Panulirus ornatus (ornate spiny lobster): 139754248
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Entry
139754248 CDS
T10834
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03440
Homologous recombination
porn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139754248
03450 Non-homologous end-joining
139754248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porn03032
]
139754248
03400 DNA repair and recombination proteins [BR:
porn03400
]
139754248
DNA replication proteins [BR:
porn03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
139754248
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
139754248
BRCA1-C complex
139754248
NHEJ (non-homologous end-joining)
MRX complex
139754248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
GAS
SMC_N
SbcC_Walker_B
AAA_15
Flu_M1
AAA_29
ABC_tran
Cortex-I_coil
AAA_16
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
139754248
NCBI-ProteinID:
XP_071527679
LinkDB
All DBs
Position
16:35240052..35294756
Genome browser
AA seq
1309 aa
AA seq
DB search
MSRIEKLSIQGIRSFGPEEKRRIEFCSPLTLILGQNGCGKTTIIEALKYIATGDMPPGCG
RGGSFVHDPKLAKEATVRGQIKLLFRDIRGQELVTTRSIEATQKAKRPECRTLDATLQKL
DSDGSKITLSSKCSDFEALMVSSLGVSKPILNNVIFCHQEDSNWPLDEGKKVKEKFDAIF
NATKYTKCLETIRKLRLEMKAKVKNMQDILVELKKWKDEANRKRSDLRSSEGQQTDIKNE
KQKLKAEMEPILQRLKEICNIEDDIGQIRGELSGKKHELDSLRKTQEELRATLTEHLSCS
DEELFHMIEDFQRDLALKEAEQKRVESQMYEAERGVQQKQGEVSKAVRQQGELEAAHNRH
KNEIQKRSAMLNGIVEEYTFQEFMGVDDFKDEQAESALLKLLNVVEEERKATLKKKEEFE
EQETKIQADVDSLRSREAALDHEIKSKGKQLEDITRKIRQIKQTLMRNESDLSVANLDEI
KEELKQVEQTVTAEEEKFDVKKVLEDIDVGKKTRREIELSVDEIKRVVAKMNRQAEARSQ
YDIHVKDRKELENKVEYLKRKHADELEHLLGEIPDDNVKHRVDACTTRLMSHISDLRHNI
DALNTRKAQLDTSIRGHKQQMEKKEKDIKDLERKIDSTCLGIDLDKALDKSKRSKEDLTR
ERGDLSSSITVLNRFTEKLRQRDCCPLCHRDFSTKDEVNQLIEELETKVSSVPGKLKLVK
EKLDEQEKIYDQMVQLKPQREQANQARVELDRIQNQMDSETKELEKVNADLEGKTEMLEI
TQADEETARLIQGDVITIDNHLKKIKQLKDHIDDLQSTLGSSDIGMSMDEAIVRQNELED
DLRKSQNKVEELQEQLQEHKDRLQGLKDRKLRLSQQELNLKTKLQETEKLKEEIVKLEQD
RSHLEEERDQAQAEVAPYKFQIIDETSKKTKITQEKESWIEAQNTKVNVIREKHKSLNDL
HKSIVTYVSDGEENRLRQSRERVTSLQENVASLETHKKSLEEKNRSLQKEITNHRERKRS
LEDEKKIRDKEVEAKQLMQSIAKYEERIRGFRYESLIEEKDELHQKYSRMQNNRATLDGR
LEEVQKTIQLLEGEIRRKEIQDADKNYKEKFVQMKCTDVAADDLNKYYKALDTAVMRDHA
HKMGTINSIVRELWRTTYKGNDIDYVEVKTDETESQGTDKRRTYNYRVVMVKNQVEMDMR
GRCSAGQKVLACLIIRMALGETFSSNCGILALDEPTTNLDRKNIDALSSALLSIVKKRSH
QRNFQLIIITHDADFLGKMTHTDDLDHYFKLSRNEKGLSTITRCDKDSL
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaatagagaaattgtccatccaaggtatacggagctttggacctgaagaaaaa
cgtcgaattgaattttgctctccacttactctcattcttggtcagaatggttgtggaaag
acaaccataattgaagcacttaaatacatagcaacgggggacatgcctccaggatgtggt
cgaggaggttcctttgtgcatgacccaaagttagcaaaggaagctactgtacgtggacaa
atcaagctgctttttcgtgatattcgaggacaagaattagtaacaactcgatctatagaa
gccacacagaaggcaaagagaccggaatgcaggaccttagatgctactctccaaaagctt
gattcagatggaagtaaaattactttatcaagtaaatgctcagactttgaggcactgatg
gtttcatcactgggtgtctctaaacctatcttgaataatgtcatattctgccaccaagaa
gattcaaattggcctctggacgaggggaaaaaggtgaaagaaaagtttgatgccatattc
aatgctacgaagtacactaaatgtttagaaaccatacggaaactacgcttagaaatgaaa
gccaaggtaaaaaatatgcaagatatcttggtagagctaaagaagtggaaagatgaagca
aatcgtaaacgatctgacttgagaagttctgaagggcagcagacggatatcaaaaatgag
aaacaaaaattgaaagcagaaatggaaccaattttgcagcgcttgaaagaaatatgtaat
atagaagatgatataggacagataagaggagagcttagtggtaaaaaacatgagctagat
tcactgagaaaaactcaggaagagttgagagcaacactgacagaacatttatcatgttca
gatgaggagcttttccatatgattgaagatttccagagagaccttgcacttaaagaagca
gaacaaaagagggtggaatctcagatgtatgaagcagagaggggggtgcagcaaaagcag
ggagaggtttcaaaagctgtaaggcaacagggggagttagaagctgctcataatagacac
aagaatgagatacaaaaaagaagtgccatgttgaatggaatagttgaagaatatacattc
caagaatttatgggagtagatgattttaaggatgagcaagctgaatcagcgttactcaag
ctgttaaatgtagttgaggaggaacgtaaagctactttgaaaaagaaggaagagtttgaa
gaacaagaaactaagattcaggcagatgttgatagtctccggtctcgagaagctgctttg
gaccatgaaattaaaagcaaggggaaacagttagaggacataacaaggaagattagacaa
atcaagcagaccctcatgcgtaatgagagtgacctttcagttgctaatctagatgagatt
aaagaagagcttaaacaagttgagcaaactgtcactgcagaagaagaaaaatttgatgta
aaaaaggtgctggaggatattgacgttggcaagaaaacaagacgtgaaatagagctcagt
gtagatgaaatcaaacgtgttgtggcaaagatgaatcgtcaagctgaagctcgctcccag
tatgacatacatgtaaaggacagaaaagaactggaaaataaagttgaatacttgaagcgt
aaacatgcagatgaactggagcacctccttggagagattcctgatgacaatgtaaaacat
agagttgatgcttgtacaactcgtttgatgagccacatatcagatcttcgccacaacatt
gatgctctgaacactagaaaagcacagcttgataccagcatcaggggacataagcagcag
atggagaaaaaagagaaagatatcaaagatttggagaggaaaattgacagcacatgcctt
ggaatagatctggataaagccttggacaaatcaaaaagatctaaggaagatttaactcgt
gaacgaggggacttgtcaagctccattacagttttgaaccgttttacagagaaattaagg
caacgagactgctgtcccttatgtcacagagacttttcaaccaaagatgaagttaatcag
ctgatagaagagttggagactaaggtaagcagtgttccaggaaaattaaaacttgtgaag
gagaaacttgatgagcaggaaaaaatctatgaccagatggtacaacttaagccccaacgt
gagcaagccaatcaagcgcgtgttgagcttgatagaattcaaaaccaaatggacagtgaa
actaaggaattggagaaggttaatgcagatttagaaggaaagactgagatgctggagatt
actcaagctgatgaggagactgcaagattgattcagggtgatgtcattaccatagacaat
cacttgaagaaaatcaagcaactcaaggaccatatcgatgaccttcaatcaactttagga
agctcagatattggaatgagcatggacgaggcaatagttcggcaaaatgagttggaagat
gacttgcgaaagtctcagaacaaagtagaagaacttcaagagcagttgcaagaacataag
gatcgactccaaggccttaaagatagaaagttaaggctttctcaacaagaattaaatctg
aaaacaaaacttcaggaaacagaaaaattaaaggaggagattgtaaaattagaacaagat
cgcagtcatcttgaagaagagcgtgatcaagcacaggcagaggtagcaccatacaagttt
cagattatagatgaaaccagtaagaaaaccaaaattactcaagaaaaggagtcatggata
gaagctcaaaacactaaggtgaatgtgattcgtgaaaaacataaatccctgaatgatcta
cacaagagcatagttacctatgtgtcagatggtgaggaaaaccgtttaaggcagagtcgt
gagagagtcacatctctgcaggaaaatgttgcttcattagagacacacaagaagtctctt
gaagaaaagaaccgcagcctgcagaaagaaataacaaatcacagagaaagaaaacgtagt
cttgaggatgagaagaagatacgtgacaaagaagttgaagcgaaacagttaatgcaaagc
attgcaaaatatgaggaacgtattcggggcttcaggtatgaatccctcattgaagaaaag
gatgaactgcatcaaaagtatagtaggatgcagaacaatagagcaacactagatggaaga
ctggaggaagttcagaaaacaattcaacttcttgagggtgaaattagaagaaaagagatt
caagatgcagataagaattacaaagaaaaatttgttcagatgaagtgcacagatgtagca
gcagatgatctcaacaaatactacaaagccttagacactgcagtcatgcgcgaccatgcg
cataagatgggcaccatcaacagcatagtcagggaactatggcgtaccacctacaaaggc
aatgatattgattatgttgaggttaaaacagatgaaacagaatctcaaggtacagacaaa
agacgaacatacaactatcgagttgttatggtgaagaatcaagtggaaatggacatgaga
gggaggtgttctgctggtcagaaggttttagcttgtcttattatcagaatggcccttggt
gagacctttagttccaactgtggcattcttgcactagatgagccaactactaacctggat
cgtaaaaacattgatgccctgtcatcagcattactgagcattgtaaagaagaggtcacat
caacgaaacttccagttgattatcatcacacatgatgctgatttcttaggaaagatgacc
catactgatgatctagatcattacttcaagctgtctaggaatgagaagggtttgtccaca
ataactcgatgtgacaaggactctctttga
DBGET
integrated database retrieval system
