Panulirus ornatus (ornate spiny lobster): 139752695
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Entry
139752695 CDS
T10834
Symbol
Not3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139752695 (Not3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139752695 (Not3)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139752695 (Not3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139752695 (Not3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Secretin_N_2
DUF2433
DUF4407
Motif
Other DBs
NCBI-GeneID:
139752695
NCBI-ProteinID:
XP_071524596
LinkDB
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Position
13:5377636..5439356
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AA seq
749 aa
AA seq
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MAASRKLQGEIDRCLKKVAEGVEQFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWLASGEIKDKSQLLENRKLIETQMERFKVVERETKTKAYSKEGLGAAQNKDPAQRE
REEVNNWLSSSIDTLNIQMDQFESEIESLMATQKKKKMDKDKSDRIEDLKEYIDRHQYHI
KKLEILMRMLDNQSIDCDQIKMIKEDVEYYIESSQDPDFNENLGLYDDIDMDDLDYPTPE
ITVGKHVLGGSHDSTDGSTPSSVCGSSPAPSPATNHSIDHDVPTTPHDKKRSSKNDESRS
VSSTTQPVKPLVVRPATNSITSNSTMNSISSNTNNSSSVSSTSIVVVNSNSSSKATPPPS
TPTKPVPGSTSQTTPNNSSTSSGTSNHIITSSSQHNSTGRHSPEPSGLINSGIVNSSSGS
GSSSSSSSSSSSSCSNSSSGSGNSVSNSTGSGSCSSSSSSSSNGLSSGVSSNVSVTSPQG
SLAGSATTTPALPSGAPTSTPSAHQGHTPTMNATDTAVSLKAIAQKKVNEVNSTSIPPSV
LDGSSCVVSSSSTTTSTNTNSNNNSSSTNSSGKSTGTSEAHIPPLLGVAPLGPAQLTVEH
ELQFKMLQAAFFHMPHPSDSERLRLHLPRQPCQTPLYYPQVSGFNSPVSPPMSDTVDFFQ
RLSTETLFFIFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKAITDEYEQGTY
IYFDYENWGQRKKENFTFEYRFLEDRDLN
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatctagaaaattacaaggtgaaattgatcggtgcctaaaaaaagtggcagag
ggtgtggaacagtttgaagacatttggcaaaaagttcataatgccacgaacagtaaccaa
aaggaaaaatatgaagcagaccttaagaaagagattaaaaagcttcaaagattacgagat
cagatcaagtcctggttagcttcaggtgaaattaaggataaatctcaacttcttgagaac
cgcaaattgatagaaacgcaaatggaaagatttaaggttgttgaaagagaaaccaagacc
aaagcatatagtaaagagggcctaggggcagcacaaaataaagatccagcgcaacgggaa
agagaagaagtaaataattggctcagttcttctatagatacactaaatatacagatggac
cagttcgaatcagaaatcgagtctttaatggcaacgcaaaagaaaaagaagatggacaaa
gataaatctgatagaatagaagacctcaaggaatacatagataggcatcaatatcacatc
aagaaattggagatcttaatgagaatgcttgacaaccaatctatagactgtgaccagatt
aagatgattaaagaggatgtcgagtattacattgagtcttcacaggaccccgacttcaat
gaaaacctcgggttatatgatgacatcgatatggatgacttggactatccaactcctgaa
ataactgtaggcaaacatgtgctgggtgggagtcacgacagcacagatgggtcaacacca
tcatcagtgtgtgggtcatcaccagcaccatcccctgccaccaaccattccatcgaccat
gatgtacctaccacacctcacgataagaagagaagtagtaaaaatgatgagtccagatca
gtcagttcgacaacccagccagtaaaacctttggtagtcagaccagcgaccaacagtatc
actagcaacagtactatgaatagtattagcagtaatacgaataacagcagctctgtttcc
tccacctccattgttgtggtcaactccaattcatcatcaaaggccaccccacctccatcc
acccctacaaagcctgtaccaggatcaacttcacaaactactccaaataacagcagcaca
agttctggaacttctaaccatattatcacctcatcttcacaacacaacagcacaggaaga
cattcaccggaaccaagtggattgataaacagtggtattgtgaatagtagtagtggaagt
ggcagcagcagcagtagcagcagcagcagtagtagcagttgcagcaacagcagtagtggc
agtggcaactctgtatcaaacagcacaggtagtgggagctgcagcagtagtagcagcagc
agcagtaatggtctcagtagtggagtgagcagcaatgtcagcgtaacttcaccgcagggc
agtttagctggcagtgcgactactactccggcattaccatcaggggcaccaacctcaaca
ccatcagcacatcaagggcacacacccactatgaatgctactgacacagcagtgtcatta
aaggcgatagctcagaagaaagttaatgaagttaattccacatcgatacctccttcagtg
ttggatggcagcagttgtgttgtaagcagcagcagtaccactaccagcactaatacaaat
agtaacaacaactccagcagcactaatagttcggggaaaagcacaggaacgtctgaagcc
cacattcctccactattaggtgtagctccacttggcccagcccagttaacagttgagcat
gagctacagtttaaaatgctacaggcggcctttttccacatgcctcacccgtccgattcg
gagagattgagattacacttgccgcgtcagccgtgccagacgccgctctattatccacag
gtgagcggcttcaactcaccggtctcacctcccatgtcagatacagtagacttcttccag
cgactgtcaacagagactctcttctttattttctattatatggagggcacaaaagcccag
tacctggctgcaaaagcacttaaaaagcaatcttggagattccatacaaagtatatgatg
tggttccaacggcatgaagagcctaaggcaatcactgatgaatatgaacagggcacatac
atctacttcgactatgaaaactggggccaacggaagaaggaaaatttcacctttgaatac
cggtttttggaagaccgggacctgaactaa
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