Panulirus ornatus (ornate spiny lobster): 139746496
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Entry
139746496 CDS
T10834
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139746496
03041 Spliceosome [BR:
porn03041
]
139746496
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
139746496
Spliceosome [BR:
porn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139746496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
139746496
NCBI-ProteinID:
XP_071513887
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All DBs
Position
65:3015895..4476609
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AA seq
433 aa
AA seq
DB search
MNESVICGVSVGVCARVSSAGGALCGRWRHCLESVPPRGVRAYLVIAFVCGHHQNLQEMK
INWATSPGSQGKVDTSKHFHIFVGDLSPEIETHTLREAFAPFGEISDCRVVRDPHTLKSK
GYGFVSFVKKADAETAITNMNGQWIGSRNIRTNWATRKPPAPKNNDANQKPLTFDDVYNQ
SSPTNCTVYCGGITNGLSEELMQKTFAPYGQIHEIRVFKDKGYAFVRFSTKESATHAIVS
VHNSEINGQPVKCSWGKESGDPNNTPVTTQVMTLTDVSECLSLQPLPGSQYPYNYAGQMG
YWYPQGYPPQVQGQQFLGMQGFAYGQYGYQQGMAGMAGVPAWQGVPQPQLPTGQMPQLQQ
PASMVGAYPVQQFQCGQIHGCYPLPVTQPTSFRCSNGGSRNAAVGPPVSSHPPPPPLADG
SFTRCHTELLLTM
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagagtgtcatatgcggtgtgtcggtgggagtgtgtgcacgtgtctcgagtgcg
ggaggagcgttgtgtggaaggtggcgtcattgtctagagtctgttcctccgcgtggcgtt
cgggcgtatctggtcatcgcgttcgtctgcggccaccatcagaatcttcaggaaatgaag
ataaactgggccacgtcaccaggatcacaggggaaagtcgacacaagcaaacactttcac
atcttcgtgggcgacctcagtcctgagatagagacgcacacgctgagagaggcgttcgcg
ccctttggagagatctcagactgtcgtgtggtgcgggaccctcacacactcaagtccaag
ggctatggcttcgtatcgttcgttaaaaaggctgacgcggagacggccatcaccaacatg
aatggtcagtggatcggctcgcggaacatcaggaccaactgggccacgcgcaaaccacca
gctcctaaaaacaatgatgctaatcagaaaccgctaacatttgatgatgtgtacaaccag
tcgtcgcctaccaactgcactgtctactgtgggggcatcaccaacggcttgtcagaggag
ctcatgcagaaaaccttcgcgccttatggacagatacatgagatccgggtcttcaaggac
aaaggctatgcgtttgtgaggttctcaacgaaggaatctgccacccatgccattgtttct
gtgcacaactcagagatcaatggccagccagtcaaatgttcctggggaaaggagtccggc
gaccccaacaacaccccagtcaccactcaggtcatgacgctgaccgatgtgtccgaatgc
ttgtctttgcagccactgccgggatcgcagtacccatacaactacgcgggccagatgggc
tactggtacccacagggctacccgccccaggtgcagggacaacagttcctgggcatgcaa
ggtttcgcctacggacagtatggctaccagcagggtatggcgggtatggcaggtgtacca
gcctggcaaggtgtcccacaaccacagctacccactggacaaatgccacagttgcagcag
ccagcgtcaatggtgggcgcctatcctgtgcagcagtttcagtgtgggcaaattcatggc
tgctatccactccctgtaactcagcccacttctttcaggtgcagtaatggcgggagcagg
aatgctgctgtgggtcctcctgtgtcctctcatcctcctccacctcctctggcggacgga
agcttcacaagatgtcacactgaactcctcctgactatgtga
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