Panulirus ornatus (ornate spiny lobster): 139753840
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Entry
139753840 CDS
T10834
Symbol
Prp6
Name
(RefSeq) pre-mRNA-processing factor 6 isoform X1
KO
K12855
pre-mRNA-processing factor 6
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139753840 (Prp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
porn03041
]
139753840 (Prp6)
Spliceosome [BR:
porn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
139753840 (Prp6)
Complex C
U5 SnRNP specific factors
139753840 (Prp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
Suf
TPR_16
TPR_17
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_2
TPR_8
TPR_11
TPR_1
ARM_TT21_2nd
ANAPC3
NatA_aux_su
ARM_TT21_C
TPR_21
PIN_12
Hen1_Lam_C
APG6_N
Motif
Other DBs
NCBI-GeneID:
139753840
NCBI-ProteinID:
XP_071526860
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All DBs
Position
2:20007088..20055891
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AA seq
933 aa
AA seq
DB search
MTAPPAALLNKNKKNFIGMPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPN
KRKKKDEDDDEDLNDANYDEFNGYGGSLCSKDPYDKDDEEADAIYDEIDKRMDEKRREYR
EQRLKAELENYRQERPKIQQMFSDLKRELANVSENEWSTIPEVGDARNRKQRNPRAERFT
PLPDSVISHNLGGENVTTIDPGSGLASMMPGTSTPGMLTPSGDLDLRKIGQARNTLMGMR
LNQVSDAVGGQTVVDPKGYLTDLQSMIPQYGGDINDVKKARLLLKSVRETNPNHPPAWIA
SARLEEVTGKIQSARNLVMKGCEMCPKSEDVWLEAARLQPPDMARAVIAQAVQTLPHSPR
IWIKAADLELELKAKKRVYRKALEQIPNSELLWKLAVELEEEEDAKILLSRAVECCPTSV
DLWLALARLEVYENARKVLNKARENNPKDRQIWITAAKLEEANGNSALVGKIIERAISTL
QANMVDINRDFWIKDAMEAEHAGAVLTCQAIIKNIIGYGVEDEDRKHTWMEDADSCATQS
AFECARAIYGHALSIYPKKKSVWLAAAHFERSHGTRESLETLLQQAVTHCPQEETLWLMG
AKSKWLAGDVPAARSILALAFKANPNSEEIWLAAVKLESENNEYERARRLLAKARSQAAT
SKVMMKSAHLEWALGNLDLARTLLDEGIKEVGDFAKLWMMKGQILEQQGQLEAAWEVYRD
AVKRCQSSIPLWRLLASLEEQQGKLVTARATLEKSRVRNPMNDELWLMAIRLELRAGNRE
VSRSLMARALQECPTSGILWAQAIFLEDPAQRKSRSVDALKRCQDDAHVVLAVAKMFWME
AKKNKAREWFNKTVKIDPDLGDAWAWYYKMEMLFGSEEQQQEVQKRCVAADPHHGEHWCS
VSKFIHNWRKKTPEILQLVAEKLPIPVMNREVY
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgactgctccaccggctgctcttctcaacaaaaacaaaaagaatttcattggtatgcct
gcccctctgggatatgtagcaggtgtaggcagaggagcaacaggattcacaacacgttct
gatattggtcctgcacgtgatgccaatgatgtttcagatgatcgacatgcacctcccaat
aagcgcaagaaaaaagatgaagacgatgatgaagatctgaatgatgccaattatgatgag
tttaatggctatggaggatcactgtgtagcaaagacccctatgataaagatgatgaagaa
gctgatgctatatatgatgaaattgataagcgcatggatgagaagaggcgagaatatcgt
gaacaacgtttgaaggcagaattggagaactatcgtcaggagcggccgaagatccagcaa
atgtttagtgatcttaagcgagagttggcaaatgtatcagaaaatgagtggagcacaatt
ccagaagtaggtgatgctaggaacagaaaacaacgtaatccaagagcagagaggtttact
ccccttccagatagtgttatctctcataaccttggaggagagaatgtaacaacaattgat
cctggctctggacttgcctccatgatgccaggaacttcaactcctggaatgctcacccca
agtggtgaccttgatttacgtaaaattggacaggcacggaatactttgatgggcatgaga
ctgaaccaggtgtcagatgctgtgggtggtcaaactgtggttgatcctaaaggttatttg
actgaccttcagagtatgattcctcaatatggaggggatataaatgatgtgaagaaggca
agacttctcctaaaatctgttcgagaaacaaatcctaatcatcctcctgcttggattgca
tcagcacgtctggaggaggtgactgggaagattcagtctgccagaaaccttgttatgaaa
ggttgtgagatgtgtcccaagtcagaagatgtatggttagaagcagctcgactccaaccc
cctgacatggctcgagctgtaattgcacaagctgtgcaaacactcccacattcacccaga
atatggataaaggctgctgacctagagttagaattaaaggcaaagaaacgggtctatcgt
aaggccctggaacaaattcctaattcagaacttttatggaagttggctgttgaattggaa
gaagaggaggacgcaaagattcttcttagtcgtgctgttgaatgttgccctacatctgta
gatctgtggctggccttagctcgattagaagtgtatgaaaatgccagaaaagttcttaac
aaagcacgtgagaacaatccaaaagatcgccagatttggatcactgcagcaaagctagaa
gaagccaacggaaacagtgctttggttggcaaaattattgagcgtgctatttcaacactg
caagctaatatggttgatattaatcgagatttttggatcaaagatgccatggaagctgag
catgctggggctgtacttacttgccaagccattatcaaaaatataattggttatggagtt
gaagatgaggatcggaagcatacctggatggaagatgcagacagctgtgccactcagagt
gccttcgaatgtgcacgtgctatatatggccatgctctttccatataccctaagaaaaaa
tccgtttggcttgcagctgcacattttgagcgtagtcatggtacacgggaatctttggaa
acacttcttcagcaggcagtaacacattgccctcaggaggaaacactgtggctaatggga
gctaaatctaagtggcttgctggtgatgtcccagcagctcggtcaatccttgctctagcc
tttaaagctaatccaaactctgaagagatttggttggcagctgtcaaactggaatcagaa
aataatgaatatgaacgtgcccgtcgtttacttgcgaaagctcgttctcaggcagccact
tctaaagtgatgatgaagtctgctcatttggaatgggcactgggtaatttagacttagcc
agaactttacttgatgaaggtatcaaagaggtaggtgactttgctaaattgtggatgatg
aaaggtcagatcctagaacaacaaggtcagctagaagctgcatgggaagtatacagagat
gctgtcaaacgttgccagtcatctatacctctttggagattattagcatccttggaggag
cagcaaggaaagttggttacagcacgagcaacattagagaaatcaagagtccgtaaccca
atgaatgatgaactgtggctaatggctattcgtttagagcttcgggcaggaaatcgtgaa
gtgagtcgctcactgatggcacgtgcactgcaagagtgccccacatctggtatcctgtgg
gctcaagcaatttttttggaagacccagcacagagaaagagtcgcagtgtagatgcctta
aaacgttgccaagatgatgcacatgttgttctggcagttgctaaaatgttttggatggag
gctaaaaagaacaaagcccgagagtggtttaacaagactgtcaaaattgaccctgatctg
ggtgatgcttgggcttggtattacaaaatggaaatgttatttggctctgaagagcagcag
caggaagtacagaaacggtgtgtagcagctgatccacaccatggggagcactggtgttca
gtttctaaattcatacataattggagaaagaagacaccagaaattcttcagcttgtagca
gaaaagcttcctattcctgtcatgaatagagaagtttactaa
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