Panulirus ornatus (ornate spiny lobster): 139747334
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Entry
139747334 CDS
T10834
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139747334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139747334
Enzymes [BR:
porn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
139747334
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139747334
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139747334
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
MINAR1_C
Motif
Other DBs
NCBI-GeneID:
139747334
NCBI-ProteinID:
XP_071515620
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Position
68:10517424..10701255
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AA seq
821 aa
AA seq
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MHDVDRYRGSCLIVSKPRGGRGNPRGRRPAQDTSQQQQHGGTHPSAMDSPGGTGYLMEGG
SALAGMPLFSFLPQRRGPARAHQGRPQQQRAQTSATHYHHNMKDRESPPEGEPRDRPDLI
AATTDEADEVERLPLARLALHTQGAPLILPTRGHQRGAPSYRGAAAPVSTDGDGSPPAAS
DAVSVTSDEGSTGHAENCLPRIIKPRKRRKKDRKPTGGSASPGAGESGGLLEGEGDDAGG
TIVTLKPYMPMCYNYEAARTAAAAGGEAVESRRGCEGSRACGCGHCLPSHVFPTPPPSPA
SSSALSTMSSASSSCSSSEDEPLSGVSGSIESAGPGEGRSQLVRSFSEPQPQPQPTLHIS
STVTQSFAGHRDLDIRIVRSVARDVPVRTRHWSVPGAARLPSSCHRSQSETFFLSRHHNT
VTTPQPPQRPWIHLGEPDRTRPSCIFTVMCYNVLCDKYATRQMYGYCPSWALEWEYRKKG
IMDEIKHYLADIITLQEVETDQFFNFFLPELKNEGYDGIFSPKSRAKHMPENERKYVDGC
AIFWRTSKFTLVKERLIEFNQLAMANHDGNEDMLNRVMTKDNIGLAALLETKEAAWENSE
VPPDKLQVNQSVLVCTAHIHWDPEFCDVKLIQTIMLMSEIRQIVNQIVEESQHRSRMGKK
MDPGSIQLLLCGDLNSLPDSGVVEFLTKGSVSMDHEDFKGFGYKTCLQKIAMTKNNNSLV
NSSANIYTHCFRLTAAYDFSIMAYTNYTYDFKGIIDYIFHSTDTMSSLGVLGPIDPDWFR
ENKVMGCPHPHIPSDHFSLLVQLEMRPVSTAMNHPNGLLHR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgtggatagataccggggctcttgccttattgtgtccaaaccccgcggtggt
aggggcaaccccagggggcgtaggcccgctcaggataccagccagcaacagcaacatggg
ggaacgcatccgtcagccatggactcccctggtggcacgggctacctgatggagggtggt
tcagccttagcagggatgcctttgttttcgttcctcccccagcgtcgtgggccggctagg
gcccaccaagggcggccccagcagcagcgggcacagacttccgccacgcactaccaccac
aacatgaaggaccgcgagtcgcctcccgagggggagccccgcgaccgtccagacttgatt
gccgcaaccactgatgaagctgacgaagtggagcgtcttcctctagctcgtctagctctt
cacacccagggagctccgcttatcctgcctacccgcggacatcagcgtggcgcgccctct
taccggggagctgccgcccctgtctccacagacggggatgggtcgccgcccgccgccagc
gacgccgtctctgtaacctccgacgagggcagcaccggccacgccgagaactgtttaccg
cggatcatcaagccgcggaaacggcgtaaaaaggaccggaagcccacagggggttcggcg
tcgccgggtgcgggtgagagcggcgggctgttggagggggagggtgacgacgcaggtggc
accatcgtgaccctcaagccgtacatgcccatgtgttataactatgaggctgccaggacg
gcggccgcggccggtggggaggcggttgagagccgtcgcggctgtgaggggtcacgggcc
tgtggctgtggccactgtcttccctcccacgtcttccctacacccccgccatcaccagcc
tcctcctccgccctgtccaccatgtcctcggcttcatcgtcctgttcctcgtccgaggac
gagccactgtcaggggtgtcggggtcaatagagtcggcggggcctggggagggtcggagc
cagttggtgcggtcctttagtgagcctcaaccgcagccgcagccgacgctgcatatttcc
tcaacggtgacgcagtcctttgccggacaccgcgacttggacatccgtatcgtgaggagt
gtggcgcgagatgtgccggtccgcacccggcactggtcggtgccaggagccgctcgccta
ccctcgtcctgccaccggtcacagtctgaaacgttcttcctcagtcgtcaccacaataca
gtaacgacgccacagccaccccagagaccgtggatacaccttggcgagcctgacagaacc
agaccttcttgtatattcacagtgatgtgttataacgtgttatgtgacaagtatgcaaca
cgtcaaatgtacgggtattgcccatcatgggcattggagtgggaataccggaagaaaggc
atcatggatgagatcaaacactacttagcagacataatcactttacaggaggttgaaact
gaccagttcttcaattttttcctcccggagctgaagaatgaaggttatgatgggattttt
tcacccaaatccagagcgaagcacatgcctgaaaatgaaaggaaatatgttgatggttgt
gccatcttctggagaactagcaaatttaccctggtcaaagagcgattgattgagtttaac
cagttagcaatggctaatcatgatggaaatgaagatatgctgaaccgtgtcatgacaaag
gacaacattggcctagctgctttattggagaccaaagaagcagcttgggaaaattcagaa
gtgccaccagacaaattgcaagtgaatcaatctgtgcttgtttgtacagcccacatccac
tgggaccctgagttttgtgatgtgaaactcatccagacaataatgttgatgagtgagatt
cgacaaatagtcaaccagattgttgaagaatctcagcatagatcaaggatggggaagaag
atggaccctgggtcaatccagcttcttttatgtggtgacctcaactcgctcccagattca
ggtgttgttgagttcttaacaaaaggcagtgtttcaatggaccatgaagatttcaaaggt
tttgggtacaaaacctgcctgcagaagatagcaatgaccaagaacaataattctttggtt
aactctagtgctaacatctacacccactgcttcagacttactgctgcatatgatttctcc
atcatggcatatactaattacacgtatgacttcaaagggattatagattacatcttccat
agcactgataccatgtcatccctgggggttttaggtcctattgatcccgactggtttaga
gagaataaggtcatgggttgtccacaccctcatatcccatcagatcacttttctctacta
gttcagcttgagatgcgacctgtatctacagccatgaaccatccaaatggcctcctccac
aggtag
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