Panulirus ornatus (ornate spiny lobster): 139754116
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Entry
139754116 CDS
T10834
Symbol
Msh6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139754116 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porn03400
]
139754116 (Msh6)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
139754116 (Msh6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
ENTH
DUF993
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
139754116
NCBI-ProteinID:
XP_071527306
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Position
16:7996371..8032233
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AA seq
1285 aa
AA seq
DB search
MPKQPTLYTFFSKSPGRNQNRSEVTSKNNVKLKGNDVKPMDMVWAKLDGYPWWPALVCES
PSEKDFNRNGQIHVQFFDNPPTRGWVREAFVKPYCPEGENGIPTYKDPAWLKAVQEAKEA
EQVPKEDRSVLIVEMAPSDEEEEMETDEDDSDKSKENVDVNVSKKNNGKNKTDNNEPEKK
RRRIIIHSDSESEDEYKPGKDADESDDESLSSGVDEDHVPEPETESEIDSPVKAPANKRK
RPAPPKRPNLDSSLTSSPSMSKVSTQMPSLPKVSEGTKSKLSLFAAKEAPSAVQESTEEW
PFLKYSWLQPDNIRDRNKLSPDHSDYNPRTLYVPENFLNQQTPGLRQWWELKSRHYDTVL
FFKMGKFYELFNMDAIVGVQELGLIMMKGEKAHVGFPEIAYGRYSSTLIEKGYKVARIEQ
TETPEMMEKRCKNMNRPTKFDRVVRREVCQVSSKGTRVYSVLDGEASEASSSYLLAIAEK
AVRGTGDGSEFGVAFIDTSIGIFHMGQFIDDRHASRLRTLIAHYPPAQILVERGRLSQKT
QMVVNSAVPSNLREFLAPEKEFWTASKTLGFLAEGPYFKVEEGDSTTEWPEELKKMMDDS
DSLGRTACPEYELAVCALGAVTWYLMDCCIEEQLLTRRKFEEYNPVDILGVSKGEKNVSA
PVFISGRHHMVLDGTTLRNLEVFENSAGGTEGTLVDRLDHCSTPFGKRLLRNWICAPLCN
PSSISSRLDAIEDLRNNPDLVEEVVPLLKSLPDLERIIAKIHAQGLNRSSNHPDSRAIFF
EDVKYNKKRVVDFLAALNGFKTTLKILKAFQGVRESLHSSLLRRCMTSVEKGGIFPPLEE
ALQFFDNAFDHDEAQKEGKIIPSPGVDTEYDEAVEKITSTKESLSDYLKEQCKHFGAKVV
YWGNDKKRYQLEVPEHVCRKASDEYELLSQKKGFKRYWTPTTKELLADMIAGEEHRNTAL
NDIARRIFHQFDEHHKKWESVLHCISVLDVVISLKQYSQEANTSRPNIIMPQENTQPFIE
IRDGLHPCVVTTFSGDEFIPNDLVVGGSSEDAHSPLVLVTGPNMGGKSTLMRQTALICIL
AQMGSFVPANLCQMTPIDRIFTRLGASDRIMMGESTFFVELAETSLIIQHASQHSLVLVD
ELGRGTATYDGTAIASAVVEALIKLKCRTLFSTHYHSLVDDFACSKYVSLGHMACMVEGE
NEDDPSQETITFLYKFAKGACPKSYGFNAARLADLPDQVIRRGSQKARQLEKSNAKKRAF
SKMFSITGDGLENVRELVSGIRTIL
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacagcctactttatatacattcttctcgaagtcacctggacgaaaccaaaac
agaagtgaagtgacatccaagaacaatgtgaaactgaagggaaatgatgttaagccaatg
gacatggtttgggccaagctggatgggtatccgtggtggccagcacttgtgtgtgaaagt
cctagtgaaaaagatttcaatcgtaatggtcaaatacatgtacagttttttgacaaccct
ccaacacgaggatgggtcagagaagcgtttgtgaagccatactgtccagaaggagaaaat
ggcatcccaacttataaggatccagcatggctcaaggctgtgcaagaagctaaggaagca
gagcaggttcctaaagaggatagaagtgtgttaattgttgagatggctccctcagatgag
gaagaagaaatggaaactgatgaggatgatagtgacaagagtaaagaaaatgttgatgtt
aatgtaagcaaaaagaacaatggcaagaataaaacagataacaatgaaccagaaaagaaa
cggagaagaatcatcattcattcagacagtgaatctgaagatgaatacaaacctggaaaa
gatgctgatgagagtgatgatgagtcgttaagttctggagtggatgaagaccatgtacca
gagccagaaactgaatcagaaattgattcacctgtcaaggcacctgcaaataagcgtaaa
aggccagcaccacctaagagacctaatttggattcatcccttacatcctccccatctatg
tctaaagtctctacacaaatgccatctttgccaaaagtttctgaaggcacaaaatccaaa
ctgtctctgtttgctgcaaaggaggcaccttcagcagtccaagaaagcactgaagagtgg
ccctttttaaagtattcctggctgcagcctgataacatacgtgacagaaataagttatcc
ccggatcactctgattacaatccaagaacattgtatgttcctgaaaacttcctaaatcag
cagactccaggtttaaggcagtggtgggaactcaaatcacggcactatgacactgttcta
tttttcaagatgggcaaattctatgaactgtttaatatggatgccatagtgggagtacaa
gagcttggcctcattatgatgaagggagaaaaagcacatgtaggtttcccagaaattgct
tatggacgctattcctcaactttgattgaaaagggttacaaagttgcacgtattgagcag
acagaaactccagaaatgatggaaaaacgctgcaagaatatgaatcgtccaacgaaattt
gaccgtgttgtacgacgcgaggtgtgtcaggtgagcagtaaagggacaagagtctacagc
gttttagatggagaagcttcagaagcctcctcatcttacctcttagctattgctgaaaag
gctgttagaggaactggtgatggcagtgaatttggtgtagctttcattgataccagcata
ggaattttccacatgggccagtttattgatgaccgccatgcttcaagacttcgcacctta
attgctcattacccaccagctcagattcttgttgaacgaggacggctctcccaaaagaca
caaatggtggtcaattcagctgtgccttcaaatttacgagagtttctagcacccgagaaa
gaattctggaccgccagtaagacccttggtttcttagctgaagggccatatttcaaagtt
gaggaaggagactcaactacagagtggcctgaagaattgaagaaaatgatggatgatagt
gattcactaggaagaacagcttgtcctgagtatgaacttgcagtatgtgcgttgggtgca
gtcacatggtatctgatggattgttgtatagaagaacagttgcttaccaggcgaaagttt
gaggagtataaccctgttgatatattgggtgtatctaaaggggagaaaaatgtttctgct
ccggtattcattagtggaagacatcatatggtacttgatgggacaactcttcggaactta
gaggtgtttgaaaattctgctggtggcacagaaggaactcttgttgacaggcttgaccac
tgttcaacaccatttggtaagaggttacttcgcaactggatatgtgccccattgtgcaat
ccatcaagtattagtagtcgtttggatgctatagaagatctgcgaaacaaccctgatttg
gtagaggaagtggtacccctccttaagagtttacctgatctggaaaggattattgcaaaa
atccatgctcaaggtttgaaccgcagttcaaatcatccagacagtcgtgccatttttttt
gaggatgtcaaatacaacaagaaaagagttgttgattttttggcagcactgaatggattc
aagacaactttaaaaatcctgaaagctttccaaggtgttagagagtcacttcactcaagc
ctgttacgtaggtgcatgactagtgtggaaaagggtggcatattccctcctctggaagaa
gctcttcagttctttgataatgcttttgatcatgatgaggcccagaaagaaggtaaaatt
atcccaagcccaggtgtggacactgaatacgatgaagcagtggagaagataacaagtact
aaagagagtctttctgactaccttaaggaacagtgcaaacactttggagcaaaagttgtg
tactggggtaatgacaagaagagatatcaactggaagtcccagagcacgtttgtaggaag
gcaagtgatgaatatgaactattaagtcaaaagaaaggcttcaaaagatattggacacca
actactaaggagttgttagcagatatgattgctggagaggaacatcgcaatactgccctt
aatgatatagcacgcaggatattccatcagtttgatgaacatcataaaaagtgggaatca
gtgctgcattgtatatcagtgctagatgttgtgatatctctaaaacagtactcacaggag
gcaaacactagcagaccaaatatcattatgccacaggaaaatacacagccattcatagag
atccgagatggcctccatccatgtgtggtgacaacatttagtggtgatgaattcattcca
aatgacctggttgtgggtggttctagtgaagatgctcattcccctcttgtgttagtcaca
ggacccaacatgggtggtaaatcaactcttatgaggcagactgccctgatctgcatatta
gctcaaatgggatcttttgttccggcaaatttatgccaaatgacaccgatagatcgaata
tttacaaggcttggtgcatctgaccgcatcatgatgggagaatcaacattcttcgtggag
ttagcagaaacatctttaattattcagcatgcatctcaacactcccttgtcttagttgat
gaattgggtcgtggcacagcaacatatgatggcacagcaatagcatccgcagtggtggag
gcactgataaagttaaagtgtcgaacactgttctccactcactaccactccttagttgat
gactttgcctgtagtaaatatgtttctcttggtcatatggcttgtatggtagaaggagaa
aatgaggatgatccgtcacaggaaactataacttttctatataaatttgccaaaggagct
tgcccaaagtcatatggattcaatgctgcacgtttggctgacttgcctgaccaggttatt
cgccgtggtagtcaaaaagcacgtcagttggagaaaagtaatgcgaaaaaacgagcattt
tcaaagatgtttagtataactggtgatggactggaaaatgtaagagaattagtttcgggg
atacggacaattttatga
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