Panulirus ornatus (ornate spiny lobster): 139751082
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Entry
139751082 CDS
T10834
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139751082
03041 Spliceosome [BR:
porn03041
]
139751082
03036 Chromosome and associated proteins [BR:
porn03036
]
139751082
Enzymes [BR:
porn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139751082
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139751082
mRNA cycle factors
Common to processing body (P body) and stress granule
139751082
Spliceosome [BR:
porn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139751082
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
139751082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
139751082
NCBI-ProteinID:
XP_071522287
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All DBs
Position
11:5291410..5635478
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AA seq
702 aa
AA seq
DB search
MSNAPTHNGVGLERQFAGLGLEGRDHTGQRGGGRGGRGGGRYIPPHLRSRLEDAPQPPPD
TSDRNSRDGFGSWYGSRGSQNSGRSWDQDRDRDHFGSRDKDRDLFGSKGTCSALTGWVEL
GVGGFLPPRPPTYILLIHPPDTSIRNSRDGFGSWYGSYGPQNTSRTLDLDRVRDRDLFNI
KERNRDRDLFGSSGRKNGDIGTSSYQRRGGGGSTTGGSSGNSGYRGGDGQRFRDHDDRWR
GGRDNRSGGYDDRFREGGGVNGPPRNTRWIEDDRERSSSGGGGSGSRWQDRGNDRDDWSQ
PLPRNEVLEAELFSNAGPSNSGINFDKYDDIPVEATGDDVPMAIGSFSDIKLTEIIRMNI
GLARYERPTPVQKYALPFILAKRDLMACAQTGSGKTAAFLVPILNQIYEQGPIQMKNNNP
RGRSKQYPLALVLAPTRELATQIYDESRKFSYRARVRPCVVYGGADVVAQMRDLSRGCHL
LVATPGRLADMIDRGKIGLDSCKYLVLDEADRMLDMGFEPQIRRIVEEDNMPPTGQRQTL
MFSATFPKEIQRLAQDFLDNYIFLAVGRVGSTSENITQKIVWVAEDDKRSFLLDILNAAG
LDRLNEATKESLTLVFVETKKGADALEEFLYRHGYPVTSIHGDRSQREREDALRVFRSGQ
CPILVATAVAARGHTTVRTWDTDVHQVADRAEPSCAGSYGRA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgcacccacccacaatggagtaggtctagagcggcagtttgctggtctaggc
ttggagggacgagaccacactggtcaacgtggaggtgggcgtgggggccggggaggaggc
cgctacattcccccacatcttaggagcagattagaagacgcaccacagccaccaccagat
acttcagataggaattctagggacggtttcggaagttggtatggttcccgtgggtcccag
aacagtggccgtagctgggaccaggatagagatagagatcattttggcagcagagataaa
gacagagatctgttcggcagcaagggtacgtgcagcgctctgactggctgggtggagctc
ggtgtgggaggtttcttgccgccacgacctcccacttacatcctcctcattcaccctcca
gatacttctattaggaattctagggacggatttggaagttggtatggttcctatgggccc
cagaacactagccgaaccttggacctggacagagtcagagacagagatctgttcaacatc
aaagagagaaatcgagacagagatctgtttggcagcagtggacgaaagaacggggatata
ggaacaagtagctatcagcgacgaggcggcggaggcagcaccactggaggtagtagtggt
aacagtggatacagagggggtgatggacagcgtttcagggatcatgatgatcgctggagg
ggaggtcgtgacaatcgtagtgggggttatgatgatcgcttccgtgaaggtgggggggtg
aatggtccacctcgtaatactcgatggatagaagatgaccgtgaacgttcctcctctggg
ggaggtggttcaggtagccgctggcaggatcgtggaaatgatcgtgatgactggtcacaa
cccctgcctagaaacgaagttctggaagctgagctcttcagtaatgctgggccatcaaac
agtggaataaactttgacaaatatgatgacattcctgtggaagctactggagatgatgtt
cccatggctattggtagcttctcagatatcaagctaacagaaattattaggatgaacata
ggtttagctcgttatgaaagacccacacctgtgcagaaatacgctctgcctttcatcctt
gccaagagagatctgatggcctgtgctcagactggttcaggaaaaactgcagcattctta
gtcccaatcctcaaccagatttatgaacagggtccaattcagatgaagaacaacaatcct
cgaggtcgaagtaagcagtacccacttgccttggttttagcacctactcgtgagttagca
acccaaatatatgatgagtcccgcaagttttcatacagggctcgagtgagaccatgtgta
gtgtatggtggtgcagatgtggtcgctcagatgagagacttatcccgtggttgccacttg
cttgttgctacacctggtcgtcttgctgatatgattgaccgcggcaagattggactggac
tcgtgcaaatacctggtacttgatgaggctgaccgcatgctggacatgggttttgagcct
cagattcgtcgaattgtagaggaggacaacatgcctcccactggccagcgccagacactc
atgttctctgctaccttccctaaagagatccaacgccttgcccaggacttcttggacaat
tacatcttcttggcagtgggtcgtgtcggatcaacatcagaaaatataacgcagaaaatt
gtatgggttgcagaggatgataaacgctccttcctcttggacatcctgaatgctgctggc
cttgaccgattaaatgaagccaccaaggaatccttaaccttagtgtttgtggagactaag
aaaggagcagatgctcttgaggaattcttgtatcgccatggctaccctgtgactagcatt
cacggggatcgcagtcagcgtgagcgtgaggatgctctccgtgtatttcgctcaggccaa
tgccccatcctggtggccactgcagtcgcagcccgtggacacacgacggtacggacctgg
gatactgatgttcatcaagtcgcagaccgagccgagccatcgtgcgctgggtcgtacggt
cgtgcttaa
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