Panulirus ornatus (ornate spiny lobster): 139745959
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Entry
139745959 CDS
T10834
Symbol
Csl4
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139745959 (Csl4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139745959 (Csl4)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
139745959 (Csl4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
139745959 (Csl4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
139745959
NCBI-ProteinID:
XP_071512790
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Position
63:complement(5050488..5077646)
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AA seq
195 aa
AA seq
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MKSGNGHIICIPGQRICEASSSHIAGEGTYAFNKYIYASLAGQVTVVPRGDVQVVKVTLG
QQGTVMPEAGSIVTCRVLSVNPSKAIVSIICVGPNKLHTPVSGTIRKQNVRDHQIDTVEM
YDCFRPDDIVLAVVLSLGDMRNYELSTAGTELGVVTAYCEEGHPLVPASWTAMKCKCRTE
RRKVAKVMPPKNANT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctggtaatggtcatataatatgcataccagggcagagaatatgtgaggcaagc
agctcccacatagcaggtgaaggaacttatgctttcaacaaatacatctatgcatctctg
gctgggcaagtcaccgttgtgcctagaggagatgttcaagttgttaaggttactttggga
caacaaggcacagtgatgccagaagctggaagtattgtaacatgtcgtgtattgagtgtc
aacccaagcaaggcaatagtgtccattatttgtgtggggcccaacaaattgcatacacct
gtctctggcaccatcaggaaacaaaatgtccgggatcatcaaatcgatacggtggagatg
tatgactgctttcgtccagatgatattgtcttggcagttgttctctctcttggtgacatg
cggaactatgaactctccactgcaggcactgagctaggggttgtgacggcatattgtgaa
gaaggtcacccattagttcctgcctcttggacagcaatgaagtgcaaatgtcgaacagaa
cgaagaaaagttgctaaagtgatgccaccaaaaaatgcaaatacatga
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