Panulirus ornatus (ornate spiny lobster): 139749823
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Entry
139749823 CDS
T10834
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139749823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
porn03009
]
139749823
Ribosome biogenesis [BR:
porn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
139749823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
WD40_RFWD3
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_SPT8
WDR54
Beta-prop_Vps41
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
139749823
NCBI-ProteinID:
XP_071520220
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Position
8:9638422..9685350
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AA seq
542 aa
AA seq
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MAAYKKTFTRAFSNSSVKSTSDGIYWRKLGFPITVKEFTAINSVDVSPVEPHYIAVTSGP
KVDVYHKHTTQVWRTLSRFQRLAYGGKFRQDGQLLLAGSQEGEVKLFNYRQKQLLRIFRG
HEGPTHCADFIQGLPQVVSFSDDKTAIVWDISDESKICTLSEHKDFIRAGIGSPASANMI
LTGSYDHTVKLWDTRTATSVLTVDHGTPVESLVCFPSGGIFVSAGGCEVKVWDAVAGRLL
SKLSQHHKTVTCLSFACDKRRLLSGSLDCHVKIYDVDTYSVVHTLDYPAPVLCMALAPGD
STLVVGMVSAGSGLVSFQHRREPETTATVTSQRKAANKRNVILEDFKTVPNDVIVFKEAD
DKLARYEKMIRKFRFSHALDTVMGSYISNKCTHISVAILQELIRCGGIRTAVAGRDVKKL
MPLLLFLQKNIRHPTYKHVLMDVTNIVIDIYGDTLDENPALVRCFRQLKDEVAAEMLLSR
EHISLMGAIQMFLTASAPERAPNVTSVQQLAATSSVCNSDVSKALLPSSSTKFAETLVVD
IC
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtacaagaagacgttcactcgtgctttttctaattcttcagttaaatctaca
tcagatggaatatactggcgaaaattaggattcccaataacggtcaaagaatttactgct
atcaacagtgtagatgtgagtcctgtcgagccacattatattgctgtaacctcagggcct
aaggttgatgtgtaccacaagcatactactcaggtttggcgaactctttcaagatttcag
cgcttagcttatggcggaaagtttcgacaagatggtcagcttcttttggctggctcacag
gaaggcgaggttaagcttttcaattacagacaaaagcaacttctccgtatatttagagga
catgagggtcccactcactgtgctgacttcatccaaggtttgccacaagttgtttccttc
tcagatgacaaaactgcaattgtgtgggatatcagtgatgaaagtaaaatctgcaccttg
tcagaacacaaggattttatccgtgcaggaatagggagtccagcttcagcaaacatgatc
ctcactggttcatatgaccatacagttaagctatgggacactcgtacagcaaccagtgtc
ctaactgtcgaccatggtacaccagttgaaagccttgtctgcttcccgtctggtggaatc
tttgtctcagcaggtggttgtgaggtaaaagtttgggatgcagtagccggtcggttattg
tccaaattgtcacagcaccacaagactgtcacctgcctttcttttgcctgtgacaagagg
agactcttgtctggctcacttgactgccatgtgaagatatatgatgttgacacctactca
gttgttcacacacttgactaccctgcacctgttctatgcatggcacttgctcctggagat
tctacgcttgttgttggtatggtttctgcagggtctgggcttgtgtcatttcagcaccgt
cgagaaccagaaactactgcaacagtgacttcccaaagaaaagctgcaaataaaaggaat
gtaatccttgaggactttaaaacagttcccaatgatgtgattgtttttaaagaagcagat
gacaaacttgcaagatatgaaaaaatgatcaggaagtttagattcagccatgcattggat
acagtcatggggtcttatatttcaaacaaatgcacacatatatctgttgcaattttacag
gaattgatcagatgtggaggaattcgaactgctgttgctgggagggatgtgaagaagctt
atgcctttgctacttttcttgcaaaagaatattcgacatcctacatacaagcatgttctt
atggatgtgactaatattgttattgatatctatggtgatactttggatgaaaatccagct
ttggtgagatgttttagacaattaaaggatgaggttgctgctgaaatgcttcttagtcgt
gaacatatttcactgatgggtgctattcagatgttcctcactgcttcagctccagagaga
gcaccaaatgtgactagtgtgcagcaactagcagcaacttcttcagtgtgtaacagtgat
gtcagcaaagcactactcccatcatcttcaaccaaatttgctgaaactcttgttgtagat
atttgctga
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