KEGG T10834: 139749623

Panulirus ornatus (ornate spiny lobster): 139749623

Entry

139749623         CDS       T10834

Name

(RefSeq) roquin-1-like

K15690

RING finger and CCCH-type zinc finger domain-containing protein

Organism

porn Panulirus ornatus (ornate spiny lobster)

Brite

KEGG Orthology (KO) [BR:porn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:porn03000]
    139749623
   04121 Ubiquitin system [BR:porn04121]
    139749623
Transcription factors [BR:porn03000]
Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    139749623
Ubiquitin system [BR:porn04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    139749623

SSDB

Motif

Pfam:

Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4 zf-C3HC4_4 Prok-RING_4 zf-CCCH_UNK zf-C3HC4_2 zf_CCCH_4 Vesi_VP2

Other DBs

NCBI-GeneID:

139749623

NCBI-ProteinID:

XP_071519862

LinkDB

Position

1:complement(73453610..73569334)

AA seq 979 aa
MPIQAPQWTEFLSCPICCHEFDSGQRGPISLGCGHTVCRACLAKLQRNQCPYDQTVMRLE
LDQLPVNGALLSLVGAGTCVEEGDLPLPPPVPPAHTRNYFMAVKCIKDLALFLKPFSGSG
TNGSTSLLSRPMQRKLVTLINCQLVEDEGRARAVRAARSLGERTVTELILQHQNHQQLSA
NLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKTS
IGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPD
QWSSLLYGDTAHKSHMQSIIDKLQTPQSFGQSVQELVIALQRTGDPGQLSSLRPHLELLA
ALDPSPDAPSPGWKPCAAAMEAVRAVVKGLVHFIQNHGNRKMPDAHHPHNAKYKTSMCRD
LTQRGGCPRGNNCTFAHSEEELEKYRNRSRKHGKGIPQTPATPTIKSQTQHHQSQQHPSQ
PQQQPQHPQGSVEAVINAKNGEHAPVAVIQKTGTVEELLQAGEMPTTPTPFDPHKFVHIP
SHTQSVPVLPAPTPAPAIIQPAIAPTPFHATPVAEYTYNSFPCQPPVFAQAAPPQQPLPS
AAAAVAVTAAAAAVFPGQAAAIVPDLYGGNPPTMLLNTAPVYNVTGHAGEFCIPIANTKP
TNSGLHPLVSCWPDTNCTALCMTTTATTTSLTTVTNVASKSMEELKERKEAILNQLETIV
GKEATHQVATQIANGEEPSKPQEFTSTYSIWTSGADFYIASKSVDKGYDPSTGYRTFTTR
KEDSKGKDDFIPFDPPLVSRFGPISRMSRTVIQPANPIQSSANNPTETTTTPTVRRPVPA
ISPMPQVLYQPGGYTLGVMTCIPTPLEHMNTVGHGIVDPLLTQLESSGIRTISADPAQQE
CLRQQFAAAREGIDAIVLDEKRMAEWQEVRLKEELSLVMNRIEAKRKEMEARNSVRDTSE
KDLGDFEKNWKFDFDDEKE

NT seq 2940 nt +upstreamnt +downstreamnt
atgccgatccaggctcctcagtggaccgagttcttatcgtgtcctatttgctgccatgaa
tttgacagtggtcagcgtgggcctatcagcctgggctgtggacacactgtctgccgtgct
tgcctggccaagctgcagcgtaaccagtgtccttatgaccagactgtgatgagactggag
ttggaccaacttcctgtcaatggtgcattgctgtcactggtgggggctgggacatgtgtg
gaagagggggatcttccacttcctccacccgtgcccccagctcacactcgcaattacttt
atggctgtcaagtgcatcaaagatctggcgctcttcctaaaaccattttcaggaagtgga
acaaatggctcaacttcactcctgtcacggcccatgcaaaggaagctggttactctcatc
aactgccagttggtagaagatgagggacgagccagagcagttcgtgcagctcgatctcta
ggtgagcggactgtcactgagcttatcctacaacatcagaaccaccagcagctctcagct
aatctatgggcagcagtgcgtgcaagaggatgtcaatttcttggcccagcaatgcaggaa
gaagtactgaagttagttcttttagccctagaggatggttcagctctttcccgaaaagtg
ttggtcatgtttgtggttcagcgcttagagccacatttcccacaggcctccaagaccagt
attggacatgttgtgcaactgctgtaccgtgcctcgtgtttcaaggtatcaaaaagagaa
ggagattcatcactcatgcagttgaaggaagaattcagaacatatgaggccttgcgacga
gaacatgatgcccagatagtccagattgcaacagaagcaggccttagaatagcaccagat
cagtggtcatctctcttgtatggtgacactgcccacaaatcccacatgcagtctattatt
gataagcttcagacacctcagtcttttggccagtctgtgcaggagttggtgatagctctt
caaagaacaggtgacccaggacagctgtcatctttgagacctcacttagaattgttggca
gctttagacccttctcctgatgccccttctccaggctggaaaccatgtgctgctgcaatg
gaagctgttagagctgttgttaaaggactagtacatttcatacagaaccatggcaatcgc
aaaatgccagatgcccatcacccccataatgcaaagtacaagacaagcatgtgccgagat
ttgactcaaagaggaggatgtccccgtggaaataattgtacctttgcacattcagaagag
gaacttgaaaagtatagaaatagaagtcgaaagcatggtaaaggcattcctcaaacacct
gccactcctacaattaaatcacagactcagcaccatcagtctcagcaacatccttctcaa
ccacagcaacagccacaacatccacaaggaagtgtagaagcagtcataaatgctaaaaat
ggtgaacatgctcctgttgcagtcattcagaaaactggcacagttgaagagttacttcag
gctggggaaatgcccacaactcccactccatttgacccacataagtttgtgcatatccca
tcacatacacagtcagtgccagtgttaccagctccaactcctgccccagcaattatacaa
ccagctatagccccaacaccctttcatgcaacaccagttgctgaatacacttacaattcc
tttccttgccagcctccagtgtttgctcaggcagcacctcctcagcaacctttaccttct
gctgctgccgctgtagctgttactgcagcagcagcagctgtttttccaggtcaggctgca
gcaatagtgccagatttatatggtgggaaccccccaacaatgcttttgaatacagcacct
gtttataatgttactggccatgctggtgaattttgtattccaattgctaatactaaacca
accaactcaggtcttcaccctttagtttcatgttggccagacaccaattgcactgcattg
tgtatgactactactgcaacaacaacatccttgacaacagtaacaaatgttgcatcaaaa
tcaatggaggagttgaaggaaaggaaggaagctatcttaaatcagctggagacaattgtt
ggaaaggaagcaacacaccaagttgctacccaaattgcaaatggtgaagaaccaagcaaa
ccacaagagtttacatctacatatagtatttggacttctggtgctgatttttatattgct
tccaaatcagtggataaaggttatgatccaagcacaggctaccgtacctttaccacaaga
aaggaagactctaaaggaaaggatgactttattccatttgatccgccactggtgagtcgt
tttggaccaatctctagaatgtcaagaacagtcatccagcctgctaatcccatccagtca
tcagcaaataaccctacagagaccactactacacctactgtcagaaggccagttcctgca
atttcgcccatgcctcaggttctttatcaaccaggaggctacactttgggggtcatgacc
tgtatacctacacctctggaacatatgaacactgtaggccatggtatagttgacccactg
ctaacccagcttgaatcatctggtataagaacaatttctgcagatccagcacagcaagag
tgtctgaggcagcagtttgcagccgcacgagagggaattgatgccattgttttggatgaa
aagagaatggctgagtggcaggaggtacgtcttaaggaagagctgagtcttgtaatgaac
aggattgaagcaaagcgaaaggagatggaagcaagaaattccgtacgggatacgagtgag
aaggatttaggagattttgagaagaattggaagtttgatttcgatgatgaaaaggagtga

DBGET integrated database retrieval system