Panulirus ornatus (ornate spiny lobster): 139746894
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Entry
139746894 CDS
T10834
Symbol
Dcr-1
Name
(RefSeq) endoribonuclease Dcr-1 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
porn03036
]
139746894 (Dcr-1)
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
139746894 (Dcr-1)
microRNA pathway
RISC loading complex
139746894 (Dcr-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
dsrm
DUF7232
Motif
Other DBs
NCBI-GeneID:
139746894
NCBI-ProteinID:
XP_071514661
LinkDB
All DBs
Position
66:complement(19658438..19738487)
Genome browser
AA seq
2529 aa
AA seq
DB search
MMNRVQPENVHSTIFTPREYQVELVDACLRRNTLSVLASRSTRTFLITMVTRELAHLTRS
REQGGKGQRTLITGWSGPGLVRAGEAIQQNTNLVVTTYTALDQVENWPPARWSQAFREAQ
VLIMTVDVLEEGLEAGVLSLDMLNLLVITDAHRMATCSTIDKVLSRCGKCRILGMTSPVL
SHACSPPQLESFLNHLQKASSCRVDTASEIVTVLRYVNKPVEKIVMCRDPSPDERLEVEL
EVRRLVSDALGFLDDHRYDLVEVYGPEYKEFCDGLPDPNNEPRQILMDFLDVLNNLGLWC
ADRAALYALVEVEKLKKKTAYDRHYLLLCMIFTVMARIRAVVEQAFDKYSELDQILKFST
PKVLRLVEILRQVRPLNFVDPRKRRDKLENTEITKAETIFEGLEAGKYETVLEVNEIALQ
ASVEIGEELQNQIVEGKSNLPINPSLDAPVDLDVTINQEQNCSIPIEKTEDSTLGLTSEE
LSDEPTIENSHGTDFGSSFENVKADTKLESEYLSTTVPKSFVTDTQLHNCILSESAHISC
GELTADFSGSAANNSDILLGLPERRAVKEMKVCDKSLCNVVCNSVSEDMSKSDDTSADRE
SCELVSNLSPECTIKAVSESYTNDLGCYPNGIDYAECKVPLSESLEESITNDFDKGNTRC
VHFQNGIKEVEDQHVQKGNSVFIDGMQSTVQTHPDTTQTCCNICEAVVHKETEDGSVLED
DLCRLNIKESSYIDGCELGILTSCDQRNGTLSAKSEQKDSAMKQNIRNTILCNGFTHDSD
NGLPSPRTTQRNIESKLNGQIDQHKLKSKCKCASDRECVAKAGNKSCDSVQNQFCMEACQ
EKDSITETSAPLATSELPCEAVTAVATHVNITSSDSEVRVEESVVPIDFSNNSQVNCVLL
SDSSKFTPEPKATTTGVTNLPNNSCNGLNSSNETDGSGSSVPLASSEAAAMADTLALLLP
GGGKGRKRRDDVKEKVKVHNPEDPDSVCGLIFVHHRNIAKIIYRLLKELSDIGGDFAWIF
PQYTVEAKESMKEDPRAAEAEHKKQEEVLRRFRHHECNVLVSTRVLEEGIDVPQCNLVLR
FDPPIDYRSYVHSCGRARGLDTFYFHLITKKQEQSFLRDMATYSAFQQVLVSRCGSVEVG
TDQEVMASEANASYPPYITPANAAVTMASAIGLLNKYCAKLPSDTFTRLTAMWEIEERQD
DLCRYRCKIMLPINSPLKGTVQGPWQEKVSLAKMSAALECCHRLHHIGELDDQLQPVGKE
SMKLDDHLCAPPADDQVPEGMPRPGTTKRRQYYYKKVAECLTGEQPKEELDLFVYKLDMV
LTCPIPDEQNTRGRKIYRPEKSSRSFGIVTTKPIPQVSGFPVFTRSGEVVVHVCEIASRE
HFNQDQLLALQCFHKFTFTHVLRLEKYPIKFDPTNARTAFYIVPLNKFDKNESIDWEFVQ
KIQLEGDPRPVPPLDAARKKFQFQRGLYEDAVVMPWYRNQDQPQYFYVAEICTHLNPQSD
FPDAGFETFEKYYLTKYGLQICNLSQPLLDVDHTSGRLNLLTPRHVNRKGVALPTTSEET
KRAKRENLQQKQILVPELCTIHPFPASLWRKAVCLPTILYRINALLLADQLRICVASEVG
LGLKNLPAGFSWPPLDFGWSLADVLKKNQSNQEQENSEPKTEAATKRKVKKVESLGDESP
LSKKKITKNGIDMEIGTWSNDMAVDPPTPPYSLDDVNTADDFEIDTFDPNVALPDNLTLL
DGFTNADDDIEGELGADWGTGLTERRSKNGCQKDSSGEVFRVGSPSNFEIDGWDMFGGSN
SSVYGGNYGGYGSYDAYGGYGDFQGLADDLEGCESDVSSDMDDDDKSQTEKLWDEEGSKR
RASMAIDEGSSDEEIDLQWPYENDDVRSEKEEEFQQFLKEKQSTILESPCYLTENESLVI
EKAHRKLAGENKTVSPERESLHREKFAVQGCEHLSSKGCDNAQQSTSLTTRIVNRIETLS
LVKLDDGAETSSWKGNCGETSFSFDSQPDLIDHPGPPPSVILQALTMSNANDGVNLERLE
TIGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVSNLNLYRLGKRKGLGECMVATKFEP
HDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPGLHDLASDEIRRLVQERSEQIKRSK
TEQVTNELMATQNPHDLPIFIPYNLLTQHSIPDKSIADCVEALIGAYLTTCGPRGALLFM
SWLGIKVLPCNIDEGLENVWQVTYGHLEPPQSPLHHCPVTDTHTQLELLLSGYKVFEDKI
GYMFQDRSYLLQAFTHASYYKNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALT
DLRSALVNNTIFASLAVKYDFHKYFRHFSPGLDRVVRDFVKMQEENGHKINEEYYFMEED
ECEAAEDIEVPKALGDVFESVAGAIFLDSGGSLDAVWSVYYTMMCHEIEQFSGVVPKSPI
RELLEMEPETAKFGKPERLVDGKVRVSVEIFGKGSFSGVGRNYRIAKSTAAKRALRHLKK
LQMIANQGL
NT seq
7590 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccgagtacaaccagaaaatgttcactctaccatatttactcctcgggagtac
caggtggagctggtggatgcttgcctacgacgaaacactctgtctgtattggcttctcgc
tccactcggacattcctcatcaccatggtaacccgagagttagctcacctcacccgcagc
agagaacaaggaggcaaggggcaacgaactttaatcacagggtggtcaggaccaggcctt
gttcgtgcaggggaagctatacagcaaaacaccaaccttgttgtcaccacctacactgct
ctagaccaagttgagaattggcctcctgctcgttggagtcaagccttcagagaggctcag
gtattgataatgacggtggatgtgcttgaggaaggactggaagcaggagtgctttcactg
gacatgctcaaccttcttgtcattactgatgctcaccgaatggctacttgttcgacaatt
gataaggttctgagtagatgcggaaaatgtcgtatcctaggcatgacttctcctgtgttg
agtcatgcttgctctccacctcagcttgaatccttcctcaaccacctccagaaagcttct
tcatgtagagttgacactgcctcagaaatagtcacagtcctaaggtatgtaaataagcca
gttgagaaaattgtgatgtgtcgtgatccttctccggatgaacggttggaggtagagctg
gaagtacgtcgtttagtttcagatgcccttggatttcttgatgaccatcgctatgatctt
gtggaagtttatgggccagagtataaggaattttgtgatggattacctgaccccaataat
gaaccaaggcaaatcctgatggacttcctggatgtgctcaataatttagggctttggtgt
gctgatagagcagctttatatgccttagttgaggtggaaaagttgaagaagaaaacagca
tatgatcgtcactacctcctgctctgcatgatcttcactgtaatggcacgaatcagggct
gtagtagaacaagcatttgataagtactcagaattggatcagatcttaaagttttcaact
ccaaaagtcctacggttagttgaaatccttcgtcaggtgcggccactcaattttgtagat
ccacgcaaaaggagagataaattggaaaatactgaaattaccaaagctgaaactatattt
gaaggattagaagctggaaaatatgaaactgtacttgaagtgaatgaaatagctctgcag
gcttcagtggaaattggggaggaattacaaaatcagattgtggaagggaaatctaacttg
ccaattaatccctcattagatgcaccggtagacttggatgtaaccataaatcaggaacaa
aactgcagcataccaatagaaaaaactgaagattctactcttggattaacttcagaagaa
ctgagtgatgaaccaactattgaaaattctcatggtactgattttggaagcagttttgaa
aatgttaaagctgatacaaaattagagagtgaatatctaagtacgacagttcctaagtca
tttgttacagatactcagttacataattgcatcttaagtgagagtgcacacatatcttgt
ggtgaattgactgctgatttttcaggttctgctgctaataactctgatattttattggga
ttacctgaacgaagggctgttaaggagatgaaagtgtgtgataaatccctctgtaatgtt
gtatgtaattcagttagtgaagatatgagcaaaagtgatgatacttcagctgacagagaa
tcctgtgaacttgtctcaaatttatcaccagaatgtacaatcaaggctgtgtctgaatca
tatacaaatgatttagggtgttatcctaatggaatagattatgctgaatgcaaggtacct
ctttcagaatcattggaagaaagtatcacaaatgactttgacaaaggaaataccaggtgt
gttcattttcaaaatggtattaaggaagtagaagatcaacatgtacagaaagggaacagt
gtgtttatagatggtatgcaaagtacagtacaaactcatcctgatactacacaaacctgt
tgcaatatatgtgaagcagtagtacataaggaaactgaagatgggtcagttctagaagac
gatttatgtaggcttaatattaaggaatcatcatatattgatggctgtgaactaggaatc
ttaacaagctgtgatcaacgtaatggaactctgagtgccaaaagtgaacagaaagatagt
gctatgaaacaaaatattagaaatacaattctatgcaatggattcacgcatgacagcgac
aatgggttgccatctcctagaaccacacagaggaatattgaaagcaaactgaatggacag
attgatcaacataagcttaagtcaaaatgtaaatgcgcaagtgatagagaatgtgtagca
aaggcaggtaataaaagctgtgactcagtacaaaaccagttttgcatggaagcttgtcaa
gaaaaagattccatcactgaaacctctgctccccttgctacctccgagctgccttgtgag
gcagttactgctgttgctactcatgtcaatatcacaagttctgacagtgaagtgagggtt
gaggaaagtgttgttccaattgatttttcaaataactcacaagtaaactgtgttttgttg
tcagactcttctaaatttactccagaaccaaaggcaaccacaacaggtgtaacaaacctc
ccaaacaactcttgtaatggcctgaattcaagcaatgaaacagatggcagtgggtcatct
gttcctttagcatcatcagaagcagcagctatggctgacaccttggcattgctccttcct
ggtggtggcaaggggcgtaaacgacgagatgatgtgaaggagaaggtgaaagtccacaat
cctgaggatccagactctgtgtgtggactaatatttgtgcatcatcgcaacatagcaaaa
attatatatagactcctaaaggagctaagtgatataggtggtgattttgcttggatcttc
ccacaatatactgtagaagccaaggaaagtatgaaggaagacccaagggcggctgaagca
gaacacaagaagcaagaggaagtactcagacggtttcgccatcatgaatgcaatgtgcta
gtatccactcgtgtgcttgaagaaggcattgatgttcctcagtgcaatcttgtcttacgg
tttgatccccccattgactatcgttcatatgtacatagctgtgggcgggcaaggggcctt
gatactttttattttcatttgattaccaagaagcaagagcaaagttttcttcgtgatatg
gcaacatactctgcctttcaacaggtgctggtgagtcgatgtgggagtgttgaagtgggc
acagaccaggaggttatggcaagtgaagctaatgcttcttaccctccttatatcactcct
gccaatgcagctgttaccatggcttctgcaataggccttcttaacaaatattgtgccaaa
ctgccaagtgacacctttactcgactgacagccatgtgggaaattgaggagaggcaagat
gatctttgcagatatcgttgcaagattatgttaccaattaattcacccttgaaaggaact
gtccagggtccttggcaagaaaaggtttccttggctaaaatgtctgctgctcttgaatgt
tgccatcgtctccatcatattggggaattagatgatcagctacagccagttggaaaggaa
agtatgaaacttgatgaccacctttgtgcaccacctgcagatgaccaggtaccagagggg
atgcctcgtccaggaacaaccaagagacgtcagtattactataagaaggttgctgaatgc
ttgacaggagaacaaccaaaggaggaactagatctgtttgtgtataagttagatatggta
ttgacgtgccctattccggatgagcagaacacccgtggtcgcaagatatatcgcccagag
aagtcttcacgatcatttggtattgttaccacaaaacccatcccacaggttagtggtttt
ccagtgtttactcgatcaggtgaagttgtcgtccatgtatgtgaaattgcaagtagggag
cactttaaccaagatcagctcttagccttgcagtgtttccacaagtttaccttcacacat
gtattgcgcctggagaaatatcccattaagtttgacccaactaatgcaaggacagccttc
tacattgtaccactgaataagtttgacaaaaatgagagcattgactgggaatttgtccag
aagatccagttagagggggatccaaggccagttcctcctcttgatgctgcaaggaagaag
ttccagttccagcgtggcttatatgaagatgctgtggttatgccatggtacagaaatcaa
gatcaaccccagtacttctatgtggcagaaatctgcactcacctcaacccacagagtgat
ttcccagatgctggatttgaaacttttgagaaatactatctgactaagtatggccttcag
atttgtaatttgtctcaaccattgcttgatgttgaccacacatctggccgtctcaacctg
ctcactccaagacatgtcaataggaaaggtgttgcacttcccactacctcagaggagacc
aagcgtgcaaaacgagagaatttgcagcaaaaacagatcttggtgcctgagctgtgtaca
atccatcccttcccagcctctttgtggcgcaaggcagtgtgtctcccaaccattctctac
cgtataaatgcactgcttttggctgaccagttgcgaatctgtgtggctagtgaagtaggc
cttggattaaagaacctccctgcaggcttctcatggccacccttggactttggctggagt
cttgctgatgttctgaagaagaatcaaagcaaccaagagcaggagaatagtgaaccaaag
acagaggctgctaccaagcgaaaagtaaagaaagtggaatcattgggtgatgaatcacct
ctctcaaagaaaaagatcaccaagaatggtattgatatggaaataggtacctggtccaat
gacatggctgtagatccccctactcctccatacagtttggatgatgtgaatacagcagat
gactttgagattgatacttttgatccaaatgtagcccttccagataatctaactttgcta
gatgggtttacaaatgctgatgatgacatagaaggtgaattaggtgctgattggggcact
ggactcacagaacgaaggtcaaaaaatgggtgtcagaaggatagtagtggagaggttttt
agagttggttcaccttcaaactttgaaattgatggatgggatatgtttggtgggtctaat
agttcagtttatggtggaaattatggtggttatggttcttatgatgcctatggagggtat
ggagacttccagggcttggcagatgacttggaaggctgtgaatcagatgtttcatcagat
atggatgatgatgataaaagtcaaacagagaaattatgggacgaggaaggtagtaaaaga
cgggcaagtatggctattgatgaaggttcctctgatgaggaaattgacttacagtggccc
tatgaaaatgatgatgtgagatcagaaaaagaggaggaatttcaacagttcctgaaggaa
aaacagagcacaatattagaaagcccctgttacctgactgaaaatgaatcgctggtgata
gagaaggcacacaggaagttagcaggtgaaaataaaactgtgtctccagagagagagagt
ttacatagagaaaaatttgcagtacaaggctgtgaacacctatcttcaaaaggctgtgat
aatgctcaacaatctacctcactcaccactaggattgtgaatcgtattgaaactctttct
cttgtgaagttagatgatggtgctgaaacttcctcttggaagggcaactgtggtgaaact
tccttcagttttgattcccaaccagatctcatagaccatcctggtccacctcctagtgtc
atccttcaggcactaacaatgtccaatgccaatgatggtgttaatttagagaggctggag
actattggggactctttcctcaagtatgccatcaccacattcctttactgtacttatcca
caacgccatgagggcaagcttagttatctacgttccaagcaagttagcaacctaaatttg
tatcgtttaggtaagcgaaaaggtcttggggagtgtatggtagcaactaagtttgagcca
catgacaactggctgcctcctggttactttgtgccacgtgagttagaagaagctttgatt
gactctggagtcccagcaggtcactggaatatggctgatttacctgggcttcatgatttg
gcgagtgatgagataaggcgtttagttcaagaacgctcagagcaaataaaacgaagcaaa
actgagcaggtaactaatgaactaatggccacacagaatccacatgatttgcccatcttc
attccatacaatttgctcacacagcatagtatcccagacaaaagtattgcagattgtgtt
gaggctcttataggtgcttacttgacaacctgtggtccccgtggtgctttactttttatg
tcttggcttgggattaaggttttaccttgtaacatagatgaggggcttgaaaatgtgtgg
caggttacttatggtcatttggaacctccccagtcacctcttcatcactgcccagtaact
gatactcatacacagttggagttactcctcagcggatacaaggtgtttgaggacaagatt
ggatacatgtttcaggaccgttcatatttgctgcaagcctttacccatgcttcatactac
aagaatcgtctgactgattgttaccaaaggcttgagttcttaggagatgccgttctagat
tacctgataactcggcacctgtatgaggataagaggcagcattctcctggtgctttgaca
gacctgcgctcagccctggttaataacacaatttttgcctctcttgctgtcaagtatgac
tttcacaaatactttcgtcacttttcaccgggtctggaccgtgtggtgagggattttgtc
aaaatgcaagaggaaaatggccataagatcaatgaggagtattacttcatggaagaagat
gagtgtgaggcagcagaagacattgaagttcctaaagctttaggtgatgtatttgagagt
gtagctggggcaatcttcttagactctggtggctcccttgatgcagtgtggtctgtctac
tacaccatgatgtgtcatgagatagagcagttcagtggtgtagtacccaagtctcccatc
cgtgaattgttggaaatggaacctgagacagctaagtttggtaagccagaacgcttggtt
gatggcaaggtcagggtttcagttgagatatttggcaaggggtctttctcaggagttggt
cgtaattatcgtatagccaagtcaactgcagcaaaacgagcattacgacatcttaagaaa
ctacagatgattgctaaccaaggtctctga
DBGET
integrated database retrieval system
