Panulirus ornatus (ornate spiny lobster): 139753753
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Entry
139753753 CDS
T10834
Symbol
alphaCOP
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
porn04131
]
139753753 (alphaCOP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
porn04147
]
139753753 (alphaCOP)
Membrane trafficking [BR:
porn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
139753753 (alphaCOP)
Exosome [BR:
porn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139753753 (alphaCOP)
Exosomal proteins of bladder cancer cells
139753753 (alphaCOP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
139753753
NCBI-ProteinID:
XP_071526669
LinkDB
All DBs
Position
15:23475793..23746425
Genome browser
AA seq
1226 aa
AA seq
DB search
MLTKFETKSARVKGLSFHSKRPWVLASLHSGIIQLWDYRMCTLVDKFDEHEGPVRAVCFH
QQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTEFHQEYPWILSASDDQTIRIW
NWQSRSCVSILTGHNHYVMCARFHPTQDLIVSASLDSTVRVWDISGIPGKPGGLRKKNVS
PGMGGITGGDDHHTRNPELFSAGDATVRHVLEGHDRGVNWAAFHPTLPLVISGSDDRQVK
LWRMNDCKAWEVDTCRGHYNNVSCVMFHPRQELILSNSEDKSIRVWDMAKRICLHTFRRE
HDRFWVLAAHPSLNLFAAGHDSGMIIFKLERERPAYALHGNLLYYVKERFLRRLDLTKNK
DVAIMQLRAGSRAPIYSMSFNPAESAILLTTRAHNVDNSNYDLYQIPKDSDPQNPDAPDS
KRSAGLTAVWVARNRFAVMDKSHQAMIKNMQNEVTKKVTTPPCDEIFYAGTGMLLLRDSD
GVSLFDVQQKRVLGTARIAKCRYVVWSANMTTVALLSKHTILICNRKLERLCSITETNRV
KSGSWDDSGVFVYTTSNHIKYALTNGDHGIIRTLELPVYVTRVSGSSVYCLDRQATPRVL
TIDSTEFRFKLALVQRKYDEVLQMVRGAKLVGQSIIAYLQKKGYPEVALHFVKDERTRFL
LALECGNIDVALDAAKALDDKGCWEKLAEHALLHGNHPVVEYCYQQTKNYDKLSFLYLIT
GNLAKLRRMMKINEIRKDYEGWYTNALYLGDVPERIRVLKACGKTSLALLTAATHGHIQE
AESLTAHVDSAAIPEPLPDAQLLQPPVPVQPMDTPWPLLTVAKGFFDTAVASSKSCVGTV
AAMVVDSTSDIAGDGWGDDEENIDEGDVALEDGDGEGGGWEVDDDLELPPELEGTVSSAV
GTDGEDGYFVPPPRGHPPTHGWTQRSQLAIDHVLAGAFESAARLLHDQVGVVNFEPYREL
FLSSFAHSRTSYPGAPAVPSLFAYPSRNWRTSQSKDQLPALGLRLSNLMDRLKEASQLTT
AAKFSEAVDKLHGILLSVPLIVVDTKQEVSEAQNLLRVCKEYVVGISMELYRKGLGKASP
EDQKRSLELAAYFTHCELQPGHQILTLRTAVNLAFKMKNYKMAMSFGRRLLNLGPRPEVA
QNIRKVVQACEKNPVDEMIVQYDEHNPFTVCASSYVPIYRGKPEVQCPLCGASYLPEFRG
ITCKICTVSEVGKDCIGLRVSLQQFR
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaaattcgagacaaagagtgcgagagtaaagggactgtctttccactctaaa
cgtccctgggtcctggccagcttgcacagtgggatcattcaactatgggattatcgtatg
tgcacactcgtagataaatttgatgagcatgaagggcctgttcgagcagtatgtttccac
cagcagcagccactttttgtctctggtggagatgactacaagatcaaggtgtggaactac
aagctgcggcgatgtctcttcacgttgcttggccacctggattacatccgtacgacagaa
tttcatcaggagtatccatggatcctctctgcctcagatgatcagacaatccgcatatgg
aactggcaaagccgttcatgcgtctccatcctgactgggcacaaccactatgttatgtgt
gcccgatttcaccccacccaagacctcatcgtgtcagcttccctggactcgactgttcga
gtttgggacatctcaggtattcctggcaagcctggaggccttcgtaagaagaatgtctct
cctggcatgggtgggattactggtggtgatgaccaccacacccgcaacccagagcttttt
agtgctggggatgccactgttcgtcatgtactggagggccatgaccgaggtgtgaactgg
gctgcattccatcctactcttccattggtcatatccggctctgatgatcgtcaagtcaaa
ctgtggagaatgaatgattgcaaggcctgggaagtagatacctgccgtggtcactacaac
aatgtgtcatgtgttatgttccacccaagacaagagttgattctttccaactctgaagac
aagtccattcgtgtgtgggacatggccaagagaatatgcctccacacattccgtcgagaa
catgatcgattctgggtcctggctgctcatccctcactcaacctttttgctgctggtcat
gatagtggcatgatcatcttcaagctggaacgagagagacctgcttatgcactgcatggc
aaccttctatattatgttaaggaacgctttctacgtcggcttgacttaaccaaaaataag
gatgttgccattatgcagctgcgtgcaggttcccgtgcaccaatctatagcatgtccttc
aaccctgcagaaagtgcaattctcctaactactcgtgcacacaatgtggataacagcaac
tatgatttataccagattcccaaggattcagaccctcagaaccctgatgcccctgattcc
aaaaggtctgcaggcttaacagctgtatgggttgccaggaaccgatttgctgtcatggat
aagagccatcaggcaatgattaaaaacatgcaaaatgaagtgaccaagaaagttacaact
cctccttgtgatgagatcttttatgctggcacagggatgcttctgctcagggatagtgat
ggtgtgtctctatttgatgtccagcagaaaagagtgctaggaacagctcgcattgccaag
tgtcgctatgtggtgtggtctgccaacatgactactgtggcattgctctccaaacacaca
attctcatttgtaatcgcaaactggaacgcttgtgctccatcaccgagactaatcgggtc
aagtctggctcttgggatgatagtggtgtatttgtttacacaactagcaaccacataaag
tatgccctgacaaatggtgaccatggcattatccgcactcttgaattgccagtttatgta
actcgtgtgtcaggtagctcagtatactgtttggaccgccaggcaacccctcgtgtcctt
accattgattcaacagaattccgcttcaaattagcactggtacagcgtaaatatgatgaa
gtattacaaatggtacgtggagccaaactggtgggacagtccatcattgcatacttacag
aagaaaggttaccctgaagtggccctccattttgtaaaggatgagcggacacgattcctg
ttggccttggaatgtggaaatattgatgttgctctagatgctgcaaaggcactggatgac
aagggatgctgggagaaactagcagaacatgctctcctgcatggtaaccaccctgttgtt
gagtattgttaccagcagaccaagaactatgataaactgtccttcctgtacctcatcact
ggaaatctagccaagctgcgccgtatgatgaaaatcaatgaaatccggaaggactatgaa
ggctggtataccaatgcactgtatctaggagatgtgccagaacgcattagggttttgaag
gcttgtggcaagacgtctctggcacttcttacagcagcaactcatggccacattcaggaa
gcagagtccctaacagcccatgtggacagtgcagccataccagaacctctccctgatgct
cagttgctgcaaccaccagttccagtacagcctatggacactccctggccactacttact
gttgccaagggattcttcgatactgcagttgctagcagcaaaagttgtgtgggtaccgtg
gcagccatggttgttgatagtaccagtgacattgcaggagatggttggggtgatgatgag
gagaatattgatgaaggtgatgtagccttggaagatggggatggtgaaggtggaggctgg
gaggttgatgatgaccttgagctgcctcctgagcttgagggaacagtttcatcagctgtt
ggcactgatggtgaagatggatactttgttcctcctcctcgaggtcatcccccgacacat
ggatggacacagcgcagccagcttgccattgaccatgttcttgctggtgcttttgaatct
gctgctagattgttacatgatcaggttggtgttgtgaacttcgagccttaccgtgagttg
ttcctgtcctcgtttgcccactctcgcaccagctatccaggtgccccagctgtgccctcc
ctttttgcctacccatctcgaaattggcgaacatctcaaagtaaagatcagttacctgct
cttggtttacgtctatcaaatcttatggatagactaaaggaagcttcacagttaactact
gcagccaaattttctgaggcagttgacaaattgcatgggattcttctttcagtaccactt
attgttgtagacacaaagcaggaggttagtgaagctcagaacttattgcgtgtttgcaaa
gaatatgtggttggcatcagcatggaattgtatcgtaagggtcttggcaaggcatctcca
gaagaccagaaacgctctcttgagttggcagcttatttcacccattgtgaactacagcct
ggccaccagattctgactttgcgaactgctgtcaacttagcatttaagatgaagaactat
aagatggccatgagcttcggtcgtcgtctcttgaacctggggccacgtccagaggttgct
caaaatattaggaaggtagtacaggcctgtgagaaaaatcctgtcgatgaaatgatagtt
caatatgatgagcacaatccttttactgtgtgtgccagctcatatgtgccaatataccga
ggaaagccagaggtgcagtgtcctttgtgtggggcatcatacctgccagaattccggggt
atcacctgtaaaatctgtactgtgtcagaagtaggcaaggactgcattggtttgcgtgta
tcattgcagcagtttaggtag
DBGET
integrated database retrieval system
