Panulirus ornatus (ornate spiny lobster): 139746527
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Entry
139746527 CDS
T10834
Symbol
HBS1
Name
(RefSeq) protein HBS1 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139746527 (HBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139746527 (HBS1)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139746527 (HBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
AAA_22
Motif
Other DBs
NCBI-GeneID:
139746527
NCBI-ProteinID:
XP_071513951
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Position
65:complement(4637672..4679314)
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AA seq
732 aa
AA seq
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MSRHRDVRKLDYDEEYDEAYDDDVYGHSVDDSDYGVSPGMEQYLYSRSRDNAHGFGLYFP
TGEDIKEEEEAVDGNSEKLGALDRSRHDSSSYKKPPLSPEDEVRLASVLDELQNIFGDQY
SERELTQTVITHKFELDASVNALLNKTSSSSTAQSLPQRQKRARDRGPLTASEGVQQLTL
SQNQHEEYKNELAQNFHKASPQVSKVPSKISTPVVVTTPARSGGTPRVVRGFEVHNAEDG
IAAENNLNQPEQDSKRSRSNTPVRGYKDREKDKDKDTSTLGKTPAKIRDKHVDVLSEYKD
QRGSAKELLNLVVVGHVDAGKSTLMGHLLYLQGSVGQRTMHKYEQESKKVGKQSFMYAWV
LDDTDEERSRGITVDIAQRMFESETKIITLLDAPGHRDFIPNMITGAARADVAILVVDAS
TGEFEAGFESGGQTREHAILIRSLGVSQLVVSVNKLDAAEWREDRFKDIKRNLQQFLKTV
GFKDADVVYIPCSGLTGENLTKPSTEDKLCSWYTGPTLLQAIDKMKVPERGISRPVRMCV
SDVYKGQGSNMCVGGRLETGYIQSNDRLLLLPQGDLLNVKGVQADSSSSSTAFAGDHVTL
TVSGVDPNVLHTGDFLCDPAHPIPLASRVQARIVVFNIIVPLIKGAQVDFHYQAVTEPAK
IRKLVSQLHKTTGQIVKNKPRALVKNTAAVIELEFTRPLCLELFRDNKELGRFMLRTGGS
TIAAGLVTQILA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcatagagatgttaggaaattagattacgatgaagaatatgatgaggcatat
gatgacgatgtttatggccactcagtcgatgacagtgactatggagtgtctcctggaatg
gaacagtatctctatagcagaagccgagacaatgctcatggatttggtttatactttcca
actggagaggatataaaggaagaagaagaagcagttgatggaaactctgaaaagttagga
gccttagacagaagtcggcatgattcctcaagttataagaagccacctttatcccctgag
gatgaggttcgattagcatcagtattagatgagcttcaaaatatttttggtgaccagtac
agtgaaagagaactgacacagacagttatcacccacaaatttgagcttgatgcatctgtg
aatgctctactgaacaaaacctcatcatcctctacagcacaatctctaccacagagacag
aaacgggctagagatagaggacctctaacagcatcagaaggtgttcagcagcttacattg
tctcaaaatcagcatgaagaatataagaatgaattggcacaaaattttcataaagcttca
ccacaagtgtctaaggtaccaagtaaaatttcaactcctgtggttgtgactacaccagca
agaagtggtggcactccacgagtggtgcgtggctttgaagttcacaatgcagaagatggc
atagcagcagaaaacaaccttaatcaacctgaacaggactctaaacgatcacgttctaat
acccctgtgcgtggatataaagacagagagaaggataaggataaagatacatctactttg
ggaaaaactcctgctaaaatcagggacaagcatgtggatgttttgtctgaatacaaggat
cagagagggagtgcgaaggagcttcttaacttggtagttgtaggtcatgttgatgctggc
aagtcaacactaatgggtcatctcttgtatcttcagggtagtgtgggacagagaactatg
cacaagtatgaacaagagagcaagaaagttggcaaacagtccttcatgtatgcatgggtg
ctggatgatactgatgaagagagatcacgtggaattacagtagatattgctcagagaatg
tttgagtcagaaaccaaaattataacactccttgatgctccaggtcatagagactttatc
cctaatatgatcacaggagcagcaagagctgatgttgccattcttgttgttgatgcatcc
actggggaatttgaagcaggatttgaaagcgggggtcagacaagggaacatgccattctt
atacgatctcttggtgtttcacagttagttgtttcagtaaacaaattagatgcagctgaa
tggagggaagaccggttcaaagatataaaacgtaatctgcagcagtttctcaagactgtt
ggtttcaaagatgccgatgtggtgtacattccttgttcaggtcttactggagagaacctt
accaagcccagtacagaagataaattgtgttcttggtatactggcccaacattactacaa
gcaattgataaaatgaaagtaccggaacgaggtatttcacgaccagtgaggatgtgtgtg
agtgatgtatataaaggtcaggggtctaacatgtgtgttggtggaagactagaaactggg
tacattcagagtaatgaccgattactcttacttccacaaggagatttacttaatgtcaaa
ggtgtgcaggcagatagtagctcatcttctacagcttttgctggtgaccatgtaacactg
acagttagtggtgttgaccctaatgtgcttcatactggtgactttttgtgtgatccagcc
catcctatcccacttgcatcgcgagtgcaggctcgtattgttgtgtttaacatcatagtt
cctctgattaaaggagcacaggttgatttccattatcaagcagtgacggaaccagcaaaa
atccggaaattagtgtcccaactgcacaagactactggacagattgtcaagaataaacca
cgagcacttgttaagaacactgctgctgtgatagagttggaattcactcgacctctgtgt
ttagagcttttccgagataacaaggaattaggacgttttatgcttcgaacaggaggctcc
actattgctgctggacttgttacacaaatcctggcctag
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