KEGG   Panulirus ornatus (ornate spiny lobster): 139746044
Entry
139746044         CDS       T10834                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
porn  Panulirus ornatus (ornate spiny lobster)
Pathway
porn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:porn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139746044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:porn04121]
    139746044
Enzymes [BR:porn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139746044
Ubiquitin system [BR:porn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    139746044
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     139746044
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd zf-C3HC4_2 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_HPS5 Beta-prop_DCAF4 WD40_like PEP5_VPS11_N Beta-prop_WDR35_TULP_N zf-RING_UBOX zf-RING_2 zf-C3HC4_3 Beta-prop_IFT122_2nd Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_Vps41 zf-C3HC4_4 WD40_RFWD3 Beta-prop_WDR75_1st WDR90_beta-prop_4th zf-RING_5 RING_XB3-XBAT31 Beta-prop_IFT122_1st Beta-prop_SCAP zf-RING_10 Rtf2 zf-rbx1 TRAF3_RING
Other DBs
NCBI-GeneID: 139746044
NCBI-ProteinID: XP_071512964
LinkDB
Position
63:25529237..25635022
AA seq 650 aa
MASSETRLEGSNTRMTGRGVKRAHPVVLNGLEGTAEEKNSDYLCPVCLDLISEAHITKCG
HTFCRGCLVSSIESNKRCPKCNFSVESTDHIFPNHTVNQQILKQRRSADLQAAFTKKNKT
AALSELRNYLSFNSSCLGISDITHIISILQEKKEQLEAASVQNKYELMKDFLSELRKQKE
EQLATVSRELKLITHDLSSVQNTLESVSPFRSSGGCVPLGSSVPNSSGVFLTEILDGDCP
GTSNGTQETQSPTEEGFNVPLFNHAYPESSTVQAKRKRMHLHFEELVERYFSMRVPGFSD
SGVDDDEDDGLEQFGECISKFTQYSAMRPLATINYNCDVFHQSSNIASSIEFDKDSEYFA
VAGLTKKIRIFDYGTVIRDTVDLHYPCSEMSCSSKISCVSWSNYMKHMLASSDYDGTVTV
WDAFTAQRLHVFQEHEKRCWNVDFNKMDTKLIASGSDDHKVKLWSLDNERSLTCLEAKAN
VCCVQFNPSSRYHLAFGSADHCVHYYDLRNMKEAVRVFKGHRKAVSYVKFVSSEDIVSAS
TDSLLKIWNVNKSHCVRSLQGHINEKNFVGLATDGEYVACGSENNSLYVYYKGLSKKLFS
LKFDQKKWVLDPEQKEEESSEFVSAVCWRKGSNIIAAGNSKGIIKILQMV
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggcatcaagtgaaacacggttggaaggctccaacacacgcatgactggtcggggagtt
aagcgtgcccatcctgttgttttaaatggcttggagggaacagcagaggagaagaattca
gactatctgtgccctgtgtgtttggaccttatatctgaggctcatataacaaagtgtggt
catactttctgtcgtgggtgtttagttagtagtatagaatctaacaagcgatgtcccaag
tgcaattttagtgtagaaagtacagatcacatatttccaaatcatactgtaaaccaacaa
atattaaaacaacgtcgttcagctgacttacaggctgcctttacaaaaaagaataagaca
gctgccctcagtgaactccggaattatcttagttttaattcatcttgtttaggaattagt
gatattactcatataataagcatcttacaagagaaaaaggaacagttagaagctgcatca
gtgcaaaataaatatgaactcatgaaggacttcttatcagagttgcgtaagcagaaggaa
gagcagttagctacagtcagtagagaattaaaactcataacacatgatctgtccagtgta
cagaatactcttgaaagtgtttcaccgtttagatcttcaggtggctgtgtaccactagga
agcagtgttccaaactctagtggtgttttcctcactgaaattcttgatggtgattgtcca
ggaacatcaaatggaacccaagagactcagagtccaacagaagaaggctttaatgtccct
ttgttcaatcatgcttatcctgaaagttctactgttcaagccaaacgaaagcgaatgcac
ttacactttgaggagttagtagaacgttactttagtatgcgtgtgcctggcttcagtgac
tctggtgtagatgacgatgaagatgatggccttgagcagtttggggaatgcatttcaaaa
tttactcagtacagtgccatgcgccctttagcaacaattaattacaactgtgatgtgttt
catcagtccagtaacattgcctctagtatagaatttgataaggatagtgaatattttgca
gtggcaggtctcactaaaaagattcgcatatttgactatggtacagtgatacgggatact
gttgatctgcattacccatgttctgaaatgagttgctcttctaaaattagctgtgtgagt
tggagcaactacatgaaacatatgttagcaagtagtgattatgatggtacagttacagta
tgggatgcattcacagctcaaaggcttcatgttttccaggagcatgagaagcgttgctgg
aatgtggatttcaacaaaatggacactaaactcatagcctctggtagtgatgatcacaaa
gtcaaactttggtcactagacaatgagaggtctttgacatgcttagaagcaaaagcgaat
gtgtgctgtgtacaattcaatccttctagtaggtatcatttagcgtttgggtcagctgat
cactgtgtacattactacgacctacggaatatgaaagaagctgtaagagtgtttaaaggt
catcgcaaagctgtgtcttatgtcaaatttgtatcaagtgaagatattgtatcagcctct
acagatagtcttttaaagatttggaatgttaataaatcacattgtgtgcgttctttgcaa
ggacacataaacgagaaaaattttgttggtttggcaaccgatggtgaatatgtagcatgt
ggctcagaaaataattctttatatgtgtattataagggactgtccaaaaagctcttcagt
ctaaaatttgatcagaagaagtgggtgttagaccctgagcaaaaggaggaggaatcctct
gagtttgtgtctgctgtttgttggagaaaaggatccaatataatagcagcaggtaatagt
aaaggcatcatcaaaatactacagatggtctag

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