Panulirus ornatus (ornate spiny lobster): 139750763
Help
Entry
139750763 CDS
T10834
Symbol
Prp16
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139750763 (Prp16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
porn03041
]
139750763 (Prp16)
Enzymes [BR:
porn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139750763 (Prp16)
Spliceosome [BR:
porn03041
]
Complex C
Other components
Step II factors
139750763 (Prp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_19
AAA_22
nSTAND3
T2SSE
AAA_30
Flavi_DEAD
AAA_7
SRP54
ABC_tran
Sigma54_activ_2
Sigma54_activat
AAA_16
cobW
Motif
Other DBs
NCBI-GeneID:
139750763
NCBI-ProteinID:
XP_071521580
LinkDB
All DBs
Position
10:complement(7548523..7559107)
Genome browser
AA seq
1257 aa
AA seq
DB search
MSHILEGSSGGVGGLIIRKNKKDDEDFVFKKPALPIRGSVLGLDKLAALKRKIREDTVFE
KSSSKNRKHSSSSSSDSDSDDDDYDDKKRHTKTSDKGKEREYRSRYDETPTHTGGVNREI
KDKIIEKQKKQKDKYVSASTKDKKKERERSSRDRDHNRDRKYKGSEREKRDKHWHRDRHR
NRYYSERNERNERRDYGDRSEMNERRGDYSERSDRSDRWNVSERSERSGIQGDWSERSSR
TPRFSDAPETPKIPGVKDTPSHSSWDDDDNTPSKTSSWDLPTPFSSHRRSQDIDWSIRSS
NQSVRERSPPSRKPYQHSDRTPLPTPSYKYNAWMTERGNKEEREFEDEEEREKWEEEEKR
LDRQWYDMDQGYDDTNNPFSDVSAEYERKKTEKIEKSKRKMSAKQRQIHKDNELWETNRM
LTSGVVQKIDYDEDFEEEFSNRVHILVHNIVPPFLDGRIVFTKQPEPVIPVKDSTSDMAI
VSRKGSAVVKAQREQRERRKAAKKEWELAGTQLGNLIGIKKEDVTDDRKIEEGETDYKAD
QKFAEHMKAASEASSDFARKKSIREQRQFLPVFAVREELLRIIRENSVVIIVGETGSGKT
TQLTQYLHEEGYSKLGMIGCTQPRRVAAMSVAKRVSDEMGTRLGEEVGYAIRFEDCTSEK
TIMKYMTDGILLRESLRESDLDNYSAVIMDEAHERSLSTDVLFGLLREVVARRQDLKLIV
TSATMDSQKFATFFGEVPVFTIPGRTFPVELFFSRNVVEDYVEAAVKQALQIHLQADEGD
ILVFMPGQEDIEVTCELIVEKLSEIDNAPQLAVLPIYSQLPSDLQAKIFQRAPDGLRKCV
VATNIAETSLTVDGIKYVVDSGYCKLKVFNPRVGMDGLQVYPVSQANANQRLGRAGRTGP
GMCYRLYTERQYKDELLPTTVPEIQRTNLANVVLLLKSLGVEDLLKFHFMDPPPQDNLLN
SQYQLWILGALDNTGVLTKLGRAMVEFPLDPALSKMLLAAVDMRCSEEILTIVSMLSVPA
LFYRPKGREEEADAMREKFQVPESDHLTYLNIYRQWRLQKYSMNWCNKHFLHFKALKKVR
EVRQQLHDIMDQQKLEVVSCGMDEDLVRKCICAAYFHQACRLKGIGEYVNLRTGTPCHLH
PTSALFGMGYTPDYIVYHELVMTSKEYMQCVTAVEGSWLAEVGDKFYSINEGGTSRLEKR
RQALAHKAAMEAEMDRAQDTLKARAEERQRKQDSSHRQQVYDIGTPRRLQTPARFGI
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacattttggaaggttcaagtgggggtgttggtggccttatcatccgcaaaaac
aagaaagatgatgaagattttgtcttcaagaagcctgccctgcctattagaggatcagtt
ttaggactggataaactagcagccctcaagaggaaaattcgtgaagatacagtgtttgaa
aaaagttcatcaaaaaacaggaagcattcttcttcttcctcaagtgactctgatagtgat
gatgatgattatgatgacaaaaaaagacacacaaagactagtgataagggaaaggagagg
gaatatcggtctagatatgatgaaacaccaacccacacaggaggggtaaatagagagatt
aaagataaaattattgaaaagcaaaagaaacaaaaggataagtatgttagtgcatcaaca
aaagataaaaaaaaggaaagagaaaggagtagtagggatagggatcataatagagataga
aaatataaaggttctgaaagggagaaaagagacaagcactggcatagggacagacatcgg
aataggtattacagtgaaagaaatgaaagaaatgaaaggagagattatggagatagaagt
gaaatgaatgagagaagaggtgattacagtgaacgatcagatagatcagatagatggaat
gtgtcagaacgatcggaacggtcaggaattcagggagattggtcagaaagatccagtaga
acaccaagattttctgatgccccagaaactcctaagatcccgggggttaaggacacacct
tcacattcttcttgggatgatgatgataacacaccatccaaaacgtcctcatgggattta
cctacacccttctcttctcatcgccgatctcaggacattgattggtctatacgaagtagt
aaccagtctgtgagagagaggtcgcctccaagcagaaagccttatcagcatagtgataga
acaccactgccaacaccttcatataaatataatgcatggatgacagaaagaggaaataaa
gaggaaagagaattcgaagatgaagaagagagagagaagtgggaggaagaggaaaagaga
ttagatcgacagtggtatgatatggaccaaggttatgatgacactaacaacccattttct
gatgtatctgctgagtatgagagaaagaaaactgaaaagattgagaaaagtaagaggaag
atgagtgctaaacagaggcagatccacaaagacaatgagttgtgggaaacaaacagaatg
ttaactagtggcgttgtacaaaaaattgactacgatgaagattttgaagaggagtttagc
aatcgtgtccacattttggtgcataacattgttcctcccttccttgatggacgtattgtg
tttactaaacaaccagagccagtgattcctgtaaaggactccacctctgacatggctatt
gtatccagaaagggctctgcagttgtgaaagcacaacgtgaacagcgagaacgccgaaaa
gctgcaaaaaaagaatgggaacttgccggcactcaactgggtaatctcataggtatcaag
aaagaggatgtcactgatgacaggaaaattgaagaaggtgaaactgattataaagcagat
cagaagtttgctgaacacatgaaagcagcatctgaagcaagtagtgattttgccagaaag
aaatcaatcagagagcagcgtcagtttcttccggtctttgctgtaagagaagaacttctc
cgtatcatacgagaaaactccgtggttatcattgttggtgaaacaggaagtggaaagaca
acacagttaactcagtaccttcatgaggaagggtatagtaaactaggtatgattgggtgt
acacagccacgtagagtagctgctatgtctgttgccaagcgtgtatctgatgaaatgggt
actcgtcttggggaagaagtagggtatgccattcgatttgaggactgtaccagtgaaaag
accattatgaaatacatgactgatggcatattacttcgtgaatctttacgtgagagtgat
ttagacaattacagtgcagttataatggacgaggctcatgaacggtcactcagtactgat
gtactgtttggtttactccgtgaagttgttgcccgtagacaagacttgaaacttattgtc
acatctgctactatggattcccagaagtttgccactttctttggtgaagttcctgtattt
accatcccaggacgaactttcccagtcgaattgtttttctcccgtaatgttgtggaggac
tatgttgaggcagcagtaaagcaggcattacagatacaccttcaggctgatgagggtgat
attttagtcttcatgccaggtcaggaagacattgaagtgacatgtgagctgattgtagaa
aagttgtccgagattgataatgccccacagttggctgtattacccatctactcgcaacta
ccatcggatttacaagccaagatctttcagcgcgctccagatggccttcggaagtgtgtt
gtagctactaatattgctgagacttccctcacagtggatggtattaagtatgtggtggac
tctggatactgcaaattaaaggtattcaatccacgggtgggtatggatggccttcaggtt
tatcctgtctcccaggctaatgccaaccagcgtcttgggagagctggtcgtacagggcct
ggtatgtgttaccgtctgtatacagagcgccagtataaggacgaacttttacccacaaca
gttccagaaatacagcgcaccaatttagcaaatgtagtactcctccttaagtctttagga
gtagaagatcttctaaaatttcatttcatggatcctcctcctcaagacaatttactaaat
tcacaatatcagttgtggatacttggagccttggacaacacaggtgttttgaccaaactg
gggcgtgcaatggtcgagtttccacttgacccagcactttccaagatgttgctggctgca
gtggatatgcgatgttctgaagaaatcttgaccatagtatctatgttatcagtgccagca
ttgttttaccgtcccaaaggccgtgaagaggaggcagatgcaatgcgtgaaaagtttcag
gtaccagaatcagatcatctgacataccttaatatctatcgacaatggcgtctccagaag
tattccatgaattggtgcaataagcacttccttcactttaaagctttaaagaaagtaagg
gaagtgaggcaacagcttcatgatattatggaccaacaaaaactagaagttgttagctgt
ggcatggatgaagatttggtacggaaatgcatctgcgctgcatacttccaccaagcatgt
cgtctcaaaggtattggggaatatgtcaacttgcgaactggaacaccttgccatcttcat
ccaacttcagcattgtttggcatgggttacactcctgattatattgtttaccatgagcta
gtcatgacaagcaaggagtatatgcagtgtgtgacagcagttgagggaagctggctggct
gaagttggggataagttttacagcatcaatgaaggaggtacatcacgattggaaaaacgt
cgtcaggcactagcgcacaaggcagctatggaggcggagatggacagggctcaggataca
ttaaaggctcgggctgaggagaggcaacgcaaacaagattcatcccatcgtcaacaagtg
tatgatattggcacacctagacgcttacaaacaccagcccgctttggtatttaa
DBGET
integrated database retrieval system
