Panulirus ornatus (ornate spiny lobster): 139745910
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Entry
139745910 CDS
T10834
Symbol
Cyfip
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139745910 (Cyfip)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139745910 (Cyfip)
Factors involved in mRNA localization
Other mRNA localization factors
139745910 (Cyfip)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
139745910
NCBI-ProteinID:
XP_071512680
LinkDB
All DBs
Position
63:2332760..2595467
Genome browser
AA seq
1616 aa
AA seq
DB search
MDDLPPPPDNYLDMPPSLPPPQLMDYDVGLPPPPPPPPEDYDGSPPSLPPPPDYDFPLTR
PVSGQDLAQVQDILPPPPQPPLHVKDGQVWSAGSRDASHGSLNHCSEPDYESIGSRHSTS
SSLTYLAPNGDNIGHLTTGLAGSTSSSRRENKQSPSGGGKIGQRSSSLSISGRMSMKGSD
QGGPGSGWGPGESTKHRRISSASVAVYTHPFMMTCHADESLYGTISRASRRLSNDNHHHH
SAVEAYGTIRRGQVKQRDSTLSLHRPDPSYPLSGTSTSNRDLRNVSWQPSHLTHGGSGSS
IMSRSVSSGSLVATSSLASMPQEHLPVRGFLDKLKPVPSVVSGDVVSMSGERVTITDALS
NVDVLDDLPLPDQQPVIEAQPCSVVYIANFDTNFEDRMAYVTGVAKYMEEAATHAELNKL
LEEGEQHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVRVLSDEVKKLTKFMNFQRKA
IDVFCTQVKRLCHQEKRKDFVSEAYLLTLGKFINMFAVLDELKNMKSSVKNDYSTYRRAA
QFLKVMSDTQSLQESQNLSMFLATQNKIRDTLKEKLTAIPSYEDLLCDVVNISVHMFENH
MYLTPKEKQMLVKVMGFGLFLIDSDICNINKLDQKKKIKLDKIDKIFKNLEVVPLFGDMQ
IAPFNYIKRSKNFDSKMWPLCSASSISPQADLMCHLPRIREEHIKYISELARYSNEVITT
YKETARTDAENKDIADLALRGLQLLSEWTSVVTELYSWKLLHPTDHHSNNHCPVDAEEYE
RATRYNYTDEEKFALIEVIAMIKGLQVLMARMETVFLDSIRRNIYQELQDFVQLTLRDPL
RKAIKNKKELLRTILVSVRETSADWIKGIEPSEDPALKGKKDPDNGFEIKVLRRNVGPSS
TQLYMVRTMLESLISDKSGGKKTLRKELDGQHLCQIDEFHKTSFFWTYLLNFSGEKLLFR
GGLFCKPTCTVEHQHNEECKDLVVMEKRIQFPIEMSMPWILTDHILRTKDASMMECVLYP
LDLYNDSAYYALTQFRKQFLYDEIEAEVNLCFDQFVFKLSEQVFAYYKHLAGSILLDKRF
RSECSQHNMRIHYPPANRYETLLKQRHVQLLGRSIDLNKLICQRINASMHKSLEVAIARF
EGADITSVVELEGLIEVNKLTHKLLSQLLVLDDFDAQLREANHNVLAPYGRTTLHVFWEL
NYDFLPNYCYNAATGRFVKAVVTTFAQPVQRDKPPNVAPYMVWGSKALNVAYTTIYSQYS
GFLGPPHLRSIVRVLGYQGIAVVMQELLEIIHSLIQGNILQFTKTLLQAMPKQCKLPRYD
YGSPGVLGYYHAQLNDIVQYPDARADLFHHFRELGNALLFCLLIEQSLTLEEVCDLLQAA
PFQNILPRPYCKEGEKPETKQKRLEAKYAPLQIVANIERLGTAKQAMIAREGDLLTRERL
CCGLSIFEVILTRIQSFLEDPIWHGSPPANGVMNVDECTEFHRLWSALQFVMCIPVGANN
FTVEQLFGEGLNWAGCCMIVLLGQQRRFEALDFCYHILRVQKVDGKDEPIKGIQLKRMCD
RIRRFQVLNSQIFAVLNKYLKTSDPDNMPVEHVRCFQPPIHQSLANQTYQRPDHLR
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccttcctccaccacctgacaactacctcgatatgccgccatctcttccaccg
cctcaacttatggactacgacgttggcctaccaccgcctccacctcccccgcccgaggat
tacgatggttccccaccgtcgctccctccacctccagactacgacttcccattgacacgc
cctgtgtcaggccaggacttggcacaggtacaggatattctcccaccaccaccacaacca
ccgctacatgtgaaggatggccaggtgtggtccgctggctcacgggacgccagccatggg
tcgttgaatcactgttcggagccggactatgagagtattggcagccgtcactctacaagt
tcctccctgacgtacctggcgcccaacggcgacaatataggtcacctgacgacgggcctg
gctgggagcacttccagttctaggagggagaacaagcaaagccctagtggtggtggcaag
attggccagaggagctcaagcttgagtatatctgggagaatgagcatgaagggctctgac
cagggaggtcctgggtcagggtggggaccaggagaatccacaaagcaccgtaggatatca
tcagcctccgtggcagtttacacccaccccttcatgatgacttgccacgctgatgagagt
ctgtatggcaccataagccgggcctccagacgcctctcaaacgataaccaccatcaccac
tctgcagtggaagcctacggtaccatccgccgggggcaggtcaagcagcgcgactccacc
ctctcgctccaccggcctgacccttcatatccacttagcggcacctccacctccaacagg
gacctacgtaacgtcagctggcagccctcccacctcacgcacgggggaagtggttcctcc
ataatgagcaggtcggtgtcttccggatccttggtagccacgtcttccctcgcctccatg
ccccaggagcaccttccagtccgcgggttcttagacaagctgaagccagtgccaagtgtc
gtgagcggtgatgtagtcagtatgtctggtgaacgtgtcacaattactgatgcacttagc
aatgttgatgtcttggatgacttgcctctgccagaccagcagccagtcattgaggctcag
ccatgttcagttgtatatattgcaaattttgataccaactttgaagatcgaatggcttat
gtgacaggtgtggcaaaatacatggaagaagctgccacacatgctgaattgaataaactg
ctagaggaaggagagcagcatgcagtgatgttgtacacatggcgctgctgctcccgtgct
atcccgcagcctaaatcaaatgaacaacctaaccgagttgagatttatgagaagactgtc
agagttctctctgatgaggtgaagaaattaacaaaattcatgaatttccagcgcaaggct
attgatgttttctgcactcaagtaaaacggctgtgccaccaggagaagagaaaggatttt
gtatctgaagcatatctacttacccttggaaaatttattaatatgtttgcagttttggat
gaactaaagaacatgaagtctagtgtaaagaatgattactcaacatacagaagggctgca
cagttccttaaggtaatgagcgatacacagtctcttcaggagtcacagaatctctcaatg
ttccttgcaactcagaacaaaattcgtgacaccctcaaggaaaaacttacagcaatccca
tcttatgaggatcttctatgtgatgtggtaaatatctctgttcatatgtttgaaaaccat
atgtacttgacccccaaggagaagcaaatgctggtgaaagtgatgggctttggcttgttc
ctcattgattcagatatctgcaacatcaacaaactggaccagaagaagaagataaaactg
gataagatagacaagatttttaagaatttagaagttgtaccactgtttggagatatgcaa
attgctccattcaattatataaagaggagtaagaactttgactcaaagatgtggccactg
tgtagtgcttcgtccattagtccccaggcagacctgatgtgccacctgccccgcatccgt
gaagaacacatcaagtatatctctgaacttgctagatatagtaatgaggtcattactaca
tataaagaaacagccaggacagatgctgagaacaaagacattgcagatctagccctacga
ggtttgcagcttctcagtgaatggacaagtgttgtcacagaattgtattcttggaaactt
cttcacccaactgatcaccattctaacaatcattgccctgttgatgctgaggagtatgag
agggccactcgctacaattacacagatgaagaaaaatttgctttgattgaggtcattgcc
atgataaaaggactgcaagtgttaatggcccgtatggagactgtttttcttgattcaatt
cgacgcaatatataccaggaattacaggactttgtgcagctcaccttacgagatcctctt
cgtaaagctatcaaaaacaaaaaagaactactgagaaccatccttgtgtctgtacgggaa
acaagtgcagactggatcaaaggaatagagccttctgaagacccagctctaaagggcaag
aaggatccagataatggttttgagataaaagttcttagaagaaatgttggaccttcttct
acgcagctgtatatggtgcggacaatgttggaatcccttatctcagacaagtctggtgga
aagaagacactacgcaaggagcttgatggccaacatctctgtcaaattgatgagtttcat
aagacgtcatttttttggacttacctattaaatttcagtggtgagaaactcctcttcagg
ggtggattgttctgtaagcctacgtgcacagtggaacaccagcacaatgaggaatgcaaa
gacttggtggtcatggagaagcgtattcagtttcccatcgagatgtccatgccttggatt
cttactgaccatatcctccgcaccaaagatgcttcaatgatggagtgtgtcctgtatcct
ctagatttatacaacgatagtgcatactatgctctaactcagttccgtaagcagtttctt
tatgatgaaattgaggcagaggtcaacctgtgttttgatcagtttgtgttcaagttgtct
gagcaagtcttcgcttattataaacatcttgctggcagtatccttttggacaaacgcttc
cggagtgagtgtagtcaacacaacatgaggattcactatccgcctgcaaataggtatgag
actcttctaaagcagcgccatgttcaacttctcggtcgcagcattgatttaaacaagctt
atttgccagcgtatcaatgcatctatgcacaaatctctggaagtggctatagctcgcttt
gaaggagctgacattacttctgtggtggagctagaaggcttgattgaggttaacaagttg
acccataaactcctcagccagttgttggtattagatgactttgatgcccagctgcgggag
gccaaccacaatgtattagcaccttatggtagaaccactcttcatgtcttctgggagctc
aattatgatttccttcctaattattgctataatgcagcaactggcagatttgttaaggca
gtagtaactacatttgctcagcctgtacagagagacaagccaccaaatgtagctccttac
atggtctggggaagcaaagcacttaatgttgcatatactacaatatactctcagtattca
ggtttccttggtcctccacatctacggtcaattgtgcgtgtactggggtaccaggggatt
gctgtggtgatgcaggagttacttgagattattcattccctcattcaaggaaatattctt
cagttcactaaaacacttcttcaggctatgccaaaacagtgcaaacttcccagatatgac
tatggatctccaggtgtactggggtactaccatgcacagcttaatgacattgtgcagtat
ccagatgcaagggctgaccttttccaccacttcagagaacttggtaatgctctgctcttt
tgtctgttgatagaacaatctctgacacttgaggaagtgtgtgatctcttgcaggcagca
cccttccagaatattttgcctcgaccatactgcaaagagggtgaaaagcctgagactaaa
caaaagcgacttgaagccaagtatgcccctctgcagattgttgcaaacattgaaagactt
gggactgcaaagcaagccatgattgctagagagggggacctgttgacaagagaaaggctg
tgttgtggcctttctatttttgaggtgattttgacgagaattcagtctttcttggaggat
cctatttggcatggatccccacctgccaatggtgtaatgaatgtagatgagtgtactgag
ttccatcgattgtggtctgcactccagtttgttatgtgtatacctgttggagcaaacaac
ttcaccgttgaacagttattcggtgagggtctgaattgggctgggtgctgcatgattgtt
cttttgggtcagcaacgaagatttgaggctcttgatttttgctaccatatccttcgtgtg
caaaaggtagatggcaaggatgaaccaatcaaaggaattcaattgaagaggatgtgtgac
cgcattagaaggtttcaggtgctcaactcacagatatttgcagttcttaacaagtatttg
aaaacaagtgatcctgataatatgcctgtagaacatgtgcggtgtttccagccaccaata
caccaaagtcttgccaaccaaacgtatcagcgaccagaccatttacgctga
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integrated database retrieval system
