Panulirus ornatus (ornate spiny lobster): 139746623
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Entry
139746623 CDS
T10834
Name
(RefSeq) exosome complex component RRP41-like isoform X1
KO
K12587
exosome complex component MTR3
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139746623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139746623
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
139746623
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
139746623
NCBI-ProteinID:
XP_071514139
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Position
65:13212446..13233704
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AA seq
287 aa
AA seq
DB search
MEVRELHDKMGTRDSRRIPGPDKSLPYSLLQKYERKSFLGEDRMRRDGRTAVDPRKLFMS
LGVISQAKGSSYLEVGNTKVCCGVYGPMDVQRGSDFKMSCQVVCEVKMAPFSCPVRRSPQ
PDKQQREMSRQLKDALETVIILDKFPKSQIDVYVTVIEDDGGLLAACITAAGLAICHANI
DVYDILIGASLLWHDGILYADPTHDEEENEGSEVHSTVSEGGQLTIGMMPSYANGQVALL
VQCGQISADNLCEGLDAAVEICQRIYTLSRKTLMDYVEQSLIENSGP
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcagagaactgcatgacaaaatgggaactcgtgactcacgtcgcatcccagga
ccggataagagtttgccatattccttgttgcaaaaatatgagaggaagtcttttctggga
gaggatcgtatgcgaagagatggtcgcacagccgttgatcctcgaaaactctttatgagt
ctgggagtgataagtcaagcaaaaggatcatcttatctagaagttgggaacaccaaagtt
tgttgtggcgtatatggacctatggatgtacagagaggttctgacttcaagatgtcatgt
caggttgtatgtgaagttaagatggctccattttcctgccctgtgcgacgatcaccacag
cctgacaaacagcaaagagagatgagcagacagctgaaggatgctttggaaactgtgatt
attcttgacaaattcccaaagtcccagatcgatgtgtatgtcactgtcattgaggatgat
ggagggctgcttgctgcatgcatcactgctgcaggtttagccatctgccatgccaatatt
gatgtctatgatattttaattggagcatcactgttgtggcacgatggtattctgtatgct
gatccgacacacgacgaggaagaaaatgagggtagtgaggttcacagcacagttagtgaa
ggaggtcaactaactattggtatgatgccttcttatgccaatgggcaagttgccctttta
gttcagtgtggtcagatctcagcagataatctttgtgagggactagatgcagctgtggaa
atatgccaaaggatatacactctctcaagaaagaccctgatggattatgttgaacagtcc
cttattgaaaacagtggaccttga
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