDB
All DBs
Position
63:complement(13519378..13660671)
Genome browser
AA seq
1572 aa
AA seq
DB search
MGSLQSDIGELAHHLKQERLFLEAEKHQIQILNEKVRKTIEQAYHASWVRGEQHRNYNDL
ILRPHSSPPACCQRANLLNQLKFIDGYKVLGFNESFYGDLLSSLRENPRLVARCLVVGEN
QNQEAMQVTARTVFSSVYANCLLPDDETYVLNLLKHLMELQLATSETPSRLLRHGSCAFS
QIYRAYVDTLPQAKVFLTAALHLPIVQLLMEDELFLDIDPSKAAVRFPAEERLKRFGKEG
TLEYNAALAKYRAWTIAKLVKITNRFMESIKDAMNCFPPQLSWLVRVLYDVLLTAKRTDT
REVSAICVDLVFAFFLCPALVTPEPHGICDAPISHISRFNLIQVAQILQVLAMSRWETPD
PRLSDLYSHFDKEVICGVVDGILEGGGSELPPPGGSCLNSPLSTLVRCSCLIPEPRLHAL
IGFLSTVLTDIPDDDEMRKDLEASIGCLKPSHLSPAPSSSSAISTPNTTKKNLLGRVKSN
RIRTTKSHSEGSGDSDSLGSMQESALGSSGQLPGQNSIDEGDMMPPPLDYDTVLVISLNT
SSPPECPGLMSEEKVLSTVQATKSASRVRMNVEDEGDGGGGEATIEKRTRFSLSHDEGSI
GNTSDNLEAISEAASNHSVASSLDDVEQEDQPDNLSDMVSANVSGRGTPNVSGRDTPSSQ
VTEGEEAALRSGEENQPPPPNVPVTVPKPARADIEEKFGRFEIKPLIGGDETVSLVSDTW
STDVLASDSETIEAADRTDRGDQFHDQLLNRHLAELDRMQGDYVSGDATGETFETASEAW
STDVLASDSERMTEFDTDDAQSVARSDDTGRSEVEVELGGSDLLRPEPLHQEDNVTPRAQ
GSRSPVDGTLSGAIGGSSGGILKPMPVLPPSLSSDTSNSIPSGILKPIPVIHSRISGPAT
PPRVEFQPIHPAEENQCLMDRLQSDRVREEESQVEQEIASATQSLGRLSLNLSTLPNNGI
VSGDQHLLLNTFIGDSSGGGSSAPLMDLGGSSEGGHIVVHPHHKLVSSDRGSGEDSSLHL
STTSLASSSSSGSDIVGGSGKLRSASNASSGPTTDSVDTPEPTAPTISMAATGAIPKSIS
FDKTAERGDRDTIDGDAKHKRGFFKNFKLPGFKGRRKPGSRSGDDTTYIRAGLNSQEVII
RRALSEENRPPTIEETSDDILAKYRNKKPDMDTSEPDSGIVSAHSMQVSEVPKTEEDERL
YIDPSNIELSYAFTDAKRKLRLVLSIADFSTSPYLPEFGAATGSDSSLDGDVLTWLRCQL
AEATNLHDRALVAQLHETLRCVQLFDAQGREQLVRSLIEDYRSRSPYVAYLVRSRQGLLT
TIAHLEKLLSRIDADTAVVMSSIVGVCVRMFLERREQSLSHFTHDFTVLTVPDEKVQLVE
NFLSQLYSELERDPMWISSTSEQLHAAQLALERVVMSHIYIHALYPNGDGDVSRDQVLHD
HMKKLAAVITPTHKDLRIPKLYQYECPWPSAQAEIVCISAYKTPGDKLQCVVRASQTIMN
LLSLAHNQSVPAADDFMPVLVYVLIKANPPALLSTVQYVNLFFEKRLKGEDQYWWTQFCA
AIEFIKTMDYMP
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtctacagtcagacataggagagctggctcatcacttgaagcaggagagatta
tttcttgaagcagagaagcatcagatacagatactgaatgaaaaagtgcggaaaacaatt
gagcaagcttatcatgcctcatgggttcggggagaacaacacagaaactacaatgacctt
attctacggcctcactcgtcaccacctgcctgctgtcaaagagcaaacctgttgaatcag
ttgaaattcattgatggatacaaggtgttgggattcaatgaatctttttatggggattta
ctctcaagccttcgtgaaaatccaaggctcgttgcaagatgtctggttgtgggagagaat
cagaaccaagaagcaatgcaggttacagcaagaacagtgttctcttcggtgtatgccaac
tgtcttctcccagatgatgaaacttatgttctcaacttgctgaaacacttgatggagctg
cagttggcaacttcagaaaccccaagtcgcttattacgccatggatcatgtgctttcagc
caaatttaccgagcctatgtggacacacttcctcaagcaaaggtatttttgacagctgcc
cttcatctgccaattgtacagcttttaatggaagatgaactattccttgacattgaccct
tcaaaagctgctgtgcgtttccctgctgaggaacgtcttaaaagatttggcaaagaaggc
actttagaatacaacgctgccttggcaaagtatcgagcatggaccattgccaagctagtt
aaaatcactaacaggttcatggagagtattaaagatgcaatgaattgcttcccacctcaa
ctgtcttggcttgttagagttctttatgatgtgcttctaacagcaaagcgaacggacacc
agagaagttagtgctatctgtgtagatctggtgtttgcatttttcctgtgtcctgctctt
gtgacgccagaaccacatggaatttgtgatgcaccaatttctcatatctcaaggtttaat
ctaattcaggtcgctcagattcttcaagtcctggcaatgagccgctgggagacacctgat
cctagactgtctgatttgtactcccactttgacaaggaagtaatatgtggtgttgtggat
ggtattctggaaggtggagggtcagagcttccccctcctggtggttcttgcctcaatagc
cccttgagtaccctggttcgctgctcttgtctcattcctgaacctcggttacatgcactc
attgggtttcttagtactgtactcactgatataccagatgacgacgaaatgagaaaggat
ctagaggcatcaattggttgcctcaaaccttctcatttatccccagcaccatcatccagt
tcagctatttctaccccaaacactaccaagaagaatttgttgggacgagtgaaaagcaac
aggattagaaccactaagagtcatagtgaaggtagtggtgactctgattctcttggttca
atgcaagagtctgcacttggcagttctggtcagctgccaggacaaaatagtatagatgag
ggagatatgatgcctcccccattagattatgacacagttttggtaatctcgctcaacact
tccagtcctcctgaatgtccaggacttatgtccgaggaaaaggtgctctctacagtacag
gcaaccaaatcagcttctcgtgtgagaatgaatgtagaggatgaaggtgatggtggagga
ggggaggccacaatagaaaaacggactcgattttcactttcacatgatgagggatcaatt
ggaaacacatcagataacttagaagctattagtgaagctgcaagcaatcatagtgttgca
tcgagtttggatgatgttgaacaggaggatcaacctgacaacttatcagacatggtctcg
gcaaatgtatctggccgtggaactcccaatgtgtcaggtcgagatactccttcatcacaa
gtaacagagggtgaagaggctgctttgagaagtggagaagaaaaccagcctccaccacct
aatgttccagttactgttccaaagccagcaagggctgatattgaggaaaagtttggacgt
tttgaaatcaaacctctgataggtggagatgaaactgtatctttagtgtctgatacttgg
agcactgacgtattagccagtgattctgaaactattgaagcagcagatagaacagatcgt
ggagatcagtttcacgatcagctcctaaatcgacatttagcagaactagataggatgcaa
ggagactatgtgagtggagatgctaccggagagacttttgaaactgcttctgaagcttgg
agcacagatgttttagcttctgattcagagagaatgacagagtttgacacagatgatgct
caaagtgttgcacgttcagatgatacaggacgatcagaagttgaagttgaattgggtgga
agtgacctgctgagaccagaacctttacatcaagaagataatgttactccgcgtgctcag
ggatctcgatctccagttgatggaacactcagtggtgccattggaggtagtagtggtggc
atattaaaaccaatgccagtgttacctccctctttaagttcagatacaagtaacagtata
ccaagtggtattttgaaacccattccagtgattcatagtcgaataagtggaccagcaact
ccccctcgagtggaatttcaacctatccatccagctgaagagaaccagtgcctcatggat
agattgcagtctgacagagtaagagaagaagagtctcaggttgaacaggaaattgcatct
gctacacagtctttggggcgtctaagccttaatctttctacattacctaataatgggatt
gtgtctggtgatcagcacctcttactcaatacttttattggtgatagtagtggaggagga
tccagtgctccactcatggatttaggtggcagtagtgaaggtggacatattgttgttcat
cctcaccataagctagtgtctagtgaccgtggttcaggagaggacagcagccttcattta
agtactacaagtttagcatcctccagcagttcaggatcagacatagtcggaggctctggt
aaattgcgctctgcttcaaatgctagttctggcccaacaacagattcagttgatacccca
gaacccactgcaccaacgatcagtatggcagccacaggtgcaattcctaaaagcattagc
tttgataaaacagcagaacgaggagatcgtgatacaattgatggtgatgcaaaacacaaa
cgaggctttttcaaaaactttaagctcccagggtttaagggtcgtcgtaaacctggaagt
aggtctggcgatgatacaacctatatacgtgcaggactgaacagccaagaagtgatcatt
agacgagctctttctgaagagaaccgacctcctactattgaagaaacaagtgatgacata
ctggcaaaataccgaaataagaagccagatatggatacgtcagagccagatagtggcatt
gtctcagctcacagtatgcaagtgagtgaggtaccaaagacagaggaagatgaaagactg
tacatagacccaagcaacattgaattaagttatgcctttactgatgcaaaaagaaagttg
cgattagttttaagcattgcggatttctccacctcaccttacctgccagaatttggagca
gcaacaggatccgactccagcttggatggtgatgtcttgacatggttacggtgtcagttg
gcagaagcaaccaatctccatgatcgtgctcttgtggctcagttgcatgaaactctacgc
tgtgtgcagctttttgatgctcagggccgagaacaactggttagaagcttgattgaggat
tatcgcagcagatcaccctatgttgcttatcttgtccgtagtaggcaaggattactcaca
acaattgcacacctagaaaaacttttgtcaagaattgatgcagatactgctgttgtgatg
tcgtccatagttggagtttgtgtgagaatgttccttgaacgtagagagcaaagtctcagt
cactttactcatgattttactgtgcttactgttcctgatgaaaaagtccagcttgttgaa
aatttcttgtcacaactctattctgaactggagcgggatcctatgtggataagtagcacg
agtgagcagttacatgcagcacagttagcattagaacgggttgtaatgtctcacatctat
atccatgctctttatccaaatggtgatggagatgtatccagagaccaggttttgcatgat
catatgaagaaactggctgcagtgatcacaccaacccataaagacctaaggatacctaag
ttgtaccagtatgaatgtccttggcccagtgctcaagcagaaattgtgtgcatcagtgca
tacaaaacaccaggagacaaactgcaatgtgttgtgagagcatctcaaacaattatgaac
ttgttgtcccttgcacataatcagtcggtccctgcagcagatgactttatgccggtctta
gtctatgtgcttattaaggccaatccaccagcacttctttcgacggtacagtatgtgaat
ctcttctttgagaagcggctgaagggggaggaccagtattggtggacacagttttgtgca
gctattgaatttatcaagactatggactatatgccctga
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integrated database retrieval system
