Panulirus ornatus (ornate spiny lobster): 139747307
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Entry
139747307 CDS
T10834
Symbol
Caper
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
porn03041
]
139747307 (Caper)
Spliceosome [BR:
porn03041
]
Common components
Common spliceosomal components
General mRNP proteins
139747307 (Caper)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
139747307
NCBI-ProteinID:
XP_071515551
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All DBs
Position
68:complement(10149159..10192873)
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AA seq
594 aa
AA seq
DB search
MCCILMQYNFTWRQGSSLKFAFCRRPCLGWTLRIERHQDGGSSSADARPKENGHTSSKDR
KDKDKDRDRDRERDRDRDRDRDRDKDKERKDKDRVKDRDKDRDRDRDKDRERDKDRDRDK
DKDKDKDRRRRSRSKSRDRDRKKKARSSSRDKDRRKRSRSRSKDRDRKKKSRSRSRDKRR
KSRSKDRRRSKSRSRDRRRSRSRSRDRRRRSRSRERRRSRSREHRRSRSRSKTPKQELSV
EERDARTVFCMQLSSRIRSRDLEDFFSVVGKVNDVRIITDTKTRRSKGIAYVEFCDVESV
PLALGLSGQKILGVPIVCQPTQAEKNRAASTAAVQDQKAASGPMRLYVGSLHFNITEDML
RGIFEPFGKIDHIQLIMDSETGRSKGYGFITFHNSDDAKKALEQLNGFELAGRPMKVNHV
TERSETQQGSSLLDSDEMERAGIDLGATGRLQLMAKLAEGTGLQLPAAAANALHMPAQPQ
QQPAPPIATQCFLLSNMFDPSTESNPNWADEIKDDVLEECNKHGGVLHIFVDRQSSQGNV
YVKCPTIATAAASVNALHGRWFAGKMITAAYVPVMSYHSLFPEAMTASQLIYPR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgtatattgatgcaatataacttcacatggcgtcaaggctccagtctaaagttt
gcgttttgcaggcggccgtgccttggttggaccctacggatagagagacatcaggacgga
ggcagttcatcagcagacgccagaccaaaggaaaatggacacacctcttctaaggacagg
aaagacaaggacaaggatagagatagggacagggaaagggacagggacagggacagagac
agagacagagataaagataaagaaagaaaagataaggatagagttaaagacagagataaa
gacagggacagggacagagacaaggacagagagagggacaaggacagagacagagacaaa
gacaaggataaggataaggataggaggaggagatcccgtagcaagtcacgtgatcgagac
cgcaagaagaaagctcgaagcagttctcgtgataaggatcggaggaagaggtctcgctcc
cgttctaaagatcgggatcgcaaaaagaagtctcgttctcgttctcgtgacaaacgccgt
aaatcaagatctaaggaccgtcgccgcagcaagagccgtagtcgtgatcgtcgccgcagc
aggagtcgtagtcgtgatcgccgtcgcagaagtcgtagccgtgaacgtagacgtagtcgt
agtagagaacatagacgctccaggtctagaagcaaaacaccaaagcaggagttgtctgtt
gaggagagagatgcacgcaccgtgttttgcatgcagctgtcttctcgcatccggtcacgt
gatttggaggacttcttctctgttgtggggaaagtgaatgatgttcgtatcattacagat
acaaaaactcgcagatcaaagggaatagcatatgttgagttttgtgatgtagaatcagtg
ccattggcactgggattgtcaggccagaagattcttggtgtacccattgtatgccagcca
actcaagcagagaaaaaccgtgcagcatcaactgctgctgtacaggaccaaaaagctgct
tcaggcccaatgagactgtatgtgggttctttgcatttcaatattacagaggacatgctt
agaggcatctttgaaccctttggaaaaatagatcacattcagcttataatggattcagaa
actggaagatcaaaaggatatgggttcattacattccataattctgatgatgccaaaaag
gcattagaacaactgaatggctttgagctagctggtcgacccatgaaagtaaatcatgtt
acagaacgttcagaaacgcagcagggatcatcgcttcttgattcagatgaaatggagagg
gcaggcattgatttaggtgcaactggacgtcttcagctaatggcaaagttggcagagggc
actggtcttcagcttccagctgcagctgcaaatgctctacacatgccagctcagcctcag
cagcagccagcaccgccaattgctactcagtgcttccttctctccaatatgtttgatcct
tccacagaatcaaatcctaattgggcagatgaaattaaagatgatgttttagaggagtgc
aacaagcatggtggtgtattgcatatatttgtggatagacaatcttcccaaggtaatgtc
tatgtcaagtgccctacgatagcaacagcagctgcgtctgtgaatgctcttcatggacga
tggtttgctggtaagatgataactgctgcatatgtgccagttatgagttaccattccctt
ttcccagaagccatgacagcatcacaacttatttatcctcgatga
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