Panulirus ornatus (ornate spiny lobster): 139752137
Help
Entry
139752137 CDS
T10834
Symbol
fand
Name
(RefSeq) pre-mRNA-splicing factor SYF1 isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139752137 (fand)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139752137 (fand)
03041 Spliceosome [BR:
porn03041
]
139752137 (fand)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139752137 (fand)
Spliceosome [BR:
porn03041
]
Complex B
Other components
Prp19-related factors
139752137 (fand)
Complex C
139752137 (fand)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
NRDE-2
TPR_8
ARM_TT21_C
DUF7041
Motif
Other DBs
NCBI-GeneID:
139752137
NCBI-ProteinID:
XP_071524159
LinkDB
All DBs
Position
12:complement(63874377..63928914)
Genome browser
AA seq
850 aa
AA seq
DB search
MIMDASSLVIEDDDLQYEEELLRNPFSVKHWLRYIEHKKDASPEKLNKVYERSLLQMPGS
YKLWHQYLRLRMQQVKGRCITDPEFESVNNTFERALVFMHKMPRVWIDYCQFLMNQKKIT
RTRKTFDRALCALPITQHNRIWPLYLKFVMSYSIPETAGRVWRRYLKLCPEDTEDYISYL
ISIGRLEEAAKKYEWCVNTDSFTSKYGKSKHQLWSELCELISKNPQETSLKNAEAIIRHG
LQRYTDQVGMLWNSLAEYYIISALFERARDVYEEGLRSVMTVRDFTQVFDAYAQFEELML
KKRMEEAGNEVDEIDETDLELRLARYEDLMQRRPLLLNSVMLRQNPHNVLEWQKRVTLYE
GKPKMIVATYMEAVKTIDPKQATGKLFSLWVNFAKFYEENNQIVDARIIFQRSTEVPYVK
VDDLASVWCEWAEMEIRHDNEEEALKLMKRATAPPPHKVAYNDESEPVQRRLYKSLKLWS
MYADLEECMGTFKSCKAVYDRIIDLRIATPQIIINYGMFLQENNYFEEAFKAYEKGISLF
KWPYVYDIWNTYLTKFLERYKGNKIERARDLFEQCLEKCPASYARNLYLLYAKMEEEYGL
ARHAMQVYSRATKAVPPEEKLSIYNIYLQHAQQIYGVTRTREIYQEAIDDLPDEGARVMC
LRFAEMERKLGEIDRAREIYAYCSQICDPRITQEFWAKWTDFEVAHGNEDTMKELLRIKR
SMQAKYNTQVNMMSAQMLASADTVAGTVSDLAPGAKDGMRMLEARAVAMNQLEEQNPPMT
HAPPAGGSKILFVRGSTTKQDEEVADTARTANPDEIDLDDDDDEEEDEEEDDLPQQREVP
SAVFGQLKKD
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgataatggatgcctcatctcttgttattgaagacgatgatcttcagtatgaagaggaa
cttttacgaaaccctttttcagtgaaacattggcttcgttatatagaacacaaaaaggat
gcttctccagagaagctgaataaggtttatgaacgatcactgcttcaaatgcctggaagt
tacaagctttggcaccagtatttgagattacgaatgcagcaggtgaaaggaaggtgcatc
acagacccagagtttgagagtgtcaataatacctttgaacgtgctctagtgttcatgcac
aagatgcctcgtgtttggatagactattgccagtttttgatgaatcagaaaaaaataaca
agaacgaggaagacttttgaccgtgccctttgtgctctacccatcacacagcataaccgc
atatggcccctatacctcaagtttgtcatgtcttatagtattccagaaactgctggtaga
gtttggaggagatatttgaagctatgtccagaagacactgaagattacataagttacctc
atatctatagggcgattggaagaagcagcaaagaaatatgaatggtgtgttaatacagac
tcttttacttctaagtatggcaaatccaagcatcagttgtggtctgaactctgtgaactc
atctccaaaaatccccaggaaaccagcctgaagaatgcagaagctatcattcgccatggc
ctacagcgatacacagatcaagtgggtatgctgtggaactctttagcagaatactacatc
attagtgctctgtttgaaagagctcgagatgtatatgaagaagggcttagaagtgtaatg
actgtacgagactttacacaggtgtttgatgcgtatgctcagtttgaagagttaatgttg
aaaaaacgaatggaagaagcaggaaatgaagttgatgaaattgatgaaactgacctggaa
ttacggttggcaagatatgaagatttaatgcagcgaagaccgcttctccttaattcagtc
atgttgcggcagaatccacataatgtattggaatggcagaagagagttactttgtatgaa
ggaaaaccaaaaatgattgttgctacttacatggaagctgtaaaaacgattgaccctaaa
caagcaacagggaagcttttttcgctgtgggttaactttgctaagttttatgaagagaat
aaccaaattgtagatgcacgaattatctttcagcgttccactgaagttccatatgtaaaa
gttgatgatttggccagtgtttggtgtgaatgggcagagatggaaattagacatgacaat
gaagaagaagctctaaagctcatgaaacgggccactgctccaccaccccacaaagttgct
tataatgatgaatcagaacctgtgcaacggcgtttgtataagtctcttaagttgtggtca
atgtatgctgacttggaagagtgtatgggaacatttaaatcatgtaaagctgtatatgat
agaatcattgatttgcggattgcaacacctcagattattatcaattatggaatgttcctg
caggaaaacaactactttgaggaagcatttaaagcttatgaaaaaggaatctccctgttt
aagtggccttatgtatatgacatctggaacacttacctgaccaagtttctggagcgctat
aaagggaacaagatagagcgagctcgcgacctctttgaacagtgcttggagaaatgtcct
gccagttatgctaggaacttgtacctcttatatgccaaaatggaggaagaatatggattg
gcaagacatgcaatgcaggtgtacagccgtgcaaccaaagctgtgccacctgaagagaag
ttgtctatatacaacatatatcttcagcatgctcaacagatttatggtgttacaagaaca
agagagatataccaggaagccattgatgaccttcctgatgaaggtgctcgtgtgatgtgc
ttacgttttgcagagatggaaaggaaattgggtgaaattgaccgtgctcgggaaatatat
gcctattgtagtcagatctgtgatcctcgtattactcaagaattctgggccaagtggaca
gattttgaagtggctcatggcaatgaggataccatgaaggaacttcttcgtattaagcgg
tcaatgcaagccaaatataacactcaggtgaatatgatgtcagcacaaatgttagcatct
gcggacacagttgctggtactgtctcagatcttgctccaggagccaaggatggaatgcgc
atgttagaggcccgtgctgttgctatgaaccagttagaggaacagaatccacctatgaca
catgctcctcctgcaggtggatccaaaatattatttgtacgaggctcaaccactaaacag
gatgaggaagttgccgatacagctcgtactgcaaacccagatgaaattgacttggacgat
gatgatgacgaggaagaggatgaggaagaggatgatcttccacagcaacgagaggttcca
tcagcagtgtttggtcagcttaaaaaagactga
DBGET
integrated database retrieval system
