Panulirus ornatus (ornate spiny lobster): 139755300
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Entry
139755300 CDS
T10834
Symbol
Ssl1
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03022
Basal transcription factors
porn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139755300 (Ssl1)
09124 Replication and repair
03420 Nucleotide excision repair
139755300 (Ssl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porn03021
]
139755300 (Ssl1)
03400 DNA repair and recombination proteins [BR:
porn03400
]
139755300 (Ssl1)
Transcription machinery [BR:
porn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
139755300 (Ssl1)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
139755300 (Ssl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
IBR
PSD13_N
FYVE
Motif
Other DBs
NCBI-GeneID:
139755300
NCBI-ProteinID:
XP_071529517
LinkDB
All DBs
Position
19:complement(227380..308617)
Genome browser
AA seq
394 aa
AA seq
DB search
MLEEDDPKEYRWESGYEKTWEVIQEDESGRLEPSVTEMIQRAKRRRLLDREASVRLGIMR
HVYVILDLSQAMLEQDLKPTRQICTLKILEDFIREFHDQNPISQLGLITTQNKVAKRYSE
LSNNPQRHLDFVKKLQEVPCRGEPSLQNSLEVALSSLRHLPPHTSREILIIFAALTSCDP
GEIGATIQKVKDANIRVSVVGLAAELYVCKDISKDTGGSFSVCINDVHLKELIREHLEPP
AASVKMDHTLIKVGFPHQVNADAKPALCMCHLDDLPPLNTRGYYCPQCTAKYCDLPAECR
VCGLMLVTAPHLARSYRHLFPLKHFDEIPVEESTAELCYGCQKLFTTAAADKNVYVCRTC
RQVFCFNCDIFLHETVHSCPGCASNPTISQYNNS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggaggacgatcccaaagagtatcgctgggagagtggatatgagaaaacatgg
gaagttatacaagaagatgaatctggtcggctggagccatcagtgacggagatgatccag
cgagcaaagcgacggagactactggatcgtgaagccagtgtgaggctaggaattatgcgt
catgtgtatgttatcctggatctgtctcaagccatgttggaacaagatttaaaaccaaca
cggcaaatctgcacattgaagattcttgaggacttcatcagagagtttcatgatcagaac
cccattagtcagctagggctgattaccacgcagaacaaggtagccaagaggtacagtgaa
ctcagcaataatcctcagaggcatctggattttgtcaagaagttacaagaagttccatgt
agaggtgaaccttcactgcagaattcactggaggtagcactgtcatctttgcgtcacctc
ccaccacatacatcacgagaaattctcattatctttgcagctcttacatcctgtgatcca
ggggaaattggagctactatacagaaagtgaaggatgcgaatattcgtgtgtcggtggtt
ggtcttgctgcagagttgtatgtttgcaaggacatcagcaaagacacagggggttccttc
tctgtctgtattaatgatgtccacctaaaggaattgattcgtgaacatttggagccccca
gctgcatcagtaaaaatggatcacacacttattaaagttggctttcctcatcaggttaat
gcagatgctaaacctgctttgtgcatgtgccacttggatgatctacctcctcttaacaca
cgtggctattattgcccccagtgtacagccaaatactgtgaccttccagctgagtgccgt
gtgtgtggcctcatgttggtaacagctccacaccttgcacgctcatataggcatctcttc
cccctgaaacactttgatgagataccagttgaggagagtacagctgagctttgttatggt
tgccagaaacttttcactacagctgctgctgataagaatgtatatgtgtgtaggacatgc
agacaagttttttgcttcaattgtgatatcttcctccatgaaacagttcactcctgtcca
ggatgtgcatcaaatcccacaatatctcagtataacaacagctga
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