Panulirus ornatus (ornate spiny lobster): 139751492
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Entry
139751492 CDS
T10834
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139751492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
porn03009
]
139751492
Ribosome biogenesis [BR:
porn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
139751492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
PEP5_VPS11_N
Beta-prop_NWD2_C
WDR54
BigA_N
Beta-prop_SPT8
WD40_like
Nbas_N
Motif
Other DBs
NCBI-GeneID:
139751492
NCBI-ProteinID:
XP_071523051
LinkDB
All DBs
Position
11:complement(48712507..48751392)
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AA seq
1023 aa
AA seq
DB search
MASKALLKSKFEVEAKYDAYFTGQRVQVTSNGDALLCECGDSVGVISLSTGQVTGRIRCE
EDHVTSIALAPDDSSVIVALKSSSLQQYQWPSLELSRSFKSYHRGPVTVMNWDTTSTLLI
TGAADSSVRVWDLHKKYCTHSLKGASGVFGAVMFDRNLIKCPRVYGAAANTIHVWTLEAG
SSKLDASLEGHHSAVTSLDITEDNTHLVSCGLDRVIILWELATMTNKRVVPVFESLSGFV
LKPLGTVFPGAEAEDDHIYALVVGDKGVPAVWQVDTGREVWKADAPVVTPPDTEGVTLIN
QLTLSTALDSVVMTTYDHSILFSKTCSMDIWKQLAGYNDQILDAVFVGAGESHLVVATNS
IQLRIYNCENFSCHLIQGHTALVLSLARHPTQPEIFASSSHDNSTRVWRLKEDGMAVCIG
SAVGHTLSVGCVALSRGFMVTGSKDMCIKKWTLSKNMVEDSSIDTVIDLCSSHTEKAHDK
EINSICVSVNNKLIATGSQDKTAKIWDSSDLSLLGILRGHQRGIWWVQFSPVDEVLATAS
ADATIKIWAVSDCSNAITLEGHSVSVLRLSWIAQGQQILSTGSDGLLKLWTVKTHECVQT
FDEHEDKAWAIAVSEDEKKVVTGGEDAVLVVWKDVTQEEKEKALEEAARLAAEEQTLSNF
IQNKKWAKAFGISIRLDQPFRALKVMKALLDDTPYELPEVLGKLRQDQIASLLGFAAVWN
TKTKNSREAQSVVNVLLKTHKPEELEALGGWQQALEGLLPYTERHLRRLSALHQSSVILN
YMSSSIYLGNDPEEFNVPPMLDNLELLQNIYNSSATKEGMKTKEEEEGEKDSDIKAALKD
SVLKVDEESDEESSKGKEPEEEDNKDEKVEKSEENEKDKGEMVNKIPPDSVDDLDANFVF
EKIVAESSDDENMEIVSNEEDQIQNSKKRKSFSADQLQLENKRGRDNRGRDNRGRGILRG
RGGTGERGIKRKGRGSSQRVADSEYRFGRHQVNGNSRGHTWRGGHKSRGEPRGKKFNGFK
SQR
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaaagcattattaaagtcaaagtttgaagtcgaagctaaatatgatgcatat
ttcacaggccaacgagtgcaggtaacaagcaatggtgatgccttgttgtgtgagtgtggg
gatagtgtgggtgtgatctctctttctactggtcaagtgacaggccgtattcgttgtgaa
gaagatcatgttacatccattgctctcgctccagatgactcatctgtcattgtagctctt
aagtcctcatccttgcagcaataccaatggccaagcctggaattatcaagaagtttcaag
tcttaccaccgtggtcctgtgaccgtaatgaactgggacaccacatccacattgctcatc
acaggggctgcagattcatcagttcgagtatgggatcttcacaagaaatactgtacacac
agtcttaagggtgcctctggcgtatttggcgcagtgatgtttgaccgtaatctgatcaag
tgccccagagtgtatggtgcagctgctaacaccatacatgtgtggactctagaggctggt
tcatcaaaacttgatgcctctctggagggtcaccattctgctgtcacatcgctggatata
acagaagataacacacaccttgtcagttgcggattggatcgtgttattatactgtgggag
ttggcgaccatgaccaataagagggttgtacctgtgtttgagtctctctcaggatttgtg
cttaaaccccttggtactgtgtttcctggggctgaagcagaggatgatcatatttatgca
ttggttgttggggataaaggagttcctgccgtatggcaagtggatactggtcgggaagta
tggaaagctgacgcaccagtggtgacacctcctgatacagagggagtaacattaattaat
cagttgactctttcaacagcactagactctgtcgtcatgaccacttatgaccattctata
ctcttctcaaagacttgttcaatggatatttggaaacagcttgcaggttataatgatcaa
attctggatgctgtttttgtgggggcaggtgaaagtcatctagtggtagccacaaacagt
atccagctacgcatttacaactgtgaaaactttagctgtcatttgatccaaggacacact
gctcttgtactgtcactggccaggcatccaactcaaccagagatatttgcctcaagttcc
catgacaatagtacacgtgtgtggagattgaaagaagatgggatggctgtttgcataggg
tcagctgtaggtcacacactcagtgttggttgtgttgcactctcacgaggatttatggtg
actggcagcaaagatatgtgcataaaaaaatggactctaagcaaaaatatggttgaagac
agttccattgacactgtgattgacttgtgctcttcgcatacagaaaaagcacatgataaa
gaaattaatagcatatgtgtgtctgttaataataaacttatagcaactggttcacaagac
aaaactgctaagatatgggacagcagtgatttgtcattgttgggaattcttcgaggtcat
caacgaggtatctggtgggtccaattctctcctgtggatgaggttttggctactgcttct
gctgatgccacaatcaaaatctgggctgtgtcagattgtagcaatgcaattaccctagag
ggccacagtgtgagtgtcttgcgactgtcctggattgcacaaggacaacagatactctct
acagggtcagatggtctactgaagttatggaccgtgaaaactcacgagtgtgtgcagaca
tttgatgaacacgaggataaagcttgggctatagctgtgtctgaggatgaaaagaaggtt
gtaacaggtggggaggatgctgtgttggtggtgtggaaagatgtcacacaggaagagaag
gaaaaggcattagaggaggctgccagacttgctgctgaagaacagactttatctaacttc
attcagaataagaagtgggccaaagcctttggtatttccatccgacttgatcagcctttt
cgtgctctaaaagtcatgaaagctttattagatgacaccccatacgaactgccagaagtt
cttggtaagctacggcaagatcaaatagcatcacttttgggatttgcagctgtgtggaac
accaaaaccaaaaattctcgagaggctcagagtgtcgttaatgtcttgctgaagacacac
aaaccagaagaattagaagcactaggaggatggcagcaagcacttgagggactcttaccc
tacacagaacgtcatcttcgacgtctttcagccctccatcagtcgtctgtaattctcaac
tatatgtcttcctccatttatcttggaaatgatccagaggaatttaatgtgcccccaatg
ctggataatttggaactcttacaaaatatatataactcatcagccaccaaagaaggcatg
aagacaaaagaggaagaggagggtgagaaagattcagatattaaagctgcacttaaagat
tctgttttgaaagtggatgaagaaagtgatgaagaaagcagcaaaggtaaagaacctgaa
gaagaggataataaggatgaaaaagttgaaaaaagtgaagaaaatgagaaagacaaagga
gaaatggttaataagataccacctgactctgttgacgacttggatgctaactttgtcttt
gagaagattgttgctgaaagttcagatgatgaaaacatggaaatagtttcaaatgaggaa
gaccaaattcagaactcgaagaaaagaaagagtttctctgcagatcagcttcagctagag
aataaaagagggagagataacagagggagagataacagagggagaggcatcttaagagga
agaggaggtacaggggaaagagggataaagagaaaaggaagaggaagtagccagagagtg
gctgattctgaatacagatttggccgacatcaggttaatggtaatagcagaggccacaca
tggagagggggacacaaaagtagaggtgaacctagaggtaaaaagttcaatgggttcaag
agtcaaagataa
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