KEGG   Panulirus ornatus (ornate spiny lobster): 139750904
Entry
139750904         CDS       T10834                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
porn  Panulirus ornatus (ornate spiny lobster)
Pathway
porn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:porn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    139750904
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:porn03021]
    139750904
   03036 Chromosome and associated proteins [BR:porn03036]
    139750904
Transcription machinery [BR:porn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     139750904
   Coactivators
    SAGA/TFTC/STAGA complex
     139750904
Chromosome and associated proteins [BR:porn03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     139750904
    STAGA complex
     139750904
    TFTC complex
     139750904
    SAGA complex
     139750904
    SLIK complex
     139750904
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd TFIID_NTD2 WDR55 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_HPS5 Ge1_WD40 Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR54 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N eIF2A PROPPIN Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 139750904
NCBI-ProteinID: XP_071521889
LinkDB
Position
10:36581855..36815144
AA seq 578 aa
MMEASEPCRSELSQVLFPLFIHLYLELVAGTGRQAAKKFFIKHYQVFLVNREYENTLSQV
LNAANINASGDMNSSPIIQNLKSGKYLVRLSELTLNYFLRYLKATENPTLLQIFNSYIEV
EVDDSGAGGSGAVFRSPDPSSTSSNALVNGHTPESMSSDTVISTADGLDCSQEELQKVKD
VIAQVKLAQPASPSLCVYTVSNAYNGLSCASVNAEGRLLSCGFEDSVIKLWKLTPPVHNV
GFGKTSSLVGPRGGISHTLLACDNSRIEDDGEGLEEEEREEEEAAAESRNGGRRRNRGGE
LFALRGHSGPVFDTAFIHDSSHLLSVSEDTTMRLWNLESGQAVAMYKGHYYPVWCVAVSP
LSMYVATGSYDTTARIWSTDCTYPLRTMAGHTQAVDCVAFHPNGTYVATGSCDRTVRLWQ
ITDGDAARILLHHKAAINAIAFSPNGKYLASGSEDGAVAVWDLAGGRVMTDLCGGGQANS
GNTEVTLHMDSMVGLCWSSDSSLLVSASIDGCVRTSHLRQAPASDGGSAWELNEVCQAQC
NGSTNGGMGNNGGGGQLLHMSLTSHNYLTAVIALDVER
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgatggaggcaagtgaaccatgccgttctgagttgtcacaggtgcttttcccacttttc
atccatctctacctggagttggtggctggcactggaagacaagctgctaagaagtttttt
ataaaacattatcaggtgttcctggtaaatcgtgaatatgaaaatacattgtcgcaagtg
ttaaatgcagcaaatataaatgcatctggggatatgaactcctctcccataatacagaat
ctcaagagtggtaaatatttggtgcgtttaagtgaactgactctgaattacttcttgaga
tacctcaaagccactgagaatccaactctgctgcagatcttcaattcatatatagaggta
gaggtagatgactctggtgctggcggttctggagcagttttccgcagtccagatccaagc
tccacttcttcaaatgcattagttaatggccacacaccagaatccatgtcatcagataca
gtaatatctacagcagatgggttggattgtagtcaggaagagctccaaaaagtgaaagat
gtaatagctcaagtaaaattagctcagcctgcctcaccatcattgtgtgtatatacagtt
tctaatgcatataatggcttgagttgtgctagtgttaatgcagaaggcaggttgctgtca
tgtgggttcgaagatagtgtcatcaaattgtggaaactaacacctccagtgcataatgta
gggtttggaaaaactagctctttggtaggacccagaggtggaatatcacataccctatta
gcttgtgataattcgcgtattgaagatgatggtgaaggcttagaagaggaagaaagagaa
gaagaagaagcagcagcagaatcaaggaatggtgggagaagaagaaaccgtggaggagag
ctttttgccttaaggggacacagtggacctgtttttgacactgcctttatccatgattca
tctcatctcctatctgttagtgaggacacaaccatgcgtctttggaacttagaaagtggt
caagcagttgcaatgtacaagggccattactaccctgtatggtgtgtggctgtttctcca
cttagtatgtatgtagccactggatcatatgataccacagccagaatatggtccactgac
tgcacgtatcctttacgaactatggcaggccacactcaagctgtggattgtgtggcattt
catcccaatggcacatatgtagccactgggtcttgtgatcggacagttaggttgtggcaa
ataacagatggtgatgcagcacgaattctcctccatcataaggctgccatcaatgctata
gcattttctcctaatggaaaataccttgcttcagggagtgaagatggggcagtcgcagtg
tgggatttggctggtggccgggtgatgactgacctctgtggtggaggacaagctaatagt
ggaaatacagaagtcactctgcacatggactccatggtgggcctctgctggtctagtgac
tcctctctcctagtttctgcctccattgatgggtgtgtgcggactagtcatctcagacag
gcacctgctagtgatggaggatctgcatgggagctgaatgaagtgtgccaggctcaatgt
aatggaagtacaaatggaggaatgggcaacaatggaggagggggacaactacttcatatg
tctcttacttcacataactacctcactgctgtcattgcccttgatgttgagagataa

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