Panulirus ornatus (ornate spiny lobster): 139751529
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Entry
139751529 CDS
T10834
Symbol
Col4a1
Name
(RefSeq) uncharacterized protein Col4a1
KO
K06237
collagen type IV alpha
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04382
Cornified envelope formation
porn04512
ECM-receptor interaction
porn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139751529 (Col4a1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139751529 (Col4a1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139751529 (Col4a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
porn04147
]
139751529 (Col4a1)
00536 Glycosaminoglycan binding proteins [BR:
porn00536
]
139751529 (Col4a1)
Exosome [BR:
porn04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
139751529 (Col4a1)
Glycosaminoglycan binding proteins [BR:
porn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139751529 (Col4a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
139751529
NCBI-ProteinID:
XP_071523143
LinkDB
All DBs
Position
11:51597132..52014611
Genome browser
AA seq
2184 aa
AA seq
DB search
MGGSTGGRGIFAPATFLGGSWLCITVLLFAHLHTTESQWSFWSDSSTTEASTTEDIHTNN
QRGAFDYDSQHDDDYEDTYDYDGTGVTHNGSESRLSRESASNSHGSDGSQPYGNTGGTSD
RRYGYNYTYSYGDHVSDPDDRSGGSQSHANTGVPSDRRYNLGSQRYNYSYTYGNQGSDRA
SDQGGDGTYSYNFASRSDEGSNYGDDHSGGDRSSSSSGTYYSNRYGHSSSESEGGRLAGG
RNEGYNSGSVERGYGGYSSDNDRSFSSTNRASNAEGYGGAGESRDGEGYEDDSDSSFGRG
YASRSDTGTGEYGGGLSGSTGQGNRAGSVGGGYGDGSGGSDGEEYGSGRGSRVRYRGGSR
GRFGGTREGNRAGTVGGGYGYGSDGEESWSGSSSSVRYGGESSGSVDRRPVVRGPGDGGG
EYEGRYSSTSVRYGLESSSSASGGGRGGSDGGGGRGRIGAGVESYDGGSYDRYGESFSGP
GYDRSSQPQVQPRPRPRRPTPAGEQECAGGDCSNTGCKCIGEKGSRGSPGLPGPQGEKGQ
QGFPGMEGLIGPKGNKGEPGPQGPTGPKGDRGKMGLNGFPGINGIPGIPGPPGPTGRPGL
DGCNGTDGGAGLPGQPGPPGQRGFRGPEGAKGYKGEPAIGPCPTAKGEKGEPGRNGRQGP
QGPPGLPGTPGEAGYRGTDGLKGEKGNPGPKGDKGPMGLSFVGQPGPKGAKGEKGEDRNC
TGVEQSTNCTITTVLPGMKGDQGMKGDQGAKGDKGDRGSKGRAGPTGPQGEKGLPGYPGP
PGREGVPGPPGPNGYKGDRGPDGLDGLPGLKGGKGDAGFPGLDGEKGSRGPPGPSKGGEP
GPPGPRGLQGLPGLKGRDGSDGIPGERGPQGVRGGPGLAGIPGREGPPGRKGEKGDSGRS
GEPGPQGPPGLQGERGLSGLPGQKGNKCFSIPGEPGRDGTPGRDGIPGDRGLQGPVGPRG
IPGDSIDGIPGSPGEPGDIGFPGIPGNPGLDGFPGLDGAKGDAGQDCECEQCDKGEKGQS
GLPGSPGRQGIRGPPGAIGYAGERGDDGQPGTPGLPGKEGTPGQPGFPGAKGDKGESAFA
LPGLPGSKGEPGRPGQQGLPGIKGERGFSGRVGPPGLPGLKGNIGQRGQRGLDGIIGRKG
EPGRCKKGEPGEPGRLGEQGDKGEPGLPGQDYVQVGDPLNKPGPPGLQGDRGPRGPQGLK
GEPGITGLPGLNGPRGVTGQPGPRGLPGPRGEKGNRGIAGPFGEDGQPGQPGIPGLSGSK
GDKGNEGRSIIGNPGRPGIPGPKGETGLPGLPGKTGEPGSQGTSGVPGIKGAKGESGLHG
LDGTKGTKGDTGLAGRIGLPGPQGLPGLDGEKGIPGPQGTQGRPGVVGFPGPKGERGLPG
LNGIKGATGTPGQPGLPGRPGLDGKPGLGGPKGNMGINGFPGSPGTQGRAGQPGPPGLKG
NIGFTGAPGEPGLPGLKGDQGGKGERGLMGPVGVPGASSEKGEKGSIGLKGEIGLPGTPG
SPGPQGLPGPKGRDAYGRAGAIGDRGPPGPPGLDGLDGKPGPSGSDGVVGFQGLKGAKGL
RGPPGVPGDECDPIQGPPGLLGSQGMKGNPGLPGRNGAKGQAGIPGQPGKDGLPGLSGDK
GTVGPTGLPGAAGQKGSKGEPGPIGFKGNEGRRGSDGRTGPRGEKGNSGFPGAPGLPGID
GLKGERGNPGPRGPRGEVGMTMKGEKGLPGLPGKPGRNGINGEKGEKGDVGFAGLPGQRG
PPGDSGPPGINGAKGDQGPTGPAGLPGRDGGPGFPGQKGLPGPPGDRGFPGQPGSVGPIG
LKGNAGPQGPPGLPCPPGPVGEKGSNGLPGLPGEKGIRGPKGFDGIPGVAGRPGIKGLKG
ERGFPGANGRPGSPGQKGQRGLPGPQGPIGPVGPEGSPGMPGMPGVKGDRGYDGLPGPEG
PSGMKGEHGFKGAPGLIGPPGFAGRKGEPGRACEAQPQYYSGTLVVRHSQTTIPPRCERG
HIRLWEGYSLLYVEGNEKAHHQDLGLAGSCVRRFSTMPFMFCDVNNVCNYASRNDKSYWL
STNDPIPMMPVTDTAIRPYISRCVVCEAPSNVIAVHSQSLSIPDCPNGWSGMWIGYSFVM
HTAAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGTCHYFANKFSFWLATIEERDQFSR
PVSETLKAGSLLTRVSRCQVCIRN
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaagtaccggaggcaggggtatatttgccccagctaccttccttgggggctct
tggctgtgtatcaccgtcctgttattcgctcacctccacacaacagaatcgcaatggtcc
ttttggagtgacagctcaaccactgaggccagcacaacagaagatattcataccaacaat
cagagaggggcatttgattatgattctcaacatgatgatgattatgaagatacatatgac
tatgatggcacaggagtaactcataatggtagtgaaagtagactttctagagagagtgct
tccaatagtcatggcagtgatggtagccagccctacggtaatactgggggtaccagtgac
agacgatatggttataattacacttactcgtatggagatcatgttagtgatcctgatgat
cgaagtggtggcagccagtctcatgcaaacactggggttcccagtgatagaagatacaat
ttaggaagccaaagatataactacagttatacttatggaaatcagggtagtgacagagct
agtgatcaaggaggtgatggcacttactcctataattttgcctctcgcagtgatgaagga
agtaactacggagatgaccatagtggtggtgatagatcaagctctagtagtggtacctat
tatagcaatagatatggccacagcagtagtgaaagtgaaggtggcaggcttgctggtggg
cgaaatgaaggctacaatagtggatctgtagagaggggatatggtggatatagtagtgat
aatgacagaagttttagtagcactaacagggcaagtaatgcagaaggttatggtggtgct
ggtgaaagcagagatggagaggggtatgaagatgatagcgatagtagttttggaagagga
tatgcttctagaagtgatactggtaccggagaatatggaggtggccttagtggtagcact
ggacaaggaaatagagctggtagtgttggaggaggatatggagatggcagtggtggtagt
gatggtgaagaatatggaagtggaaggggtagtagagtaaggtacagaggtggaagcaga
ggtcgttttggtggcactcgagaaggaaatagagctggcactgttggaggaggatatgga
tatggtagtgatggtgaagaatcttggtctggaagttctagcagtgtaagatatggaggt
gaaagcagtggtagtgttgatagaagacctgtagttagagggcctggtgatggaggtgga
gagtatgaaggtagatacagtagtacttctgtcaggtatggattagaaagcagtagcagt
gctagtggaggaggtagaggtggtagtgatggtgggggtggacgtggcagaattggtgct
ggtgtggaaagttatgatggtggcagttatgataggtatggagaaagcttcagtggtcct
gggtatgatcgttcatcacagccacaagttcagcctcgccctcgtcctagacgccctaca
ccagctggtgagcaagaatgtgctggtggcgactgtagcaacactggctgcaagtgtata
ggagaaaaaggttcaaggggatcacctggactaccaggcccccaaggagagaagggtcaa
cagggatttcctggaatggagggtcttataggaccaaaaggaaataaaggagagccaggc
ccacagggtcctacagggcccaaaggtgataggggtaaaatgggactgaatggcttccca
ggcatcaatggaatcccaggcatccccggtcccccaggccccactggaagaccaggtctt
gacggctgcaatggtacagatggtggagcaggtttgccaggtcaaccagggcccccagga
caacgaggtttccgtggcccagagggtgctaagggatataagggagaaccagccattgga
ccttgccccacagctaaaggtgaaaagggagaaccaggtcgtaatggtagacaaggacct
caaggacctcctggtttacctggtaccccgggtgaagctggttatcgaggaactgatgga
ctaaagggagagaaaggtaatccaggccccaaaggagacaagggcccaatgggcttatcc
tttgttggtcaaccagggccaaaaggtgcaaagggtgaaaagggtgaggatagaaactgc
actggtgtagagcagtctaccaattgtaccataacaactgtgttaccgggaatgaagggt
gaccaaggaatgaaaggtgaccaaggagcaaaaggcgataaaggtgacagaggcagcaaa
ggccgtgcaggcccaactgggccacagggagaaaaaggtcttcctggttatccaggacca
ccaggacgtgaaggtgttcctggtcctccaggacctaatggttacaagggtgatcgtggt
ccagatggattggatggtctcccaggactgaaaggagggaaaggggatgctggtttccca
ggtcttgatggtgaaaagggcagtcgtggcccaccaggaccttcaaagggtggagaaccg
ggacctcctggaccacggggcctgcaaggtttgccaggtctcaaaggaagagatggtagt
gatggtattccaggggaacgaggacctcaaggtgtacgtgggggaccaggactggctggt
attcctggaagagagggacctccaggaaggaaaggagaaaagggtgattcaggtcgatca
ggtgagccaggaccccaaggaccacctggacttcagggtgaacgtggtttgtcgggactt
ccaggtcagaaggggaacaaatgcttttccattccaggagagccaggacgagatggaaca
ccaggacgtgatggcatacctggtgaccgagggttacaaggcccagttggccctcggggt
attcctggggatagtattgatggaatcccgggatcccctggggaaccaggagatattggt
tttcctggtattcctggtaatcctggattagatggttttccaggccttgatggagcaaaa
ggtgatgcaggtcaggactgtgaatgtgagcagtgtgataaaggtgagaaaggccagtct
ggacttccaggatcacctggacgtcaagggataagaggcccaccaggtgctattggctat
gcaggagagagaggtgatgatggccagccaggaacaccaggtttacctggcaaggagggt
accccaggccaacctggttttccaggggcaaaaggtgacaaaggtgaatcagcatttgcc
ctgccaggccttccaggttctaagggtgaaccaggccgacctggacaacaaggtctccca
ggaataaaaggagaaagaggcttctcaggaagagttggcccaccaggcttaccaggttta
aaggggaacattggacaaagaggtcaaagaggtctggatggtatcattggtcgtaaaggt
gaacctggacgttgtaagaagggggaacctggagaacctggtcgtctaggtgagcagggt
gacaaaggagaaccaggtctacctggtcaggattatgtacaagttggagatcctttgaac
aaaccaggccctccaggcttacagggtgatcgtggaccaagaggacctcagggccttaaa
ggagaaccaggaattacgggccttccaggtttaaatggtccaagaggtgtcactggtcaa
cctggaccacgtggtctgccaggaccaaggggtgaaaagggaaacagaggtattgcaggc
ccctttggtgaagatggtcagccagggcagccaggcatcccaggtttatctggaagtaaa
ggtgataagggaaatgaaggacggtcaatcattggaaatccaggacgaccaggtatccca
ggaccgaaaggtgaaacaggtttgcctgggttgccaggaaaaacaggagagcctggttct
caaggtacttcaggcgttcctggtattaaaggtgcaaaaggtgaatctggtcttcatggc
ctggatgggacaaagggcacaaagggtgacactggcttagctggacgcattggtttgcct
ggacctcaagggcttccaggtcttgatggagagaaaggtatcccaggccctcaaggtacc
caaggtcggcctggtgttgtcggcttcccaggacctaagggagagcgtggactccctggt
ctgaatgggatcaagggtgccactggcactccaggtcaaccaggtttgcctggacgacct
ggacttgatgggaaaccaggcttaggtggacctaaggggaatatgggcatcaatggtttc
ccagggagccctggtacccaaggaagagcaggccaacctgggcctcctggactgaaaggt
aacataggttttacaggagcccctggagagcctggccttcctggattaaaaggagatcaa
ggtggcaaaggtgaacgaggacttatgggcccagttggagtaccaggagcatcttcagaa
aagggggaaaagggtagcataggtctgaaaggagaaattggtctgccaggaacaccagga
tcaccaggaccccaaggtcttcctggtccaaagggaagagatgcatatggtcgtgcaggt
gctataggtgaccgaggacctcctggcccacctggtctggatggtctggatggaaaacca
ggtccttcaggaagtgatggagtagttggcttccagggactgaagggtgcaaagggacta
cgtggaccacctggagtgcctggagatgaatgtgaccccatccaaggcccacctgggttg
cttggatctcaaggcatgaagggtaaccctggactccccggtcgtaatggtgcaaaaggc
caagcaggcattccaggtcagccagggaaagatggattaccaggtctatcaggtgataaa
ggtactgtaggtcctactggtttaccaggtgctgcaggtcaaaagggaagcaagggagag
cctggccctattggctttaaaggaaatgaaggcagacgaggttctgatggtcgcactgga
cctaggggtgaaaagggtaattctggattccctggtgcaccaggactaccaggaatagat
ggactgaaaggtgaaaggggtaatcctggtcctcggggtcctcggggtgaagttggcatg
actatgaagggtgaaaaaggccttcctggcttacctggaaagcctggtcgcaatggtata
aatggagaaaagggtgagaagggtgatgttggctttgcaggactacctggacaacgtggt
cctcctggtgattctggtccccctggtatcaatggggctaaaggtgatcaaggcccaact
ggtcctgctgggttacctggacgagatgggggacctggattcccaggtcagaaaggtttg
ccaggacctccaggagacagaggtttcccaggccaaccagggtctgtaggaccaattggt
ttgaaaggtaatgctggtcctcaaggtcctcctggcttaccatgtcctccaggacctgta
ggtgaaaagggcagcaatggtttgccaggtctgccaggagagaagggcattagaggtcca
aagggctttgatggaattccaggtgtagctggtagacctggaatcaaaggccttaaaggt
gaacgaggtttcccaggcgctaatggccgacccggcagtcccggacaaaagggtcagcgt
ggtttgcctggaccacaagggccaataggaccagtaggacctgaaggtagcccaggtatg
cctgggatgcctggtgttaaaggagatcgtggctatgacggattacctggacctgaagga
ccttcggggatgaaaggagaacatggtttcaaaggagcacctggacttataggaccacca
ggttttgctggaaggaaaggagaaccagggagggcctgtgaagctcaaccacagtattat
tcaggtacactggtagtacggcattctcaaactacaattcctccaaggtgtgaacgaggc
catatcagactatgggagggatattccctattatacgttgagggcaatgaaaaggctcat
catcaagatttaggattggctggttcctgtgtaagaagattcagcacaatgccatttatg
ttttgcgacgtcaataatgtatgcaactatgcttctagaaatgacaaatcatattggctg
tcaacaaatgatcctattcctatgatgcctgtaactgacactgccattcgaccatacatt
tcaagatgtgtggtgtgtgaagctccatcaaatgttattgctgtccacagccagtccttg
agtattccagattgtccaaatggatggtcgggcatgtggattggctactcttttgtaatg
catactgctgctggtgcagagggaggtggccagtccctaagtagtccagggtcatgttta
gaggacttcagagccacaccattcattgagtgtaatggggcaagaggaacatgccactac
tttgccaacaaatttagtttctggcttgctaccattgaggagagagaccagttttcacgg
ccagtgtcagaaactcttaaagcaggcagtctgctgactcgggtttcgagatgccaagtc
tgcattagaaattaa
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integrated database retrieval system
