Panulirus ornatus (ornate spiny lobster): 139748774
Help
Entry
139748774 CDS
T10834
Name
(RefSeq) high mobility group protein DSP1-like
KO
K10802
high mobility group protein B1
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03410
Base excision repair
porn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139748774
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139748774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
porn03036
]
139748774
03400 DNA repair and recombination proteins [BR:
porn03400
]
139748774
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
porn04147
]
139748774
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
139748774
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
139748774
MMR (mismatch excision repair)
Other MMR factors
139748774
Exosome [BR:
porn04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139748774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
YABBY
DUF3974
Motif
Other DBs
NCBI-GeneID:
139748774
NCBI-ProteinID:
XP_071518309
LinkDB
All DBs
Position
5:complement(48389658..48390715)
Genome browser
AA seq
222 aa
AA seq
DB search
MPRGRPRGSGAALDKPRGRMTAYAFFVQTCRTEHKRQHPDENVQFAEFSRQCSERWKTMS
EKEKKKFHDMADQDKARYDSEMRFYVPSPGGRRGRRGRANKAKDPNKPKRALSAFFYYAN
EERAKVRAANPDFSVGEVAKELGRQWNELTEGEKIKFEKQAEEDRARYDREMTVYKSGGG
SPFKKMKTANGHSAHDDDDDDDENGMGPDEEDDEEEVSAEDE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtgggagacccagaggttcaggggcggccctagacaagccccgcggccgcatg
accgcgtacgccttcttcgtgcagacctgtcgcacggaacacaagaggcagcacccggac
gagaacgtgcagtttgccgagttctcccgccagtgttcagagcgctggaagactatgtcc
gagaaggagaagaagaagttccacgacatggcagaccaggacaaggcccgctacgactcc
gagatgagattctacgtgccttcccccggcgggcggcgtggacgacgaggccgcgccaac
aaggcaaaagaccccaacaagcccaagcgagctctctccgccttcttctactacgctaac
gaggagcgggccaaggtgcgggccgccaacccggacttctctgtaggcgaggtggccaag
gagctggggcgtcagtggaacgaactgacggagggagagaaaattaagttcgagaagcag
gcggaggaggaccgcgcccgctacgaccgcgagatgaccgtctacaagtcgggcggcggc
tcacccttcaagaagatgaagacggccaatggccactctgcccacgacgacgatgacgac
gacgacgagaacggcatgggacccgacgaggaagacgacgaggaggaagtgtcggcagag
gacgagtga
DBGET
integrated database retrieval system
