Panulirus ornatus (ornate spiny lobster): 139747597
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Entry
139747597 CDS
T10834
Symbol
Ndc1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139747597 (Ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139747597 (Ndc1)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139747597 (Ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
139747597
NCBI-ProteinID:
XP_071516167
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Position
69:15969053..15989067
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AA seq
552 aa
AA seq
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MKLDELFASEVLLWRYVRALACLLLLQVVAPMAVCNLYHTVIAKGILNPVTVISNLLSSC
ILPTRLLHLVVPATCFVLLARVHIKSYTVSAWVPINRWEKWRRLLSLTVMIRSGLIMLAC
ALLANFYTSLAHPDFPFLVIPCEPGDIMCYKRKSVIIFMGAYIGYRYAYRYFMANGNLVI
PAPAHPRKLQLIKACLSLRSMREACDTHGASRLSFLSAICVYMVISIAVSLCNDGLWQDW
LVIFDLTLMMMTLLATVLLAITLSLFSQVFHIFITEPIEVPVASVDDGNPEADGDSWRLC
NALSSSGLLQLLAFYDLKSLASSDPRNFARRSQVFAISQPGGHPRNWLGIINPSLNLIRR
FCERLRRHNCPADLPKVPLPSETMTASTDVNKNEVAKPPPVPLKERVTKFVLGLKRYPFF
GYFLSDLPDATNRSIFAEALPVIWAVQALGDLVAASFTEDKYGVVQKNIPDVLMAFTQLQ
KVVDSLSRVTIARRAGTGESVPTELQLRKALRSAVRSALYIITTTFGTTVLEMQVSSECQ
GKLRSYLEFKEG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgacgagctcttcgcgagtgaggttttactttggcgatatgttcgagcttta
gcatgcttgctgcttcttcaagtggtggcaccaatggctgtgtgtaacttatatcacaca
gttatagcaaaagggatcctaaatccagtgacagtaatctcaaatctcctatcttcttgt
atcctgccaaccagactcttgcatcttgtggttcctgcaacatgttttgttctactggca
cgtgtacacatcaagtcttatactgtaagtgcatgggtgcccattaatcgttgggagaaa
tggcgacgtttactttcattgacggtgatgatcagaagtgggctgattatgttagcttgt
gctttattagccaacttttatacatcacttgcacatcctgactttcccttccttgtgata
ccgtgtgaacctggggacatcatgtgttacaaacgcaagtctgtgatcatctttatgggt
gcttacataggttatcgctatgcttatagatacttcatggcaaatggtaatctggttata
ccagctcctgctcatccaaggaagctgcagttgatcaaagcctgcctgagtcttcggagc
atgagggaagcttgtgatactcatggagctagcagactgtcatttctttcagctatctgt
gtttatatggtgattagtatagctgtaagtctgtgtaacgatggactgtggcaagactgg
ctggtgatatttgatttaacattaatgatgatgaccctgctagccaccgtccttttagcc
attactctctccctcttctcacaagttttccatatttttataacagagccaattgaggta
ccagttgcctctgtggatgacggtaatcctgaagcagatggagattcatggaggctatgt
aatgccctcagttcaagtggcctccttcaacttttagcattttatgatctcaagtcacta
gcatcttcagatcctaggaactttgcaagacgttctcaagtttttgccatcagtcagcca
ggtggccatcctcggaactggttaggtatcataaacccatccctaaacctgattcgtaga
ttctgtgaacggcttcgacgacataactgccctgcagatctcccaaaagtccctctacca
tcagaaaccatgactgcttcaactgatgtcaacaaaaatgaggttgctaagccaccacct
gttccattgaaggaaagggtaaccaagtttgtacttggcttgaaacggtatccattcttt
ggatattttttatctgacctaccagatgccaccaatcgaagtatctttgctgaagcgtta
cctgtcatatgggctgttcaggctctcggggacctagttgcagcatccttcacagaagac
aagtatggtgtggtgcagaaaaatataccagatgttctgatggccttcacacaactacaa
aaggtggttgacagtttgagccgtgtaacaatagcaaggagagcaggcacaggagagagt
gtaccaactgagctgcagctgagaaaagcacttcgatcagctgttagatctgcattgtat
ataatcactaccacctttggaacaactgtcctagagatgcaggtatcatctgaatgccag
ggtaaactgcgatcttacttggagttcaaagaaggttga
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