Panulirus ornatus (ornate spiny lobster): 139749581
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Entry
139749581 CDS
T10834
Symbol
lt
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04140
Autophagy - animal
porn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139749581 (lt)
04148 Efferocytosis
139749581 (lt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
porn04131
]
139749581 (lt)
Membrane trafficking [BR:
porn04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
139749581 (lt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WDR55
zf-RING_5
TPR_7
zf_RING_Vps8_fungal
zf_RING_Vps8
TPR_GEMI5
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR19_1st
EIF3I
TPR_17
Beta-prop_EML
zf-C3H2C3
zf-RING_11
N_NLPC_P60
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
139749581
NCBI-ProteinID:
XP_071519753
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Position
7:complement(44071005..44122346)
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AA seq
869 aa
AA seq
DB search
METSVASSSAAAEKNEPEKEVEKETEEEDSEDEDSEEEEEPKLKYERISGDLREILKRDG
ASCIAANSKLIIIGTNWGRIYVLDHLGNKVKEFASHTNPVTMLDMDGNGDYIASCSHDRK
VVIQGLYTTENPLIHVMDAPVRSVALDPAYYKSRSGRRFVVGTNKVILFEKVFFHPSRST
VLSEGSGPTRAMKWAGQFLAWATDSGVRVMNMNTKMVITLIKRDHSLALPSDQYPPHLCW
PDDRTLIVGWGDSVKVCRVRERASNPSHLPCGPVDLPSHYLEIIYMFTTDFYVCGVGPLD
EHVVVLAYNKQTDLSLASLGVDSRRPQMRVLEPLQKTFEEISKDVLGIRCYQEYKPANYH
LECLVGERQFYIVCPQDVVVAKPRSADDRIEWLLENKKHAEALEVVKTSREVQRYTLLSV
GRVYLDHLMACGSYQDAAKLCTQILGSDKALWEEAVVRFTRVRQLRVLSPHLPLGHGVNL
DPAVYQNVLLDLLQTDHQGFLQVVQDWPGHLYNVSYIINNVLETLARNTNNMTLLQALAH
LYSNIDKHDKALAIYLKLKHKDVFSLIARHNLYGCVAKHVVELMVLDSTPTLEICCQHIN
IVPPENVVSALSTHPQFLYKYLDALYEHRRELSKTYHSQLVALYADYDRKKLLPLLLTSG
SYDLCDALEVCRSRCLTTETIHLLDRMGNSMESLQLILEEEQDLQWAIRLCKEHDDVDLW
SRLINFALDKPECIRELLNNIGTHIDPLLIINRIPKGMEIPGLRDALVKILHDYHLQIEL
RTGCQRILASDSSNLLSKLVSTQNAGYPVYDDTECAACNKRVLSSSRGEFSTLVVFACRH
VYHQFCLPDYAQQVCQVCRNDKKRSFLML
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctctgttgcatcatcatcagcggcagcagaaaagaatgaaccagagaaggag
gtagaaaaggaaacagaggaggaagattctgaagatgaagactcggaggaagaggaggaa
ccaaagctgaaatatgagaggatctcaggagacttgagggagatactgaagagagatggg
gcctcctgtattgctgccaactccaagctgatcatcattggaaccaactggggacgcatt
tacgtgcttgaccacctaggcaacaaagtgaaggaatttgcttcacatactaaccctgtc
acaatgttagatatggatggaaatggagactacattgcttcttgttcacatgatcgtaag
gttgtcatccagggtctgtacacaacagagaacccacttatccatgtgatggatgctcct
gtgcgaagtgtggcccttgaccctgcttactacaagtctcgctctggccgtcgatttgtt
gtgggtacaaataaggtgatcctctttgagaaggtgttctttcacccatcgcggtccaca
gtcctcagtgaaggcagtggtcctacaagagccatgaagtgggctggtcagtttcttgct
tgggctactgactctggtgtacgagtaatgaacatgaatactaagatggtcattacgctt
ataaagagggatcacagtttagccttgccatctgatcagtatcctccacacctgtgttgg
ccagatgaccgcactcttatagtgggctggggagattcagtgaaagtgtgtcgggtcagg
gagcgagcatccaacccttcccacttaccgtgcggccctgtggatctgccatcacattac
cttgagattatttacatgttcacaactgacttctatgtgtgtggtgtggggccactggat
gagcatgtagtggtcttggcttacaataaacaaacagatctttcgctggccagcttaggg
gtagactctcgtagaccacagatgcgtgttcttgagcccctgcagaaaacctttgaagag
atttcgaaggatgtgcttggtataagatgctatcaagaatataaaccagcaaactaccac
ctagagtgcttagttggggagcgtcagttctacattgtgtgcccccaagatgtagtcgtt
gccaaaccaaggagtgctgatgatcgcatcgaatggttgctggagaacaagaaacatgca
gaagctcttgaggtggtaaagacatcaagggaagttcagcgctatactctgctcagtgtt
ggtagggtatatttagaccatctgatggcctgtggcagttaccaggatgcagccaagctt
tgcacacaaatacttggttctgacaaggcactctgggaggaagcagtggtgagattcacc
cgtgttcgtcaattgcgtgtgttaagtccacacctaccccttggtcatggtgtcaatctg
gatcctgcagtgtatcagaatgtcttgctggacttgctgcagactgaccatcaaggattt
ctccaagtggttcaggactggcctggtcatctctacaatgtttcatacatcatcaataac
gtccttgagacccttgctcggaacactaataatatgacattacttcaagctcttgctcac
ctctattcaaacattgataaacatgataaagctcttgccatctatctgaaattgaaacat
aaagatgttttctctctcatcgctcgtcacaatttgtatggctgtgtagcaaaacatgtc
gtggagctgatggttctagattctactccaacactggagatctgttgccagcatatcaat
attgtcccaccagaaaatgttgtgtctgctctttctacacatccacagtttctttacaag
tacctggatgccctttatgaacatcgccgtgagttaagcaagacataccatagtcagctg
gtggccctgtacgctgactatgataggaaaaagcttctgccactcttgcttacatccggc
tcatatgatctttgtgatgctctagaagtctgccggtcacgctgcctcaccacagagacc
atccatcttttagatcgaatgggtaacagcatggagtctttgcagctgattttggaagaa
gagcaggacctccagtgggccattcgactctgcaaagaacatgatgatgttgacctatgg
agtcgccttatcaattttgctttagataaacccgaatgtattcgtgagttgcttaacaat
attgggacccacattgatcctttgctgataattaaccgcattcccaagggtatggagatc
cctggacttcgggatgcactagtcaaaattcttcatgattaccatctgcagatcgaactc
agaacaggttgccagaggattttggcttcagatagcagcaatctacttagcaagcttgta
tctacgcagaatgctggttatcccgtatatgatgacactgagtgtgcagcctgcaacaag
agagttttaagctcaagccgaggagagttctctaccttagtggtattcgcttgtcgccac
gtttaccaccagttctgcttaccggattatgcccaacaggtatgtcaagtctgcagaaat
gacaagaagagaagtttcctcatgttgtga
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