KEGG   Panulirus ornatus (ornate spiny lobster): 139753840
Entry
139753840         CDS       T10834                                 
Symbol
Prp6
Name
(RefSeq) pre-mRNA-processing factor 6 isoform X1
  KO
K12855  pre-mRNA-processing factor 6
Organism
porn  Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:porn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139753840 (Prp6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:porn03041]
    139753840 (Prp6)
Spliceosome [BR:porn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    139753840 (Prp6)
 Complex C
   U5 SnRNP specific factors
    139753840 (Prp6)
SSDB
Motif
Pfam: PRP1_N TPR_14 TPR_19 HAT_PRP39_N Suf TPR_16 TPR_17 HAT_PRP39_C HAT_Syf1_CNRKL1_C HAT_Syf1_CNRKL1_N TPR_2 TPR_8 TPR_11 TPR_1 ARM_TT21_2nd ANAPC3 NatA_aux_su ARM_TT21_C TPR_21 PIN_12 Hen1_Lam_C APG6_N
Other DBs
NCBI-GeneID: 139753840
NCBI-ProteinID: XP_071526860
LinkDB
Position
2:20007088..20055891
AA seq 933 aa
MTAPPAALLNKNKKNFIGMPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPN
KRKKKDEDDDEDLNDANYDEFNGYGGSLCSKDPYDKDDEEADAIYDEIDKRMDEKRREYR
EQRLKAELENYRQERPKIQQMFSDLKRELANVSENEWSTIPEVGDARNRKQRNPRAERFT
PLPDSVISHNLGGENVTTIDPGSGLASMMPGTSTPGMLTPSGDLDLRKIGQARNTLMGMR
LNQVSDAVGGQTVVDPKGYLTDLQSMIPQYGGDINDVKKARLLLKSVRETNPNHPPAWIA
SARLEEVTGKIQSARNLVMKGCEMCPKSEDVWLEAARLQPPDMARAVIAQAVQTLPHSPR
IWIKAADLELELKAKKRVYRKALEQIPNSELLWKLAVELEEEEDAKILLSRAVECCPTSV
DLWLALARLEVYENARKVLNKARENNPKDRQIWITAAKLEEANGNSALVGKIIERAISTL
QANMVDINRDFWIKDAMEAEHAGAVLTCQAIIKNIIGYGVEDEDRKHTWMEDADSCATQS
AFECARAIYGHALSIYPKKKSVWLAAAHFERSHGTRESLETLLQQAVTHCPQEETLWLMG
AKSKWLAGDVPAARSILALAFKANPNSEEIWLAAVKLESENNEYERARRLLAKARSQAAT
SKVMMKSAHLEWALGNLDLARTLLDEGIKEVGDFAKLWMMKGQILEQQGQLEAAWEVYRD
AVKRCQSSIPLWRLLASLEEQQGKLVTARATLEKSRVRNPMNDELWLMAIRLELRAGNRE
VSRSLMARALQECPTSGILWAQAIFLEDPAQRKSRSVDALKRCQDDAHVVLAVAKMFWME
AKKNKAREWFNKTVKIDPDLGDAWAWYYKMEMLFGSEEQQQEVQKRCVAADPHHGEHWCS
VSKFIHNWRKKTPEILQLVAEKLPIPVMNREVY
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgactgctccaccggctgctcttctcaacaaaaacaaaaagaatttcattggtatgcct
gcccctctgggatatgtagcaggtgtaggcagaggagcaacaggattcacaacacgttct
gatattggtcctgcacgtgatgccaatgatgtttcagatgatcgacatgcacctcccaat
aagcgcaagaaaaaagatgaagacgatgatgaagatctgaatgatgccaattatgatgag
tttaatggctatggaggatcactgtgtagcaaagacccctatgataaagatgatgaagaa
gctgatgctatatatgatgaaattgataagcgcatggatgagaagaggcgagaatatcgt
gaacaacgtttgaaggcagaattggagaactatcgtcaggagcggccgaagatccagcaa
atgtttagtgatcttaagcgagagttggcaaatgtatcagaaaatgagtggagcacaatt
ccagaagtaggtgatgctaggaacagaaaacaacgtaatccaagagcagagaggtttact
ccccttccagatagtgttatctctcataaccttggaggagagaatgtaacaacaattgat
cctggctctggacttgcctccatgatgccaggaacttcaactcctggaatgctcacccca
agtggtgaccttgatttacgtaaaattggacaggcacggaatactttgatgggcatgaga
ctgaaccaggtgtcagatgctgtgggtggtcaaactgtggttgatcctaaaggttatttg
actgaccttcagagtatgattcctcaatatggaggggatataaatgatgtgaagaaggca
agacttctcctaaaatctgttcgagaaacaaatcctaatcatcctcctgcttggattgca
tcagcacgtctggaggaggtgactgggaagattcagtctgccagaaaccttgttatgaaa
ggttgtgagatgtgtcccaagtcagaagatgtatggttagaagcagctcgactccaaccc
cctgacatggctcgagctgtaattgcacaagctgtgcaaacactcccacattcacccaga
atatggataaaggctgctgacctagagttagaattaaaggcaaagaaacgggtctatcgt
aaggccctggaacaaattcctaattcagaacttttatggaagttggctgttgaattggaa
gaagaggaggacgcaaagattcttcttagtcgtgctgttgaatgttgccctacatctgta
gatctgtggctggccttagctcgattagaagtgtatgaaaatgccagaaaagttcttaac
aaagcacgtgagaacaatccaaaagatcgccagatttggatcactgcagcaaagctagaa
gaagccaacggaaacagtgctttggttggcaaaattattgagcgtgctatttcaacactg
caagctaatatggttgatattaatcgagatttttggatcaaagatgccatggaagctgag
catgctggggctgtacttacttgccaagccattatcaaaaatataattggttatggagtt
gaagatgaggatcggaagcatacctggatggaagatgcagacagctgtgccactcagagt
gccttcgaatgtgcacgtgctatatatggccatgctctttccatataccctaagaaaaaa
tccgtttggcttgcagctgcacattttgagcgtagtcatggtacacgggaatctttggaa
acacttcttcagcaggcagtaacacattgccctcaggaggaaacactgtggctaatggga
gctaaatctaagtggcttgctggtgatgtcccagcagctcggtcaatccttgctctagcc
tttaaagctaatccaaactctgaagagatttggttggcagctgtcaaactggaatcagaa
aataatgaatatgaacgtgcccgtcgtttacttgcgaaagctcgttctcaggcagccact
tctaaagtgatgatgaagtctgctcatttggaatgggcactgggtaatttagacttagcc
agaactttacttgatgaaggtatcaaagaggtaggtgactttgctaaattgtggatgatg
aaaggtcagatcctagaacaacaaggtcagctagaagctgcatgggaagtatacagagat
gctgtcaaacgttgccagtcatctatacctctttggagattattagcatccttggaggag
cagcaaggaaagttggttacagcacgagcaacattagagaaatcaagagtccgtaaccca
atgaatgatgaactgtggctaatggctattcgtttagagcttcgggcaggaaatcgtgaa
gtgagtcgctcactgatggcacgtgcactgcaagagtgccccacatctggtatcctgtgg
gctcaagcaatttttttggaagacccagcacagagaaagagtcgcagtgtagatgcctta
aaacgttgccaagatgatgcacatgttgttctggcagttgctaaaatgttttggatggag
gctaaaaagaacaaagcccgagagtggtttaacaagactgtcaaaattgaccctgatctg
ggtgatgcttgggcttggtattacaaaatggaaatgttatttggctctgaagagcagcag
caggaagtacagaaacggtgtgtagcagctgatccacaccatggggagcactggtgttca
gtttctaaattcatacataattggagaaagaagacaccagaaattcttcagcttgtagca
gaaaagcttcctattcctgtcatgaatagagaagtttactaa

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