Panulirus ornatus (ornate spiny lobster): 139754580
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Entry
139754580 CDS
T10834
Symbol
Herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139754580 (Herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
porn04121
]
139754580 (Herc4)
Enzymes [BR:
porn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139754580 (Herc4)
Ubiquitin system [BR:
porn04121
]
Ubiquitin ligases (E3)
HECT type E3
139754580 (Herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
139754580
NCBI-ProteinID:
XP_071528072
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All DBs
Position
17:16634674..16798095
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AA seq
1047 aa
AA seq
DB search
MYCWGSTVNGELGVGAPEVEQLTLPTFMDFSKSWNVKEVAAGLMHSLILTEEGLVYSCGN
NDVGQLGHNKITRRPEQIDDLENYNIVQVAAGDQHSVALTSWGLIYSWGENGYGQLGINS
TEMHTPTPKLVKSLARKQVLQIACGSNHTLALTSDGELYSWGQNNFGQLGLGHKGGPQKE
PSHVKSLIGTPLVHITAGGHHSAILTQAGFLLMWGSNKYGQLGLSLTNGEKCCTTPTLVP
NLESYSEPVLYVVLGEGHTAVLDSQGKLWTFGYGRYGQLGHGTYDDGSIPRTVLDLCGTR
ISQVACGRCHTIVFIPSQGQLYAFGQGMSGQLGIKTPHNRNLPQVVVGPWVSPRGVCLLD
HSEEEDSSKVYVKKIFAGGDASMATVMKEVGVADDYCQKHPLQVPLRIEEAKINQMISID
EDDMIDDDLFMYMETVFGSLACWNCSFLKEGCNKHSHGLDYRLAEEYIAKLGRIPRESIQ
EVIQASMQSIVQQLPSHPRTLEGLRCYILLPLFKDFLDARHMCKLQMPYAEAVLKMQKDF
AVNFKAWMKNLPRDFVMRLLTIYKAVVVQILNNAKQSSSEMDRRVLTSSLKMLALIHGEN
FKDGMKAARLSYEDFYIPAIAEKIDIRSDYLNWINSKIRPHMRRDNPISFCEYPFLFDAQ
AKTLLLRSDATRQMQGAIQEAVVNSNPMLWLFDPGQVQFLNIHIHRSSIVEDTINQLLHH
GVTDYKRPLKVHFIGEEAEDAGGVRKEFFLLLLREILNPDYGMFTQYCHTNAIWFKEGSL
EVAATYCLIGIVCGLAIYNFTIINLPFPLALYKKLLGESVSLDDLSDLDPHLTRSLRELL
EYEGNDVEDIYCLNFTVTQDYFGEAKCIPLKDDGENIPVTSENKQEYVDLLVDYKLNKSI
DSQYKAFHDGFYRVCGGIVLKLFQPMELMALVTGNENYNWVELEKNTEYKGEYYPDHPVI
KMFWEVFHDMKVDQKKQFLLFLTGTDRVPILGMKALKMIIQSTADDSYLPVAHTCIAQLD
LPKYGTKEKLRYKVLQAIQQSEGFGLV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtactgttggggatcaacagttaatggggagctgggagtaggggctccagaagtagag
caactaaccttacctacctttatggacttttcaaaatcatggaatgtcaaggaagttgct
gctggtctgatgcactctctgatcttgacagaagaaggtcttgtatattcttgtggcaac
aatgatgtgggacagctgggacataacaagataacaaggagaccagaacaaattgatgat
ctagagaactacaatatagtgcaagttgcagctggggaccaacattctgtggcccttact
tcatggggtttgatttattcctggggagagaatggatatggtcagctgggtattaattca
acagaaatgcatactcctactccaaaattagtgaagagtttggcacgcaaacaagttctg
cagattgcatgcggatctaaccacacacttgctctgacttctgatggagaactttactcc
tggggtcagaataactttggtcagcttggcttaggtcataaaggaggacctcagaaagag
ccatcccatgtcaagtccttaattggaaccccattagttcacatcactgcaggaggacat
cactcagctattttgactcaggctggattccttctgatgtggggctctaacaaatatggt
caacttggtctttctcttacaaatggtgaaaaatgctgtacaacacccacactggtcccc
aatttagagtcttattctgaaccagtactgtatgttgtccttggagaaggtcacactgct
gttctcgactctcaagggaagctttggacatttggatatggtcgttatggacaactaggc
catggaacatatgatgatggaagtatacctcgaactgtacttgatttgtgtggtacaaga
attagtcaagttgcatgtggaagatgtcacacaattgttttcattccttcacagggtcag
ctttatgcatttggtcaaggcatgtcaggtcaattagggatcaagactccacacaatcgc
aatttacctcaggtggtagttggaccatgggtttccccacgaggagtctgcctcttggat
cacagtgaggaagaagacagctccaaagtgtatgttaagaagatttttgctggtggagat
gcaagtatggctaccgtaatgaaggaagttggtgttgctgatgattattgtcaaaagcat
ccattgcaagtcccattgagaatagaagaagcaaagatcaaccaaatgattagtattgat
gaggacgatatgatagatgatgatttatttatgtatatggaaactgtttttggatccttg
gcttgctggaactgttcattcctaaaggagggctgtaacaagcatagtcatgggctggat
tacaggctggcagaagagtacattgcaaagcttggtcgaatacctcgagaatccatacag
gaagtaatacaagctagcatgcagagtattgtacagcaactaccgagtcatcccagaact
ctggagggtctccgatgttacattcttcttccactttttaaggacttcttagatgcgcga
cacatgtgcaagttgcaaatgccgtatgcagaggctgtcctgaagatgcagaaagacttt
gctgtaaacttcaaggcttggatgaaaaatttaccaagggattttgtcatgcgtctcctg
actatttacaaggctgtggttgttcagatactcaacaatgccaaacagtcgtcatctgag
atggatagacgagtgctgacttcatccttaaagatgcttgctctcatccatggagaaaac
tttaaggatggaatgaaggcagctagactgtcctatgaggatttttatatccctgcaatt
gctgaaaagatcgacattcgcagtgattatctgaactggatcaacagcaaaattagacca
catatgagaagagataatccaatctccttctgtgaatacccttttctctttgatgctcaa
gcaaagactctgctgctccgttcagatgccacaagacagatgcaaggtgcaattcaagaa
gcagttgtcaacagtaatccaatgttgtggttgtttgaccctgggcaagtacagttcttg
aatattcatattcatcgcagtagcattgttgaagataccatcaaccagttgcttcatcat
ggagtcacagactacaaaagacctctcaaggtgcactttattggtgaagaagcagaagat
gccgggggggttcgcaaagagtttttccttctcctattacgagaaatacttaacccagac
tatggcatgtttacacagtattgtcatacaaatgccatttggttcaaggagggatctcta
gaagtagcagcaacatattgtctgattggcattgtgtgtggtcttgcaatttacaacttc
actatcatcaatcttccatttcctctggcactctacaagaagttactgggtgaatcagtt
agtcttgatgatctgtcagacttggatccacatctcacgagatccctccgtgagctcctg
gagtatgaaggcaatgatgtagaagatatatactgtttaaacttcactgtcacacaggat
tactttggtgaagccaagtgtattcctctcaaagatgatggagagaacattccagtcacc
tcagaaaacaaacaggagtatgttgatctgcttgttgactacaagttaaacaagagtata
gacagccagtataaggcattccacgatggattttaccgtgtttgtggaggaattgttctc
aagctcttccagcccatggaactaatggctcttgtcacaggaaatgagaattataactgg
gtagaactggagaagaatacagaatacaagggtgaatactacccagatcatcctgttatt
aaaatgttttgggaagtgttccacgatatgaaagttgatcagaaaaagcagttccttctc
ttcctaactggcactgatcgcgtaccaattttaggcatgaaggccttgaagatgataata
caatccacagcagatgattcgtaccttccagttgctcacacatgcattgctcagctggac
ttacctaaatatggcacaaaggagaagcttcgctataaggttttgcaggccattcagcag
agtgaaggttttggccttgtttag
DBGET
integrated database retrieval system
