Panulirus ornatus (ornate spiny lobster): 139746806
Help
Entry
139746806 CDS
T10834
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03008
Ribosome biogenesis in eukaryotes
porn03013
Nucleocytoplasmic transport
porn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139746806
03015 mRNA surveillance pathway
139746806
03008 Ribosome biogenesis in eukaryotes
139746806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139746806
03009 Ribosome biogenesis [BR:
porn03009
]
139746806
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139746806
mRNA cycle factors
Stress granule specific factors
139746806
Ribosome biogenesis [BR:
porn03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
139746806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
TAP_C
Tap-RNA_bind
NTF2
LRR_4
DNApolII_insertion
LRR_8
LRR_6
UBA_8
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
139746806
NCBI-ProteinID:
XP_071514472
LinkDB
All DBs
Position
66:complement(3882980..3929909)
Genome browser
AA seq
662 aa
AA seq
DB search
MGGRGNRFPPKNVYITAKATGSRQYYEHDDRGSSRSGGGSDGGGGRGSYRTGYRDGGKFR
GGRNWESGWDNDRSSRLPEGHWRGDNRRGAGRGFRSPRVPRYQDETDSLGIKDRNWRQDM
YKARGGRRGRDYKYNRSYQNNPTNTLGWHKILIRDGNTLDKHQVLSEIRSLVQEPFTPFL
FETEGKNLVFYLEDNGPAVHAIIEINRRITMPNGQRLQIWSNRSPPPNRPLPASQAERVT
QVMSDRYSVELKRLDLKNFHNDATLMKEGIFCPLYRQPNMQIIVDIIVSNIPQVEEIDLS
YNKIHGLDELERIVSSCPNLQRLNLGKNKIQNEAALEKLSGLGIIDLTLEGNPLCDKFRD
TETYISAVRKHFTKVIYLDGQELPKPIGFEVDEEITKLPQSCPSYFAIPDVKGLVLQFIE
QYYQIFDTENRRPLEAAYSVNALFSLVCNFPETGPGARYTNIYLTTNRNLKKVTSTDRRQ
KLVYQGRKNIGTFLCQLPYTMHDPLSFTVDVPLTDNKLMVVTLSGVFRQLTDRNPPIRSF
TRTLTIIPEGTGYCICNEQMHLTTATVDQVKKAFKTPVANIPQSNQQIQTAVENVPVVAQ
GVLQPVQEAMIAKFSEISGMLPQYSQLCLEENGWDYNKAGEIFTQLKAENKIPPEYFPQN
PA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggaggccgtgggaataggtttcccccgaaaaatgtgtacattacggcaaaagccact
ggttctcgccaatattatgagcatgatgaccgaggttcttcaagaagtggtggtggcagt
gatggaggtggaggaagaggaagctatagaactgggtaccgggatggtgggaagttcaga
ggaggaaggaactgggagtcaggctgggataatgaccggagttctcgtctcccagaggga
cattggcgtggagacaacaggagaggagctggacggggattccgttcaccccgagtaccc
agatatcaggatgaaactgattcattgggcatcaaggacagaaattggcgacaagacatg
tacaaagcccgtggaggacgccgggggagagattataagtacaaccggagctaccagaac
aatcccacgaacactcttggatggcataaaattcttatacgagatggcaacactttagac
aaacatcaagttcttagtgaaatacgttctcttgtacaagagccattcactcccttcctg
tttgaaactgaaggaaagaacctggttttttatctagaagataatggccctgctgttcat
gcaattattgaaattaaccgaagaatcacaatgcctaatggccagcgactccagatatgg
agtaacagatctcctcctccaaataggccacttcctgcatctcaggctgaaagggtgaca
caggtcatgagtgatcggtattcagtggaactgaaacggctagatcttaaaaacttccac
aatgatgccaccttgatgaaagagggtatcttctgtcccttataccgtcagccaaacatg
cagattatagtggatattattgttagtaatattccacaagttgaagaaattgaccttagc
tacaacaagatccatggcctagatgaattagaacgcattgtatcctcctgcccaaatctt
cagagactcaacttggggaaaaacaagattcaaaatgaggctgccctggaaaagctctca
ggacttggtatcatagatttgactctggaaggaaatcctctttgtgacaagtttcgagat
acagagacatacatcagtgctgtgaggaaacacttcaccaaagttatatacttggatggc
caagaacttccaaaacccattgggtttgaagtagatgaagagattaccaagctcccacag
tcttgcccctcctattttgccatacctgatgttaagggccttgtgttgcagttcattgag
caatactatcagatatttgacactgagaacagaagaccgctagaagctgcatattcagtt
aatgcattgttttccttggtctgcaacttcccagaaactggaccaggtgcccggtacaca
aatatctacttaacaacaaatagaaatttgaagaaagtgacatcaactgaccggagacaa
aagctggtgtatcaggggcgtaagaacattggtacctttctttgccagctcccatacacc
atgcatgatcctttgtccttcactgtggatgttccattgacagacaacaagctgatggtt
gtgacgcttagtggggttttccgtcagttgacagatcgaaatccccctattcgctcattc
acacgcaccttaacaatcattccagaaggaactggctattgtatctgtaatgagcagatg
catcttacaacagctactgttgatcaagttaagaaagccttcaagactccagtggcaaat
atacctcagtcaaaccagcagatacagacagctgtagaaaatgttccagttgttgcacag
ggtgtacttcagccagtccaagaagctatgatagccaaattttctgagatatcaggaatg
ttgcctcagtattcacagttatgcctggaggagaatgggtgggactacaacaaagctgga
gagatttttacacagttgaaggctgaaaataagatcccaccagagtattttccccaaaat
cctgcctaa
DBGET
integrated database retrieval system
