Panulirus ornatus (ornate spiny lobster): 139747233
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Entry
139747233 CDS
T10834
Symbol
U2af38
Name
(RefSeq) splicing factor U2AF 26 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139747233 (U2af38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
porn03041
]
139747233 (U2af38)
Spliceosome [BR:
porn03041
]
Complex A
U2 snRNP components
U2 related factors
139747233 (U2af38)
Complex B
139747233 (U2af38)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
139747233
NCBI-ProteinID:
XP_071515377
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Position
68:27252650..27490721
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AA seq
249 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLILNLYCNPQNSAK
SADGSHSTVSDEEMQEHYDNFFEEVFTECEDRYGEIEEMNVCDNLGDHLVGNVYIKFKYE
EDAEKAVVDLNNRWFGGRAINAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE
LRRELYSRKRRRSRGRSRRRRSRSRSRRSRSRSRSREPRREYRDNSTSLERYRSHSQDKD
QREGRFGRF
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtatcttgcatcgatttttggcactgaaaaggataaggtcaactgcagtttc
tacttcaaaatcggcgcttgccgtcatggagatcgttgttcaagaattcataataagcca
actttcagtcagacggtactcatcctcaacctgtactgcaacccccagaactcggctaaa
tcagctgatggatcacactccacagttagtgatgaagagatgcaagaacactacgacaat
ttttttgaggaggtatttacagaatgcgaggatcgctatggggagattgaggagatgaac
gtatgtgataatcttggtgaccacttggtgggcaatgtatacattaagttcaaatatgaa
gaggatgcagagaaggcagtggtagacttaaataatcgatggtttggaggacgagccatc
aatgctgaactgagccctgtaacagatttccgtgaggcctgctgccgccaatatgaaatg
ggagaatgtactcgcagtggattctgcaatttcatgcatctgaaaccaatatcaagagag
ctgcgtagggagctttatagccgcaagaggaggaggtcaagaggtagaagtcgccgacgt
agatctcgttctcggagccgaaggtcaaggtctcgctccagatctagggagcctagacgg
gaatacagggataattcaacttcattggaaagataccgttcacattctcaagataaagac
caacgagaaggcagatttggtcgattctag
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