Panulirus ornatus (ornate spiny lobster): 139754230
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Entry
139754230 CDS
T10834
Name
(RefSeq) LOW QUALITY PROTEIN: squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
porn03041
]
139754230
03036 Chromosome and associated proteins [BR:
porn03036
]
139754230
Spliceosome [BR:
porn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
139754230
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
139754230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Suf
HAT_PRP39_C
Lsm_interact
RRM_7
Smg4_UPF3
TPR_14
NRDE-2
RRM_occluded
Phage_Mu_F
RRM_3
Motif
Other DBs
NCBI-GeneID:
139754230
NCBI-ProteinID:
XP_071527639
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All DBs
Position
16:33372438..33390978
Genome browser
AA seq
1054 aa
AA seq
DB search
MTDPEEDISNNSKGQEELMEGIEEGTDSDSDDESLDDRHEEELRIKVKEFRKQLEGNELY
YDGHVNLIAALRELFELEEARKARQAMSKIYPLTPELWLEWIRDEQKVCTTNDERQFIVE
LFECAVKDYSSVQLWVEYVMFMLGSGDMVATRAVGELGLTSVGTHVAEGVLVWQVVLLVE
KQIYAALQKPGATHSEQEIKEQEKQLCRIQGLFRRQMRVPLMNCDADSLLQEASQYFEGD
IEPQMKEDLKKTQRKLNEKTPFEEELLRAENDVDKLASYRRYIIHTKETDNPAAVQSLYE
RAVTDHCLDAGLWEEYVRFVMQQFHGLDYVVLPVCERSQRNCPWSATLCELHITALQIFA
TQDESVATKIKGALEKGLGCGVQSGSEVTRMWMAYLIFLRRQIIWEQPHDTQLHALREAG
NQAISMIDKYFGDEGDIDSDIPRFLARIEAEYAHDQEKAREIWNDIVMKRNNNFKNGNFW
LEFINMERSYGSEKYCRKLYRRALERVWDWVEVIGSSYLRFEQEAGTLESMQDFIKRYDD
RLAIVSKKRAEDAAKLEAEKQAENEMHQRRKHKGKPNKWEWNKSLKDKSTVSHSEESGVF
KVPLPVTRTDKASKHHMAVNASSKSSNTPGTKNSTFLEPKSVTTPPGYTDDVMPPPGFKV
NPRPYPDSFKRNAPLSGVKDTITPPPGFKDDEPNLLDKGSVTPPPGYRGALPGGFKDNVA
PSPSQEEKIEPPPGFKPESPPSAGATVREAKVSEGEPPAKKLRIEEQYGVLTEKDPKDEL
CTVFLSNLDYSTGNDEIIPVFSGCGEIASFRLVKDYKFRSKGFGYLVFKTRDAAVKSLKL
DRTLINGRPVFVSPYDPEGHAHKFTYSLNQEKEKLFVRGLPFSMTENDVREAFQQHGKIK
NIRLVTYRNGHSKGNCYIDYYDSETAQKVRQAMDGANLGDKVISVFISDPSAKKSSTRAS
SPREGSSFDGNDDPDAKEKLSNKDTSTPKGGILGGGIKGKKVAGIRGKGMFSLMPRAVVR
AHATSSTGITETSSVESQGKKMSNEDFRSMLLKK
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcctgaggaggatatcagtaataatagcaaaggacaagaagaactaatggag
ggtattgaagaaggtacggactcagactctgatgacgaaagcttggacgatcggcatgaa
gaagaactcaggattaaagtgaaagaattcagaaagcagttagaaggcaatgaactgtac
tacgatggacatgtaaatctgatagcagcattacgggagctctttgaattagaagaagca
agaaaggccagacaggcgatgagtaaaatataccctttgacaccagagttatggttggaa
tggattagagatgaacagaaagtctgcacaactaatgacgagaggcagttcatcgttgag
ctgtttgaatgtgctgtgaaagattacagcagtgtacagctgtgggtagaatatgtcatg
ttcatgttgggtagtggtgacatggtggctacaagagcagttggagaactcggtctcact
tctgtgggtactcatgttgcagaaggtgtattggtatggcaagtggtacttctggttgag
aaacagatatatgcagcattacaaaagccaggtgcaactcactcagaacaagaaataaaa
gaacaggaaaaacaactgtgtcgaatccaaggactctttcgtagacagatgagggtacct
ctaatgaactgtgacgcagattctctcctccaagaagcttcacaatattttgagggtgat
attgaacctcagatgaaggaagacctgaaaaagacccagagaaagcttaatgagaaaact
ccatttgaagaggaattgcttagagcagaaaacgatgttgacaaattggcttcatatcga
cgttacatcattcatacgaaagaaactgacaatcctgctgcagtgcagagtttgtatgag
agagctgttactgatcactgtcttgatgctggtttgtgggaagaatatgttcgctttgtt
atgcaacagtttcatgggttagattatgttgttttaccggtttgtgaacgcagtcagaga
aactgtccttggtcagcaaccctttgtgaacttcatatcacagctcttcagatatttgca
acccaagatgagtccgttgcaacaaaaataaaaggtgcactggagaaaggtcttgggtgt
ggtgttcagtctggaagtgaagtcactcgaatgtggatggcctacctgatatttctacgg
agacagatcatttgggagcagccccatgatacccagcttcatgccctaagagaagcagga
aatcaggcaataagcatgattgataagtattttggtgatgagggtgacattgatagtgat
atacctcgttttttggctcgaattgaagctgaatatgcccatgaccaggaaaaagcaaga
gaaatctggaatgatattgtaatgaaaagaaacaataactttaagaatgggaacttttgg
cttgaatttatcaacatggagaggagttatggttcagaaaagtactgtcgaaaactttac
cgccgtgctttagaacgagtctgggattgggtggaagtgataggttcttcttaccttcgg
tttgagcaagaagctggaacattggaatcaatgcaagacttcatcaagagatatgatgac
aggttagccatagtatcaaagaagagagcagaagatgctgctaaattagaagcagagaag
caagctgagaatgaaatgcatcaaagaagaaagcataaagggaagccaaataaatgggaa
tggaataaatcactaaaagacaaaagtacagttagtcattcagaggaaagtggggtattt
aaggttcctcttccagtcaccagaacagacaaagcatcaaagcatcatatggcagtaaat
gcaagttcaaaatccagtaatactccaggcactaagaatagtacattccttgagcctaag
agtgtgacaactcctccaggatacacagatgatgtaatgcctcctccaggatttaaagtt
aatcctcgaccttatccagactcttttaagagaaatgcaccactttcaggtgtcaaggat
acaatcacgcctccaccaggctttaaagacgatgagcctaatttattagacaagggaagt
gtcacacctcctccaggctataggggtgctttacctggtggcttcaaggataatgttgca
ccatctccaagccaagaagaaaaaattgaacctcctccaggattcaaacctgaatcacct
ccttcagcaggtgccactgtgagagaagcaaaagtatctgaaggtgaacctccagccaaa
aaactgagaatcgaagaacaatatggcgttctcactgagaaagatccaaaagatgaattg
tgtacagtcttcctcagtaatttggactacagtactggaaatgatgaaataattccagta
tttagtggctgtggtgaaattgcaagttttcggctggtgaaggactacaaatttcggagc
aaaggttttggctacttagtcttcaaaacacgtgatgctgctgtgaagagtttaaaactt
gatcgaactcttataaatggacgacccgtctttgtgtcaccatatgatcctgagggccat
gcccataaattcacatattcattaaatcaggaaaaggagaagttatttgtaagaggcttg
ccattttcaatgacagaaaatgatgtaagagaagcctttcagcaacatggaaaaatcaag
aacatacgtcttgtcacataccgaaatggtcattctaagggcaactgttacatagattat
tatgattctgagacagcacaaaaagtaagacaagctatggatggtgctaaccttggagat
aaagtgatctcagtgttcattagtgacccttcagccaagaaatcatccactagagcatca
tctccaagagaaggcagctcttttgatggcaatgatgacccagatgcaaaagaaaagtta
tctaacaaagacacatcaacaccaaagggaggcattttgggtggtggcattaaagggaag
aaagttgctggcatccgtggcaaaggaatgtttagcttgatgcccagagctgttgtgcgt
gcacatgcgacttcatctacaggtatcactgagacttccagtgttgaatcacaaggtaag
aaaatgagtaatgaggactttcgaagcatgcttctgaaaaaatga
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