Panulirus ornatus (ornate spiny lobster): 139754050
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Entry
139754050 CDS
T10834
Symbol
RfC4
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03030
DNA replication
porn03410
Base excision repair
porn03420
Nucleotide excision repair
porn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139754050 (RfC4)
03410 Base excision repair
139754050 (RfC4)
03420 Nucleotide excision repair
139754050 (RfC4)
03430 Mismatch repair
139754050 (RfC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porn03032
]
139754050 (RfC4)
03036 Chromosome and associated proteins [BR:
porn03036
]
139754050 (RfC4)
03400 DNA repair and recombination proteins [BR:
porn03400
]
139754050 (RfC4)
DNA replication proteins [BR:
porn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
139754050 (RfC4)
DNA Replication Termination Factors
ELG1-RFC complex
139754050 (RfC4)
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
139754050 (RfC4)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
139754050 (RfC4)
Check point factors
HRAD17(Rad24)-RFC complex
139754050 (RfC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_14
AAA_22
AAA_16
RCF1-5-like_lid
nSTAND_NTPase5
Viral_helicase1
Rad17
nSTAND3
Mg_chelatase
AAA_assoc_2
RuvB_N
AAA_11
AAA_24
AAA_18
AAA_19
AAA_5
NTPase_1
ABC_tran
AAA_23
RNA_helicase
MipZ
AAA_25
AAA_28
DNAX_ATPase_lid
MeaB
IstB_IS21
ATPase_2
SRP54
AAA_30
Motif
Other DBs
NCBI-GeneID:
139754050
NCBI-ProteinID:
XP_071527154
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All DBs
Position
16:3342783..3353092
Genome browser
AA seq
347 aa
AA seq
DB search
MEAPESSMEVDPPQNSSQSGPSGTKTSHVPWIEKYRPTTFPEIVGNEETVARLEVFAKQG
NVPNIIIAGPPGVGKTTTILCLARALLGPNFKEGVMELNASNDRGIDVVRNKIKIFAQQK
VTLPKGRHKIIILDEADSMTDGAQQALRRTMELYSNTTRFALACNSSEKIIEPIQSRCAM
LRYSKLTDSQVLAKILQVCSKEDLSYTEDGLEAIIFTAQGDMRQALNNLQSTAQGFGHVS
SEHVFKVCDEPHPILIKEMIQHCVKTNFDDAYKILAHLWKLGYAAEDIISNIFRVCKNTN
MAEFLKLEFIKEIGYTHLRIVQGTSTLLQLSGLLARLCSKSLEPPKI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggaagcacctgagagcagcatggaggtggaccctccccaaaactctagtcagagtgga
ccttcaggcactaaaacttcacacgtaccctggattgaaaaatatcgtccaacaactttt
cctgagattgttggtaatgaagagactgtggcaagattggaagtttttgctaaacaaggc
aatgttcctaacatcattatagcaggtcctcctggtgtgggcaagacaaccaccatttta
tgcttagctcgtgcccttctgggccctaacttcaaagaaggtgtaatggaattgaatgcc
tcaaacgaccgtggtattgatgttgtacgcaataaaattaagatttttgctcagcagaaa
gtaaccctcccaaaaggaaggcataaaatcattattctagatgaagcagacagtatgaca
gatggtgcccaacaagctctgagaagaactatggaactttattctaataccactcgcttt
gcattagcttgcaactcttcagaaaaaattatagagccaatccagtcacgatgtgcaatg
cttagatattctaagctcactgactctcaggtgcttgctaaaattctgcaagtatgttca
aaggaagatttaagctacacagaggatggtcttgaagcaataatatttacagctcaaggt
gacatgcgacaagcacttaacaacctccagtccactgcacaaggttttggtcatgtatca
tcagaacatgtgtttaaggtgtgtgatgagccacaccccattttgatcaaagaaatgatt
cagcattgcgttaaaacaaacttcgatgatgcatacaagatcctagcacacctgtggaaa
ttgggttatgctgcagaggatataatcagcaatatcttcagagtctgcaagaatacaaac
atggctgaatttctgaagttagagtttatcaaggagattggatatactcatttacgtatt
gtgcaagggacatccactcttctccagttatcaggactcttggctcgattgtgttccaag
tctcttgaaccacccaaaatataa
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