Panulirus ornatus (ornate spiny lobster): 139752177
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Entry
139752177 CDS
T10834
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03013
Nucleocytoplasmic transport
porn03015
mRNA surveillance pathway
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139752177
09122 Translation
03013 Nucleocytoplasmic transport
139752177
03015 mRNA surveillance pathway
139752177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139752177
03041 Spliceosome [BR:
porn03041
]
139752177
03009 Ribosome biogenesis [BR:
porn03009
]
139752177
03012 Translation factors [BR:
porn03012
]
139752177
Enzymes [BR:
porn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139752177
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139752177
mRNA cycle factors
Stress granule specific factors
139752177
Spliceosome [BR:
porn03041
]
Complex C
Other components
EJC/TREX
139752177
Ribosome biogenesis [BR:
porn03009
]
Eukaryotic type
90S particles
Helicases
139752177
Translation factors [BR:
porn03012
]
Eukaryotic type
Initiation factors
eIF-4
139752177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
TniB
UvrD-helicase
Utp25_C
Motif
Other DBs
NCBI-GeneID:
139752177
NCBI-ProteinID:
XP_071524234
LinkDB
All DBs
Position
12:67893229..67912097
Genome browser
AA seq
402 aa
AA seq
DB search
MADGRIRRVIPEDLSNVEFETSEEVQVVPTFDNMGLREDLLRGIYAYGFEKPSAIQQRAI
KPIIKGRDVIAQAQSGTGKTATFSISILQILDINVRETQVLTLSPTRELAVQIQKVVLAL
GDYMSVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRTLRTRSIKMLVLDEA
DEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHG
DMPQKERDAIMKEFRSGQSRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaaggataagaagagtgattcctgaagatctttcaaatgtcgagtttgag
acgagtgaggaagttcaggtggtgcccacctttgataatatgggccttagagaagatctt
cttcgaggaatatacgcatatgggtttgagaagccttcagctatccaacaacgtgccatc
aaacccattattaagggccgtgatgtaatagcccaagcccagtctggcacagggaaaaca
gccaccttctcaatatctatcctacagattttggatataaatgttcgggagacccaggtc
ctcacactgtcacccacaagggagttggctgtacagattcagaaagttgtgttggcactt
ggggattacatgagtgttcagtgccatgcatgcattggaggaacaaaccttggagaagat
attcgcaagttggactatgggcagcatgtagtgtcaggtactccaggcagagtgtttgac
atgatcagacgtcgtacacttagaactcgttcaataaagatgcttgtgttggatgaagca
gatgagatgctgaataaaggttttaaagaacagatatatgatgtgtaccgctacctacct
ccagccactcaggtggtcctcatctctgcaacattaccacatgagatattggaaatgaca
tcaaaattcatgacagaccccattcgtattctggtgaaacgtgatgaactgacactggaa
ggaataaagcagttctttgtagctgtagagcgtgaggagtggaagtttgacactctatgt
gacctgtatgacacacttactataacccaggctgtcatcttctgtaacacaaagcgtaag
gtagattggctgacagagaagatgcgagaagctaactttacagtatcatcaatgcatgga
gacatgccacagaaagagcgtgatgctatcatgaaggaattccgttcaggccagtctaga
gtcctaatcacaactgatatttgggctcgaggcattgatgtacaacaggtatctttggtg
attaattatgacttgccaaacaaccgtgagttatatatccatcgtattggtcggtcagga
cgttttggtcgtaagggtgtggctatcaattttgtcaagaatgatgacattcgtatcctg
cgagacattgaacagtactactctacacagattgatgaaatgcctatgaatgttgcggat
ctgatttaa
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integrated database retrieval system
