Panulirus ornatus (ornate spiny lobster): 139754046
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Entry
139754046 CDS
T10834
Symbol
hay
Name
(RefSeq) general transcription and DNA repair factor IIH helicase/translocase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03022
Basal transcription factors
porn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139754046 (hay)
09124 Replication and repair
03420 Nucleotide excision repair
139754046 (hay)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porn03021
]
139754046 (hay)
03400 DNA repair and recombination proteins [BR:
porn03400
]
139754046 (hay)
Enzymes [BR:
porn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
139754046 (hay)
Transcription machinery [BR:
porn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
139754046 (hay)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
139754046 (hay)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
TniB
AAA_34
DSPn
Motif
Other DBs
NCBI-GeneID:
139754046
NCBI-ProteinID:
XP_071527145
LinkDB
All DBs
Position
16:complement(3188033..3194976)
Genome browser
AA seq
790 aa
AA seq
DB search
MGKRHKFYDKGKKRRREDGFSDEEENLELEGVPQASKQNVEERGDLITPKDHFGAFDYRA
EMELREDHESRPLWIATNGHIFLESFSPVYKHAKDFLITIAEPVCRPEHIHEYKLTAYSL
YAAVSVGLQTHDIIEYLKRLCKTSLPSGICQFIQSCTLSYGKVKLVLKKNRYYVESDFPD
VIQKLIKHPTIQECMLSPNEGIVSTEKQKSQAIMFTSHQAQMAGVTEDQKSEKKTEADTP
NGENKEEKNVPEDITDFYDKIDKADEEEEEEKNLKTLSFEVNQDKIELLQKSCIGLDFPL
LAEYDFKNDTVNEDIKIDLKPSAVLRPYQEKSLRKMFGNGRARSGIIVLPCGAGKSLVGV
TACCTVNKKAIVLCNSGVSVEQWKQQFKMWSTATDDMICRFTSDAKDKPFNASILVTTYA
MISHNQKRAYEAEQTMNWLKEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLV
REDDKIADLNFLIGPKLYEANWLELQKEGFIAKVQCAEVWCPMTPEFYREYLMGKVSDQK
IKLLCAMNPNKFRTCEFLIKYHENRNDKIIVFIDEVFALIHYAKTMQKPYICGKTGQKER
MTIIQNFKLNPKVNTIFFSRVADTSFDIPEANVLIEISSQGGSRRQEAQRLGRILRAKKS
AVAEEFNAFFYALLSQDTREMGYSRKRQSFLINQGYAYQVITPAQMIGMEEEQLHYTSRE
EKVQLLEQILAASEADLYEEGVSSERGGSGSQRRMGNMSSMSGADDSIYGEKRKGSKKDH
QHYLFKKFRS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagacacaaattttatgataaaggaaaaaagcgccggagagaagatggcttc
tctgatgaagaagaaaacttggaactagaaggtgtcccacaagcatcaaaacaaaatgtt
gaggaacgtggagatttgataactccaaaagatcactttggagcttttgattatcgagct
gaaatggaactgagggaagatcatgagtctcgccccctttggatagctactaatggccac
atctttctagaatctttctctccagtgtataaacatgcaaaagatttcctgattactata
gctgaacctgtttgtcgaccagagcacatacatgaatataaattgactgcatactcactg
tatgctgcagttagtgttggtttacagactcatgacattattgaatatctgaagagacta
tgtaagacatctttaccctctggcatttgccaatttatacaaagttgtacactctcatat
ggtaaggttaagttggtcttgaagaaaaatcgttattatgttgaaagtgacttcccagat
gtcattcaaaagctcatcaaacacccaacaattcaggagtgtatgctaagtcctaatgaa
gggatagtgagtacagagaaacagaaatctcaagccatcatgttcacaagtcatcaagct
caaatggcaggtgtcacagaggaccagaagtctgaaaagaaaactgaagcagacacccca
aatggagaaaataaggaagaaaaaaatgtgccagaagatataactgacttttatgataaa
attgacaaagcagatgaagaggaagaggaggagaaaaatctaaagacactttcctttgag
gtaaatcaagacaaaattgaattgttgcaaaagtcttgcataggtctagactttccttta
ttagcagaatatgatttcaagaatgatacagtgaatgaggatattaaaattgatctcaag
ccttcagcagtgttaaggccttatcaggaaaagagtttacggaaaatgtttggaaatggt
cgtgctagatcaggcataattgtactaccatgtggtgctggaaaaagtttagttggcgtc
acagcttgttgtacagttaataaaaaagctattgttctttgcaattctggtgtgtcagta
gaacagtggaaacaacagtttaagatgtggtccacagccacagatgatatgatttgcaga
ttcacctctgatgccaaagataaacctttcaatgcaagtattttagtgacaacatatgct
atgatttctcacaaccagaagcgagcttatgaagcagagcaaaccatgaactggctaaag
gaacaagaatggggtataatggttttggatgaggtgcatactataccagcaaagatgttt
agaagagttcttactattgttcagtcacactgtaaactaggattaactgcaacacttgta
agggaggatgataagattgctgacctcaatttcttaattggtcctaaattgtatgaagca
aattggctagagttacagaaagagggattcattgcaaaggtacagtgtgctgaggtatgg
tgcccaatgacccctgaattttacagagagtatcttatgggaaaggtttcagatcagaaa
attaagctactttgtgctatgaatcctaacaaatttagaacttgtgaatttctcattaag
tatcatgagaaccgtaatgacaagataattgtttttatcgatgaggtttttgcattgatt
cattatgccaaaaccatgcaaaagccttatatttgtggaaagactggacagaaggagaga
atgactatcattcagaacttcaaattaaatccaaaagttaacacaatcttttttagtcga
gtagcagacacttcctttgacattccagaggcaaatgttttgattgaaatatcctctcag
ggtggatctcgtcgccaggaagctcagagattaggccgtattctcagagctaagaagagt
gccgttgcagaggagtttaatgcctttttctatgctcttctttctcaagacactcgagaa
atggggtactcacgtaagagacagagtttccttattaaccaaggttatgcataccaggta
attaccccagctcagatgataggcatggaggaggaacagcttcactatacctcacgtgaa
gagaaagtacagctcttggagcaaatcttagccgcttctgaggctgacttatatgaggaa
ggtgtttctagcgagcgaggaggttctggctcacagcgtcgaatgggtaacatgagttcc
atgtctggtgcagatgattcaatatatggagaaaagagaaagggatcaaaaaaagatcat
cagcattatctcttcaaaaagttcaggtcatga
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integrated database retrieval system
