Panulirus ornatus (ornate spiny lobster): 139748680
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Entry
139748680 CDS
T10834
Name
(RefSeq) cadherin-AgCad1-like isoform X1
KO
K06813
cadherin 23
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
porn03037
]
139748680
04515 Cell adhesion molecules [BR:
porn04515
]
139748680
Cilium and associated proteins [BR:
porn03037
]
Primary cilia and associated proteins
USH complex and associated proteins
139748680
Cell adhesion molecules [BR:
porn04515
]
Cadherins
Major cadherins
139748680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Motif
Other DBs
NCBI-GeneID:
139748680
NCBI-ProteinID:
XP_071518066
LinkDB
All DBs
Position
5:complement(39330175..39635397)
Genome browser
AA seq
1749 aa
AA seq
DB search
MMARGWVMLTVLVVMMVVVEGEAPESCPWLTIRNKTCLQKTECEDTGTRFYIFEDCEAGS
ELFIINDSKTPGDACKYLTVEEKTVRLLKDLDAETVYEPPPSCVNFVTPGPKATIITILD
VNEYNPTPEGHGQVVEFSEMENKGPRLIGNLTYSDQDRFETASLDFTPLSGDGSEEFKME
KELIGEEMVFLLSTKKSLDFESRMYYKLAYDIISTDDRGNIKKTEQSILVSVEDDGDNEP
YWISYYPSFSLEECYQDMYMFTVEARDRDIMINNAIQYSITSGNDDGYFKIDEIAGNVTT
NKTIDREHLAEDGIRDFSLGITATEYNENGSLIIPESNATQVTEIFIVDKNNKKPVFTSE
VFCTEMRELTGRNFPLDLNIYVYDMDEGNKGTFTLTSSMPDDLKVIPHVGMHNQSVTLEA
QWNDGNTSFDYECQNATLNITIFATEIANASHAGSTSILISLIDVNDHKPEFLLSEYNRS
LSEITDSNTSVLNVTATDGDISPDFGSESIRYFLKSCTQLEINNMTGEVLLISTLDYEMN
PSFSCVVEARDENGTASGNSVSGMIFITVDDAVDEPPEFIDLSPMNVTENSGPGTYVGTV
VVEDADSNASISFDIDWDNSVPFKNGIPVKVDALDTWFQLDNVDSSYPKHIRKIQVGAAK
PDYELADKVDLEIIVVDRATQLKSNSTTGTVKITILDENDTPPEFEGNYDSITVKENVES
GITIYQLKATDPDLNDIIKFSIDNDTLVKLSEPKVDDSIFTVDLQVQEGADIDRERMDSI
VINVTIEDEMNHTDSLQITISVTDINDNSPIMDPEKCNRTVEVAENSGDGKHVAYIEAND
KDEEDVHREVSYSLLNEHLEGEKNRRLPFKVNITTGEVVVFLDNGKREVNREQDDIWELI
FKAYDHCDDGDIQDCKILESEECYITINVTDENDEAPQEFEWIPNDDPLIVNEFMKKDEE
AKAPSSEIYKITAHDGDLANTNNTRLTFKVLAVRLVGTEENKGLFEAVNKNESWSGDSPV
LYYSTLRATKDLSGERGLYDIDIMALDHGNPQKHGNYTIRINVEDANDHEPQFRFNGCPY
TDLPTVEMEENFYEAGDEVRCTDNGQPFEIYVDDVDSGVNSEVNVTIDYEKSSSNVDGEG
QMRAFVIKQKSDRYALYVTEKIDKEKGGMYNLSLYAVDFGNPPKNSSSVVQVIVSNDFEF
PPYFCLVGLCDETLYMVENEPDVSASFKEATDMDNVGVDPEDIINYNKVYYHIAGGDTND
FKLDDDNTKRIIHLRNKPDGLDREKKSEYLIAINVFNGNDDSGLIDIDEMPVRNNTLYVT
ILVQDKNDNPPAFPRNVTFASFTTSDMKGKTLLVIEAKDPDLNESLSYWLENDFQWFDTI
IKPENPFRIESGNNNSANLLLNFIPTGEYGYCTFTINVHDAVDNNHTTQAKVYEISMDFQ
LYVYFRNDYQIVQQKEKQVSNTFTMVYGYPCIIDTIAQSQNDLGENIDGETTVVMHFIND
RENAPVSVDDILEATTSDQVISELLKRLNDIGLNLKSVGPLSTGNDINYSAQQILVLEVL
LGVVSLVLGSLVFMLLTAYCIRTKSLQRRVHVLSTNTFGSQSSDLNRLGMDMMKFPGSNK
FTSEGANPMYNMSEADLRNEESSSIGSGDSVLVGVEDNPEFKNYTAGRSDLFTGFDNQVL
SHSIDEVSVQASLNGGSKTNPLMDLGNGAKDHDLADGLAGFEVTIRRSSSGSEGASENGY
QNPNFSFTK
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgatggctcgcggttgggttatgctaacggtgttggtggttatgatggttgtggtagag
ggtgaggcaccggaaagttgcccctggctaaccatcaggaacaagacatgtctccagaag
actgagtgtgaagacaccggaacccgcttctacatttttgaagactgtgaggcaggcagt
gaattgtttattataaatgattcaaaaacaccgggagacgcatgcaaatacctcaccgtc
gaagaaaagacagtgcgcctacttaaggatctcgacgctgagacagtttacgagcctcct
cctagctgtgtgaactttgtgaccccgggtccaaaggccactatcatcactatcctggac
gtgaatgaatacaaccccactcccgaaggtcatggccaggtcgttgagttctctgagatg
gagaacaaaggaccaagattgatcggcaacctaacctactctgaccaagacaggtttgag
actgcatcattagacttcactccactcagtggagacggtagtgaggaattcaagatggaa
aaggagttaattggtgaggaaatggtgttccttctgagcaccaaaaaatccctggatttt
gagagccgtatgtactacaaactcgcctatgatatcattagcaccgatgatcgaggaaat
ataaaaaaaacagagcagagtatcctggtgtcagtggaagatgatggagataatgagcca
tattggatttcatactacccatcattcagcttagaagaatgttatcaagatatgtacatg
ttcactgtggaagctcgtgacagagatatcatgattaacaatgccatccagtacagcata
accagtggtaatgatgatggctactttaaaattgatgaaatagctggaaatgttacaaca
aataaaacaattgatcgagaacatttggcagaagacggcataagggatttctctttgggt
attactgctacagaatataatgaaaatggatcccttattattcctgaaagcaacgctact
caggtcacagaaatcttcatagttgataaaaacaataagaaaccagtctttacaagtgaa
gtgttctgtactgaaatgcgagaactgacaggcaggaactttcctttggatctgaatata
tatgtatatgatatggatgaggggaacaaaggaaccttcactctaacctccagcatgcct
gacgatcttaaagtaatcccacatgtaggcatgcataatcagagtgttactctagaggct
cagtggaatgatggaaatacctcctttgactatgaatgtcagaatgctacactaaatatt
acgatctttgcaactgaaatagctaatgcaagtcatgctggaagtacttcaattttgatt
agtcttattgatgtgaatgatcataaacctgagtttctattaagtgaatataatagatca
ctttcagagataacagattcaaatacttcagtattgaatgtgactgctactgatggtgac
atctctcctgactttgggtcagagagtatcaggtatttcttaaagtcatgtacacagctt
gagattaacaacatgactggagaagtgttattgatatcaaccttggattatgaaatgaac
ccttcattctcctgtgttgtggaggctcgagatgaaaatggtacagcatcaggaaattca
gtgagcggtatgatttttataacagtggatgatgcagttgatgaacctccagagtttata
gatctgtctcctatgaatgtgactgaaaacagtggtcctgggacatatgttgggactgtt
gtggtagaggatgcagattccaacgcaagtatctcctttgatattgactgggataattca
gtgccatttaagaatgggattcctgtgaaagtggatgcacttgatacgtggtttcaactg
gacaatgtagattcatcctatccgaagcatattagaaaaatccaagttggtgctgcaaaa
cctgactatgaattggcagataaagttgacttggaaattattgttgtcgatagagcaaca
caacttaaaagcaattccactacaggcacggtgaagatcaccattttggatgaaaatgat
acacctccagaatttgagggcaactatgatagcattacagtcaaagagaatgtggaaagt
ggcattaccatttatcagcttaaagcaactgaccctgacttaaatgacatcatcaagttc
tctattgacaatgacactcttgttaaactgagtgaacccaaggtagatgatagcatattt
acagtggatctgcaagtgcaggaaggggcagatattgacagagaacgtatggatagcatt
gttattaatgtcaccattgaagatgagatgaatcacacggatagtcttcagattaccatt
tctgtgactgacatcaatgacaattctcctataatggacccagaaaaatgtaacagaaca
gtagaagttgctgagaattcaggtgatggaaaacatgtggcatatattgaggccaatgat
aaggatgaagaagatgtacacagagaagtatcttattccctgcttaatgaacatttggaa
ggtgaaaaaaatcgtcgcttaccgtttaaagtcaatatcacaacaggagaggtggtggtt
ttccttgacaatgggaaaagggaagtaaaccgtgagcaagatgacatatgggagctaata
ttcaaagcatatgatcattgtgacgatggtgacatacaagattgtaaaatactggagagt
gaggaatgttacattaccataaacgttactgatgagaatgatgaagctcctcaagaattt
gaatggatcccaaatgatgacccactaatagtgaatgaattcatgaaaaaggatgaagag
gcaaaagcaccatcatctgagatttacaagatcactgcacatgatggagatttagcaaat
acaaacaataccaggcttaccttcaaagtattagctgttcgactagtgggcacagaagaa
aataaagggttgtttgaagctgtcaacaaaaacgaatcatggtctggggatagtccagtc
ctatactatagcacattgcgtgcaacaaaagatttaagtggagaaagagggctttatgat
attgacattatggctctggaccatggtaacccacaaaaacatggaaattataccattcgg
ataaatgtggaagatgccaacgaccatgaaccgcagtttagatttaatggttgcccttac
actgatctaccaactgttgaaatggaggagaacttttacgaagctggtgatgaagtcagg
tgtactgataatggtcagccttttgagatttatgtggatgatgttgattcaggtgtcaat
agtgaagtgaatgtcaccattgactatgaaaagtcatctagcaacgtggatggtgaaggt
cagatgcgagcatttgtaataaaacaaaaaagtgacaggtatgctttatatgtcactgag
aagattgacaaggagaaaggaggaatgtacaatctgtccttgtatgctgttgactttgga
aatcctcccaagaatagtagttcagtggtgcaggtgatagtgtccaatgattttgaattt
ccgccatacttctgcctcgtgggattatgtgatgaaactctgtacatggttgagaatgaa
ccagatgtttctgcaagttttaaagaagcaactgacatggacaatgtgggtgtggaccct
gaagacatcattaattataataaagtgtactaccatattgcagggggggacaccaatgac
ttcaaattggatgatgacaatactaagaggataattcatctaaggaacaaacctgatggc
ttagaccgtgaaaaaaaatcagagtatctcatagccataaatgtatttaatggcaatgat
gactctgggctcatagacatagatgaaatgcctgtaagaaacaatactctctatgtgaca
atattagtacaagataagaatgacaatccaccagcatttcctcgtaatgtcacatttgcc
agctttacaacaagtgacatgaagggcaaaactcttcttgtcattgaggctaaggatcct
gatctgaatgaatctctctcatactggctggaaaatgacttccagtggtttgacaccata
ataaaaccagaaaatcctttccggattgaatcgggaaacaataactctgccaatcttctt
ctgaactttattccaactggagaatatggctactgcacatttaccatcaacgtccatgat
gcagttgataacaaccatacaacccaggctaaagtatatgaaatttcgatggacttccaa
ctgtatgtttactttagaaatgactaccaaattgtacagcaaaaggaaaagcaagtttct
aatacttttaccatggtgtatgggtatccatgtatcatagatacaatagcacagagccag
aatgatttaggggagaacattgatggtgagactactgttgttatgcacttcatcaatgac
agggagaatgctcctgtctccgttgatgatattcttgaggccactacaagtgatcaagtt
attagtgaactgctgaagagactgaatgacattggtctcaatctgaagtctgttggaccc
ctttctacaggaaatgacataaactattcagcccaacaaatacttgtattggaagtacta
ctgggtgtggtgtccctggtgttgggctcactggtgttcatgcttcttacagcctactgt
atcaggacaaagagtttgcagcgtcgtgtgcatgttttgtcaactaacacgtttggctcc
cagtcctcagatcttaataggttgggcatggatatgatgaaatttcctggaagcaataaa
tttacaagtgagggggcaaatcccatgtacaatatgtcagaagcagacttacgaaacgag
gagtcaagcagcattggcagtggtgattctgtattggttggtgtggaagacaaccctgag
ttcaagaattatacagctggacgaagtgatcttttcacgggttttgacaaccaagtactc
agtcactctattgatgaagtttctgtccaagcatctctgaatggaggttccaaaactaac
cctctcatggatctgggaaatggagctaaagatcatgacctggctgatggactagcagga
tttgaggtaaccatcaggcgtagctccagtggttctgaaggtgcatcagaaaatggttat
caaaacccaaatttctcctttactaaataa
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integrated database retrieval system
