Panulirus ornatus (ornate spiny lobster): 139751873
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Entry
139751873 CDS
T10834
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like isoform X1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139751873
04121 Ubiquitin system [BR:
porn04121
]
139751873
Enzymes [BR:
porn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139751873
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139751873
Ubiquitin system [BR:
porn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139751873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
SGL
DUF5128
zf-B_box
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4_2
Vgb_lyase
zf-RING_2
zf-RING_5
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
139751873
NCBI-ProteinID:
XP_071523616
LinkDB
All DBs
Position
12:24235955..24301299
Genome browser
AA seq
868 aa
AA seq
DB search
MPWARMASAYPGGLGSAKERLDGLGPAGLGGLGGGGLGGLGVAVSMASGRSSGDGLSLGN
NSSGGICPLCLGGLEEARVLPCLHAICGPCFDSLLVGTTLACPTCHREINLDQPLDALNP
PVFLPSILDMVSADDDITNPPPPSSMVSPSASHVNSREQLLPLPLLHNELASNCRNPYLC
ASCDDRQAATSRCRDCNEALCDSCVRAHQRVRLTKDHFIIRMPNEDGNGAIGVAGNGNGG
GTVRSHFPDDNSHTSLNLASPPPAIPSHSSPRPSVIYCNLHEGEVIRLYCEMCNTAICRE
CTLRDHRGHSFIYLQDAAESSRSVTMKLLTDARTGIRAIEDSIGVTKRMVDRVDLRAQAV
ASDVRTTTRRHISALEDRERKLLHKVERIRQVKGKTLQDQIDDLSNALARLTHTVDTLGS
SVDSANHLELLQTRDKVLAEMNELRQIKAHLSPHEDDNILFTPPDNSLYQAIGSMGYISS
SGYAPNSIAVGNGLKQAVRGKLATFLVQGKDHLADQRLVGGDQVIVTLHGPDGIAFKADV
QDRGNGSYLVTYRPQLEGQHMIAVLMRGMHIQGSPYTVQVKSGRSYANVGPVLLTIGGEG
EGDGQLCRPWGVCCDKDGYIIIADRSNNRIQVFSPDGSFHHCFGTAGSRPGQFDRPAGVA
ADQMGRIIVADKDNHRIQVFTFDGSFLFKFGEKGSKNGQFNYPWDVATNAEGHIAVSDTR
NHRVQIFRHDGTFLNKYGFEGALWKHFDSPRGVCFNPEGHIVVTDFNNHRLLVIHPDFQS
ARFLGNEGSASGQFLRPQGIAIDQEGHIVVADSRNHRIQVFHPNGNFMCKFGMPGSAPGQ
LDRPSGICISPDGYIIVVDFGNNRVQVF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgccctgggcgaggatggcgagtgcatacccaggtgggctgggcagcgctaaggagcgg
ctggatgggctggggccagccggactgggtgggttgggtggaggcgggttgggcgggctg
ggcgtggcggtgtcgatggctagtggaaggtccagtggagatgggttgagtttgggcaat
aatagcagtggtggaatatgtcctctttgtttaggaggacttgaggaggctcgtgtgttg
ccttgccttcatgctatttgtggcccgtgttttgactctcttctagtgggcaccacacta
gcatgccccacatgtcaccgtgaaatcaatcttgatcagccccttgatgcactaaatcct
ccagtcttcctaccttcaattcttgacatggtgtcagcagatgatgacattaccaaccct
ccacccccatccagcatggttagcccctctgcatcgcatgtgaacagtcgtgagcagctg
cttccactaccactccttcataacgagctggctagtaattgtcgaaatccttatctgtgt
gcaagctgtgatgataggcaggcagccacctcccgctgccgagattgtaacgaagccctc
tgtgactcgtgtgtccgtgctcatcagcgtgttcgtctcactaaagaccatttcattatt
cgaatgccaaacgaagatggcaatggtgctattggcgttgctggtaatgggaatgggggt
ggaacagttcgctcccattttccagatgacaactcccatacatctcttaatcttgcctct
cctcctccagccattccttcacattcctctccacgcccttctgttatttattgcaacttg
catgaaggggaggtgattcgattgtactgcgaaatgtgcaatactgccatttgtcgggag
tgtactctacgtgatcatcgtgggcattctttcatttatctccaagatgctgcagagagc
tcccgctctgttacgatgaagctactcactgatgcccgaactgggatccgtgctatcgaa
gacagtattggtgttactaaacgtatggtggaccgtgtagatcttcgagctcaagctgta
gcaagtgatgttcgcacaacaacacgtcgccatatatctgcattagaagatcgggaacga
aaattgttacacaaagtagaaagaatccgtcaagttaaaggtaaaacacttcaggaccaa
attgatgatttaagcaatgctcttgcaaggcttacccacactgttgatactcttggctct
tctgttgactcggccaaccacttagaactccttcaaacacgagataaagttttggctgaa
atgaatgaattaaggcaaattaaagcccatctaagccctcatgaagatgataatattctg
ttcactccccctgataattctctttaccaggctattggctcaatgggttatatttcttcc
tcaggatacgctccaaattctattgctgttggaaatggactgaaacaagcagtaagaggg
aaattagccacttttttagtgcaaggaaaagatcatcttgcagaccagagacttgttggt
ggtgaccaggtgattgtaactcttcatggccctgatggaatagcttttaaggctgatgtt
caagaccgaggtaatggttcatacttggtgacctatcgaccacagttggaaggccagcat
atgattgctgtgcttatgcgtggaatgcatatacagggatccccatatactgtacaagta
aaatctggtcgaagttatgccaatgtgggccctgtacttctcaccataggaggcgaagga
gagggcgatggtcagttatgccgtccatggggagtgtgctgtgataaagatgggtatatc
atcattgctgaccgtagtaacaaccgtatacaagttttcagtccggatggcagctttcac
cactgctttggaactgctggctcacgaccaggacagtttgatagacctgctggtgtggca
gcagatcaaatgggaagaattattgtggctgataaggataatcatcgtattcaagtgttt
actttcgatggatcctttctattcaagtttggtgagaagggtagcaaaaatggacaattc
aattatccctgggatgttgcaaccaatgcagaaggtcatattgcagtctctgatacccga
aatcaccgtgtccagatctttcgacatgatggcacatttttgaataagtatgggtttgag
ggtgcactttggaaacacttcgactcaccacgtggtgtttgcttcaaccctgaaggtcac
attgttgtcacagacttcaataatcatcgacttcttgtgattcatccagattttcagtcg
gccaggtttcttggaaatgaaggttcagcatcaggacagttcttgagaccacaaggtata
gctattgatcaggaaggacacattgttgtggcagattctcgaaatcaccgcattcaagta
ttccatcccaatggtaatttcatgtgcaagtttggaatgcctggatctgcaccagggcag
cttgaccgccctagtggaatctgcatttctccagatggttacatcattgtggtggacttt
ggtaacaaccgggtgcaggtgttctga
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