Panulirus ornatus (ornate spiny lobster): 139747244
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Entry
139747244 CDS
T10834
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04140
Autophagy - animal
porn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139747244
04148 Efferocytosis
139747244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
porn04131
]
139747244
Membrane trafficking [BR:
porn04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
139747244
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
Clathrin
TPR_Vps41
Beta-prop_RIG_2nd
Lgl_C
Motif
Other DBs
NCBI-GeneID:
139747244
NCBI-ProteinID:
XP_071515409
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Position
68:10335032..10360874
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AA seq
876 aa
AA seq
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MHDAYEAIPILEKLPLQIEAVTAYDGNLVVGTRQGHLLMYTVTPGTTRRWDVALLCSNKN
FSRKPIVQVAVIPEHQIIVSLSDNVVSVHDLTVFNLPLLCTMTQTKGATAFDLDIKHHVS
LTGDAVVTVRLVVAVRRKLQLFYWKARKFHQLREDLALPDVPRALTWCMEAIAVAFKHEY
WLVKLTGEQKELFATGRSQEPLITRMVDGEQLALAHDKETIFVNAAGNATCSYTLKWVEQ
PLALAYDKPYLIAILSKTIEIKTTEPQITVQVLNLDKPKLLVVGHSTKGKSQVYVASTSH
VWCLHTIPISQQIPQLLAEKQFGLALKLVDVWDEAEDAKNQMQKHIQHLQAIHLFCSKKY
PEAMELFFSLNTDLPFVIGMFPDMVPEEYRSRLRYPYPIPVLSGTDLEQALQSLVHFLLQ
IRPQLSISDSRLRTEDSTDSNFSSAAASLKSRNEKLQIIDTTLLKCYLQTNDSLVQPLLQ
KRDSRVSVVEGERVLRHAHKYAELVILLQTRGLHQRALQLLIRHAKRPDSPLIGHHHTVA
YLQNLGPEHIDLIFEYGGWVLKLHPEDGLKIFIGDKSSLGEVDQLPRPKILNFLKKTEKS
LVIPYLEHVIEEWGDTTPLLHNELIHQYRDLITAPHLSSDPADVEEEKGRRKIVHEKLLK
FLNRSEYYTAATLLVHFPYDSLHEERAVLLGRLSQHHQALSIYINTLRDTQAALSYCQKH
YTASGSGSEVYLMLLKLLVSPVEGKSPAGSPLKQQQTKQLDVETILELLQNYLHCIDLGQ
ALKVLPDEVTVQLLKPFIHASLNCASTVCRQKQIARGLTQSLKLQTSEELVACQRLKILL
SEYTYCAVCSKRFTKHSAFAWYPNGDIVHFSCQNQR
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgcatatgaggctattcccattttggaaaaactcccattgcagattgaagcc
gtcactgcctatgatgggaacttggtggtgggcacgagacagggccatcttctcatgtac
actgtaacaccaggcaccactcgtcgctgggatgttgcacttctctgctccaacaaaaat
ttttcacgtaaaccgattgttcaggtggcagtgattccagaacaccagattattgtttca
ttatcagataatgtagtaagtgttcatgatctgaccgtcttcaatttacctcttctctgc
acaatgactcagacaaaaggtgctactgcctttgatcttgatataaagcatcatgtttca
ttgactggggatgcagtagtgacagtgcgtttggttgtggctgtgagacgtaagctccaa
cttttctattggaaggctagaaaatttcaccagcttcgtgaggatttggcattacctgat
gtgccacgggcattaacatggtgcatggaggctatagccgttgcttttaaacatgagtac
tggcttgtcaagcttacgggtgaacagaaagagttatttgccactggtcgcagtcaagaa
ccactaatcactcggatggtagatggagaacagttagccctagctcatgataaagaaacc
atttttgttaatgctgctggcaatgctacatgtagttatactctgaagtgggttgaacag
ccacttgccttagcatatgacaaaccatatttgattgccatcttgtcaaaaacaatagaa
atcaagaccacagaacctcagattactgtgcaagttctcaatttggataaaccaaaactt
cttgtagtgggacactcaaccaaagggaagagtcaggtttatgttgcatcaacatctcat
gtgtggtgtttgcatacgatccccatcagtcaacagattccacaacttcttgcagaaaaa
caatttgggttggccttaaaacttgtggatgtatgggatgaagctgaagatgccaaaaat
cagatgcagaaacatatccagcacctacaagctattcatcttttttgcagtaaaaaatac
ccagaggccatggaactttttttctctcttaacacagatcttccctttgttattggcatg
tttccggatatggtaccagaggagtaccgcagccgactccgatacccatatcctattcct
gtactgagtggaacagatttggagcaagccctccagtctttagttcactttctcctacag
atacgaccacagctgtctattagtgatagcagacttagaactgaggattccactgacagc
aatttttcatcagctgcagcaagtttaaagtctcgaaatgaaaagctccagattattgac
acaacattattaaaatgttacttgcagaccaatgacagtcttgtgcagccccttcttcaa
aaacgagatagtcgagttagtgtggtggaaggtgaacgtgttttgcggcatgctcacaaa
tatgctgaactagtaatattgctccagactcgtggacttcaccaacgagctcttcaactc
ctgatccgtcatgctaaaagaccagattcaccactgattggccaccaccacactgtggct
tacctccagaatctaggacctgaacatatagatctaatttttgagtatgggggctgggtg
ttaaaattacatccagaagatgggctcaagatttttattggtgacaagtcttcattagga
gaggtggatcagctgccacgacctaaaatactcaactttttaaagaaaacggagaaatct
cttgtcattccctatttggaacatgtgattgaagaatggggtgacaccacacctctttta
cacaatgagctgatacaccagtatcgagatctgataactgcaccccacctttctagtgat
ccagctgatgtagaggaggaaaagggaagaagaaaaattgttcatgagaaacttctgaaa
ttcttgaatagatctgaatattacacagctgcaaccctgctggttcatttcccttatgac
agtcttcatgaagagagagctgtgctgctgggtcgcctcagtcagcaccatcaggcactc
agtatctacattaacacacttagagatacacaagctgcacttagctactgccagaaacac
tacactgcttctggatctggaagtgaggtatacttgatgctcctgaaactacttgttagc
cctgtggagggaaaaagtcctgctggatctccgctgaagcagcaacagacaaaacaatta
gatgtagaaactattcttgaacttttacagaattatctgcattgtatagatcttggccag
gctctgaaagttttaccagatgaggtaacagtccagttgttgaagccatttatacatgca
tcattgaactgtgctagcactgtctgcagacaaaagcaaatagctcgtggtctcacacag
tcactcaaactccagactagtgaggaacttgttgcctgccaaagactgaagatcttgtta
tcagaatacacttattgtgcagtatgtagcaagagatttactaaacatagtgcttttgct
tggtatcctaatggagacattgtccacttttcatgccaaaaccagaggtaa
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