Panulirus ornatus (ornate spiny lobster): 139754212
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Entry
139754212 CDS
T10834
Symbol
spel1
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139754212 (spel1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porn03400
]
139754212 (spel1)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
139754212 (spel1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Fcf2
Motif
Other DBs
NCBI-GeneID:
139754212
NCBI-ProteinID:
XP_071527563
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Position
2:complement(23024421..23103113)
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AA seq
928 aa
AA seq
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MAQLQPKEQLTLDGASEQGFLSFYRGLPEKPNTTVRVFDRGDYYTVHGQDALLAARELFR
TNSVVKYLGSGNNKLESVVLSRLNFESLVRDLLLVKHYRVEVYKTKSSGKNDWEAEHKAS
PGNLSQFEEVLFGANNELTVTTGVMAVKLGTENGQRMVGVGYVDVNGRLMSVSEFSDNDT
FSNLEALIVQLGPRECLIPSGDIGPDGAKLKQVLSRSPLLVSERKRTEFNNKDAGQDLGR
LLRKKGGEAASVSARPEMDRTYAISALAAVIKYLELLGDESNFGQFSLSMYDLTQYMRLD
SAAIRALHVEPTGGTGETSGNITKTHTLLGLLDKCRTPPGHRLLLQWLRQPLVDINKIQE
RQDLVEAVVSSVELRHSLGEEHLRRIPDLNRLARKLARKAATLQDCYRFYQCVERLPNLC
EAIAKYDGPHVASLAAVFTTPLQELISDLSKFQEMIETTVDMEQANQGEYVIKPDFDDTL
GELRETMNNLEADIQSQLRRAANDLGLDAGKSIKLESNTQLGYFFRVTLKEEKVLRNNRN
YRMIDTNKAGVRFRNGALQDLNEQHMASREEYNTQQKTVVDEIMNIAAGYVEVIQNLGQV
LASLDCICALAFAAVSAPIPYVRPKLLPRGSGVLKLENARHPCLELQDDVSFIPNDCNFG
KDDGMFHIITGPNMGGKSTYLRSVGAAVLMAQVGSFVACEQAEISVVDSILARVGAGDCQ
LKGVSTFMAEMLETATILQSASSESLIIIDELGRGTSTYDGFGLAWAISEYIAKEIGSFC
LFATHFHELTALADEVDSVKNFHVMATTAHGALTLLYQVRPGPCDRSFGIHVAELANFPP
SVIEYAKRKAGELEDEFGDDDDSEGAVKKRKLEKQEGEKLVEEFLAKAAALDVDNLTDAE
LQAEIKKLRDEVQATNNAYISHLLSRET
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcttcagcccaaggaacagctcacgctcgatggtgcgagtgaacaagggttc
ctgtccttctatcgcgggctacccgagaaaccaaacaccaccgtaagagtatttgaccgt
ggagactactatactgtgcatggccaggatgccttgctcgcagcaagagaacttttccgc
actaattctgttgtgaaatatttaggatcagggaataacaaactggaatcagtggtactg
agccgtctgaactttgagtcacttgtgcgggatctcttgctggtgaaacactatagagtg
gaagtgtataaaacaaaatcttctgggaaaaatgactgggaggctgagcacaaggcatct
ccaggcaacttgtctcagtttgaagaggttctttttggtgctaacaacgagcttacggtt
acaacaggtgttatggcagtcaagttgggcacagaaaatgggcaaaggatggttggagtt
gggtatgtggatgtgaatggtcgcctgatgtctgtgtcagagttcagtgacaatgacaca
tttagtaacctggaagcattgatagtacaattgggacctcgggaatgtcttatcccctct
ggtgatattggccctgatggtgccaagctcaagcaggtgttgtctcgaagtccactgctt
gtatctgaaaggaagaggactgaatttaacaataaggatgccggccaagacctaggccgt
ttgttacgtaaaaagggtggagaagcggcctctgtttctgcacgaccagaaatggatcgt
acatatgccatttcagccttggcagcagtaataaagtacttggagctcctgggtgatgag
tctaactttggacagttttcattgtccatgtatgacctgacccagtacatgcgacttgat
agtgcagcaatacgagcattgcatgttgagcccactggaggaactggggaaacatctggt
aatataaccaaaacgcatacccttcttggtcttctagacaagtgtcgaactcctcctggt
catcgtttactattacagtggctcagacaacccttagtggatatcaacaagattcaagaa
cgacaagacttagtagaagctgttgtatcatcagtggagctgcggcatagtcttggagaa
gagcaccttcgtcgtattccagacttgaatcgcttggcacgtaaactggcacgcaaggca
gcgacacttcaagattgttacagattttatcagtgtgttgagcgtctgccaaatttgtgt
gaagcaattgcaaaatatgatggccctcatgtagcatctcttgctgctgtcttcacaact
cctctccaggagttgatatcggatctgtcaaagtttcaagaaatgattgaaaccactgtt
gacatggaacaggcaaatcaaggggagtatgtcatcaagccagattttgatgatacccta
ggagagctacgagaaacgatgaataatttggaagcagacattcaaagtcagctgaggagg
gctgcaaatgatcttggtctcgatgctggaaagagcattaaattggagtccaatacacag
cttggttacttctttagagtcacactcaaggaggaaaaggtccttcgaaacaacaggaac
taccggatgattgacactaacaaagctggtgtgcggttcagaaatggtgccctgcaagac
ctcaatgagcagcatatggcatcacgggaggagtataatacacagcaaaaaacggttgta
gatgaaataatgaatattgcagctggttatgttgaagtaatacagaatctaggtcaagta
ctagcttctttagattgtatctgtgccttggcctttgctgctgtttctgcccctattccc
tatgttcgacccaagcttctgccaaggggatctggtgtgttaaaactggagaatgctcgt
catccttgtttggaactccaggatgatgtttcttttataccaaatgactgcaattttggt
aaagatgatggaatgttccatatcataactggacccaacatgggaggaaaaagcacatat
ttgagatctgttggtgcagcagtgttgatggcccaggttgggtcttttgtggcttgcgaa
caggctgaaatatctgttgtggacagcatcttagctcgtgtgggtgctggagattgtcag
ctaaaaggagtgtcaacttttatggcagaaatgttggagactgctaccattcttcagtct
gcaagcagtgaatcgctgatcataattgatgagcttggtcgtggaacttcgacgtatgat
ggttttggattggcttgggctatatcagaatatatagctaaggagattggatcattttgc
ctatttgccactcattttcatgagctgacagcattggcagatgaggtagacagtgtgaaa
aacttccatgtgatggctactactgctcatggtgctcttactctcttatatcaggtgcgt
ccaggaccctgtgaccgcagctttggtatccatgtagcagagctggctaactttccacca
agtgtaatagagtatgccaagaggaaggctggagagctggaggatgaatttggagatgat
gatgactctgaaggagctgttaagaaaagaaagctggagaaacaggaaggtgaaaagtta
gtggaggaattccttgccaaggctgcagctcttgatgtggataacttgacagatgctgag
ctgcaggcagagataaaaaagctgcgagatgaagtgcaagctaccaataatgcatacatt
tcacatcttttatccagagagacttaa
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