Panulirus ornatus (ornate spiny lobster): 139750165
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Entry
139750165 CDS
T10834
Name
(RefSeq) uncharacterized protein
KO
K19719
collagen type II alpha
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139750165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
porn00536
]
139750165
Glycosaminoglycan binding proteins [BR:
porn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139750165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
139750165
NCBI-ProteinID:
XP_071520619
LinkDB
All DBs
Position
1:80377815..80388304
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AA seq
1349 aa
AA seq
DB search
MIKFVILMLSSSSIDRVDAKVVWHVMSFPFISLEQITPWLTQLSQSQGGEKGPQPDPFMH
LQAQVGPVGPRGSPGAPGPSGPQGFQGMRGEPGDPGPSGSSGPPGPRGMPGIPGKDGENG
DDGAAGPPGAVGPPGPRGLPGMPGLPGVKGHRGFPGLDGSKGEQGTLGDKGASGPSGPPG
PIGPMGSAGPRGERGREGPPGPPGLRGIDGIAGPPGPPGPPGKSGPPGFPGSAGAKGDQG
VQGPKGSQGLQGPRGEAGKPGSPGETGSQGAPGKDGLSGEKGAPGSQGDSGPPGFPGARG
PPGLPGSPGMPGIKGERGLAGVRGFKGEFGMKGEGGTPGPRGLPGAPGSPGKRGKRGMRG
PPGGTGPQGERGPTGGRGLPGADGPPGPKGQSGDPGPPGSAGQKGREGNPGPPGLPGRQG
LRGPTGLSGPSGKTGRPGDRGQPGADGKIGDQGPQGIQGLPGPMGPPGPIGPLGEPGKDG
NPGETGPTGPRGDPGKDGSQGPQGSPGPQGSSGERGPPGPPGARGFQGLPGAPGISGSNG
KDGEAGLQGPRGLPGASGLRGQRGFPGERGAQGPPGETGKRGESGLPGPDGPPGPSGPPG
QKGHSGPSGLVGLPGGRGPPGLPGEKGERGSLGLVGPEGPPGRQGDQGPQGIMGPLGPPG
EPAEKGDPGPPGPPGEPGANGMLGERGPQGEQGLQGFPGPIGAPGMSGPKGQRGLPGQKG
SQGNTGPAGLPGESGAPGLVGLTGAKGQRGEIGQRGEPGLMGPPGRSGSPGTPGTQGDQG
PPGRGGSPGIKGTAGDTGRPGLPGPAGQSGAPGPEGPKGESGPEGRPGPLGQPGPVGSAG
ERGLPGLPGPPGPPGLRGKTGTTGEPGMEGKRGDEGPVGPPGLPGPIGPIGPTGDTGSPG
SDGKPGPPGISGRTGDKGPQGPPGSQGSPGPTGLPGPPGPSGPIGPTGERGDRGEVGPQG
VEGPSGPRGKPGAPGSQGEKGDTGAQGPKGAKGHRGLIGLQGLPGAQGPPGDKGVPGVAG
PTGPAGEPGPKGPPGRDGGIGPQGIMGPPGPRGPSGEEGPRGSPGSPGPAGPPGPPGETM
GYDHNALLAILGQGQTKGPDPLQSDDSDLPARLFGKEVSDDERRELIAKAYEQLKTSFKK
FLKPEGTKDSPAKTCRDLAHTHPELPSGEYWMDPNEGDSKDAIVVHCDMEKKATCVLPQP
ATTEEFNWRGQTRGLTWLGDDIQPGFEFRYKADGNQLQFLQLLSSEASQELTYHCKNSIA
VYDASRRSLRSAMQIMTSSDTELKARGNKKLRYRIIHDGCKRKQSTWASTKVSYRTDRPQ
RLPFTDVGLRDVGGEDQAFKIEVGPVCFS
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtttgttatcctcatgttatcgtcatcttcaatcgaccgtgtcgatgctaaa
gtggtgtggcatgttatgagttttccttttatctccctggaacagatcacgccctggttg
acccagttatctcagtcccagggaggcgagaaaggaccccagcccgacccattcatgcac
cttcaggcacaagttggtcccgttggccccagaggttctccaggtgccccaggtccctcc
ggcccacagggtttccagggtatgcgaggcgagccaggagacccaggcccaagcggttcc
tcaggacctcctggaccacgaggaatgcccggtatccctgggaaggatggtgagaatggt
gacgacggtgctgctggtcctcccggagcagttggtcctcccggcccccgtggcctgccc
ggcatgcccggtctgccaggagtaaagggtcaccgtggcttccccggtctggacggctcc
aagggagaacagggaacactaggagacaagggagcctccggtccctccggtcctcctggt
cccatcggccccatggggtctgctggtcctcgaggtgagcgaggtagagaaggccctccc
ggtcctcctggtctgagaggtatcgacggcatcgctggtcctcccggtccccccggtcct
cctggaaagtctggtccacctggattccccggtagtgctggagctaagggagaccaaggt
gtacaagggcctaagggttcgcaaggtcttcagggcccccgtggtgaggctggtaagcct
gggtcaccaggtgaaacaggctcccagggagcccccggtaaagacggtctgtctggagag
aagggcgcccctggttcccagggagactccggtcccccagggttcccaggtgcccgaggt
ccccccggactacctggcagcccaggaatgcctggcatcaagggtgagaggggtctggct
ggcgtgcgaggcttcaagggagagttcggtatgaagggagagggtggtacccccggcccc
cgtgggttgcctggtgcccccggctcccctggcaagcgtggtaagagagggatgcgaggt
cctcccggaggaactggaccccagggtgaacgtggacccacaggaggccgtggtctccca
ggtgccgacggacccccaggccccaaaggtcagagtggtgaccctggtccgccaggatct
gctggccagaagggccgtgagggcaaccccggtccacctggcttacccggtcgacaggga
ctgcgaggacccaccggtctctctggcccctccggcaaaacaggtagacccggagatcga
ggtcaacctggtgctgatggcaaaattggtgaccaaggacctcagggtatccagggtctt
cctggacccatgggacctcctggaccaattggaccactcggtgaacccggcaaggacggc
aaccctggtgaaaccggccccacaggcccccggggagacccaggaaaggatggtagccag
ggtccccagggttctcctggtccacaaggatcatccggtgagcgaggtcctccgggacct
cctggtgctcgaggtttccagggtctacccggagctcctggtatctctggatcgaacggc
aaggacggagaggctggtcttcagggtccccgaggtctccccggtgcttcaggcttgcgc
ggtcagcgaggcttcccaggagagcgtggagcgcaaggtcccccgggagagacaggcaaa
cgtggagagtctggtctgcccggtcccgacggcccacccggtccctctggacctccagga
caaaagggtcactctggcccctctggtctcgtcggtctgcctggaggacgtggtccaccc
ggcctgccaggagagaagggtgaacgaggttcccttggtcttgtcggacccgagggccca
ccaggtcgccagggtgaccagggccctcaaggtataatgggacccctaggacctccagga
gaacctgcagagaagggcgacccaggtccaccaggtcctcccggtgagcctggtgccaac
ggtatgctgggagagagaggccctcaaggcgaacaaggtcttcaaggattccccggtcca
attggagctccagggatgtcaggacctaaaggacaacgtggtcttcctggtcagaagggc
agtcagggtaacaccggccctgcaggacttcccggagaatctggagccccaggtttggta
ggactcactggtgcaaagggacagcgaggtgaaattggtcaacgaggagaacccggtctt
atgggtcccccaggacgatctggctccccaggaacacctggcacacaaggtgaccaagga
cctccgggtcgtggtggaagccctggaatcaagggaaccgctggtgacactggccggccc
ggtctacccggaccagccggtcagtccggcgctcctggaccagagggtcccaagggtgag
tctggtcccgagggtcgtcccggcccattgggtcagccaggtcctgttggttcagctgga
gagcgtgggttgcctggtctgcccggcccacctggacctcctggtctccgaggaaagact
ggcactactggagaacccggtatggaaggcaaacgtggtgacgaaggtcccgtcggtcct
cctggcttacctggtcccattggtcccatcggccccactggcgacactggatctcccggc
tcggacggtaaacccggtcctcctggtatttctggtcgtactggagacaagggcccacaa
ggtccccctggttctcagggcagccctggacccaccggtctacctggaccccctggtcct
tccggacccattggacccactggagagcgtggagatcgtggagaggttggtccacagggt
gtggagggcccctctggtcctcgcggcaaacccggagcgccagggtcacagggagagaaa
ggagacacaggagcacaaggtcccaaaggtgccaagggacaccgtggtctcattggtctt
caaggtcttcccggagctcagggtcctcctggtgacaaaggtgtacctggcgttgctggc
cccacaggcccggctggtgagcccggccccaagggtcctcctggtcgtgacggaggcatt
ggtcctcagggtatcatgggtccacctggtccgcgtggtcctagtggtgaagaaggtcct
cgtggttctcccggttcacccggtcctgccggacctcctggtccacctggtgagactatg
ggttacgatcacaatgctctgctggccattcttggacagggacagaccaagggcccagat
ccccttcagagcgacgactccgaccttccggcgcgtctcttcggcaaagaagtctccgac
gatgaacgtcgcgaacttattgcaaaggcctatgaacagctcaagacatcgttcaagaag
ttcctcaaaccagaaggcacgaaagattccccagccaagacttgtcgcgacctggcacac
acccacccagagctacccagtggcgagtactggatggatcccaacgagggcgatagcaaa
gacgccatcgtggtgcactgtgacatggagaagaaggcgacctgtgtgctgcctcagcct
gccactaccgaggagttcaactggcgcggccagactcgaggcttgacctggctcggggac
gacattcagccaggcttcgagttcaggtataaggccgacggcaaccaactgcagttccta
cagctgctgtcttcagaagcgtcgcaggagctgacataccactgcaagaactccatcgcc
gtgtacgacgccagcaggaggagcctgcgcagcgccatgcagatcatgacctcctcagac
acagagcttaaagccagaggaaataagaagttgagatacagaattatacacgatgggtgt
aagaggaagcagtccacgtgggcgtcaacgaaggtgtcctaccgcacagacaggcctcag
agattaccattcaccgacgtgggattgagggatgtcggcggagaggaccaggccttcaag
atcgaggtcggaccagtgtgtttctcgtag
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