Panulirus ornatus (ornate spiny lobster): 139755393
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Entry
139755393 CDS
T10834
Symbol
park
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn04120
Ubiquitin mediated proteolysis
porn04137
Mitophagy - animal
porn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139755393 (park)
04120 Ubiquitin mediated proteolysis
139755393 (park)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139755393 (park)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
porn04131
]
139755393 (park)
04121 Ubiquitin system [BR:
porn04121
]
139755393 (park)
03029 Mitochondrial biogenesis [BR:
porn03029
]
139755393 (park)
Enzymes [BR:
porn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
139755393 (park)
Membrane trafficking [BR:
porn04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
139755393 (park)
Aggrephagy
Other aggrephagy associated proteins
139755393 (park)
Xenophagy
Other xenophagy associated proteins
139755393 (park)
Ubiquitin system [BR:
porn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
139755393 (park)
Mitochondrial biogenesis [BR:
porn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
139755393 (park)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
ubiquitin
IBR_1
IBR
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
139755393
NCBI-ProteinID:
XP_071529747
LinkDB
All DBs
Position
19:complement(11593874..11621779)
Genome browser
AA seq
556 aa
AA seq
DB search
MLGFLFNRLIELWHSILAMFGFGRSHRALSNQLEVFVRTNTGEKVSVCLDPSWTVGQIKT
TLAPKLSSLSQDLRIIFAGKELPDDMVIHQCDLGNHSFLHAVKVEAKDKDGKTSSNVESS
VGAKLDYLNEVSNSARTFETDKKALEPVKELVVQNKPHHTESSENPGTHLTKTEDDAASG
SPSSPAQAMTSLSTTGRGCSGKLLCDASTVITIQMTEAEQKAIHDLKTSDGIGERPHFYV
YCVRPCNSVQVGKLRVRCSSCRQGALTLHRDPCNWQDVLNPGQISATCETIGCSGSVAEF
FFKCRGHETSGEDDTSVPLYLVRANLPAVPCLACTDVSSPVVVFECADAHVMCLDCFVTF
CVSRLNERQFVQDAHLGYTLSCPIGCADSLIREVHHFKLMGDNHYERYQRFGTEEAVLAA
GGVLCPYPGCGQGIIPDQDCRRVVCTGGCGYVFCRLCLQGYHIGECHPEDGNGANIVEGS
GGFAVDLSRASGSRWDEATSVAIRVTTKPCPKCRTPTERDGGCMHMVCTRGPCGFHWCWV
CQTEWTRECMAAHWFG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcttggattcctcttcaatcgtcttattgagctttggcactccatattagcaatgttt
ggctttggcagatcccaccgagcattatcaaaccaacttgaagtctttgtcaggacgaat
actggggaaaaggtcagtgtgtgcctcgacccatcatggacagttggtcaaatcaaaacc
actttagcaccaaaactcagcagtctcagccaagacttacgaataatctttgctgggaaa
gaactaccagatgatatggtaattcatcagtgtgatcttggaaatcacagcttccttcat
gcagtgaaagtggaagcaaaggataaagatggaaaaacatcttccaatgtagaatcaagt
gttggtgctaaactggattatctgaatgaagtttcaaattctgctagaacttttgaaaca
gataaaaaggctttggagccagttaaagaattagtagtacaaaataaacctcatcataca
gaaagttctgaaaatccagggacgcatcttaccaaaactgaagatgatgcagcctctggt
tcaccttcttcacctgctcaagcaatgacttctctttcaacaacaggcagaggctgcagc
gggaagcttctatgtgatgcatccacagttataactatacagatgactgaggcagaacag
aaggccattcatgacctaaagacttctgatggaataggtgagcgtcctcatttttatgtg
tactgtgtgaggccatgtaattcagtccaggtgggaaaactacgtgtgagatgttcatcc
tgtagacaaggtgcccttacacttcatcgggatccttgcaactggcaagacgttctcaac
ccaggccagatcagtgctacatgtgagacaataggctgcagtggctcagtagctgaattt
ttcttcaagtgtagaggtcatgaaaccagtggagaagatgatacatctgtgcccttgtat
ttggttcgtgccaacctccctgccgttccctgtttggcttgtacagatgtttcatcccct
gttgtggtgtttgaatgtgctgatgctcatgtaatgtgccttgattgttttgttacattt
tgtgtgtcaagactaaatgaaagacaatttgttcaagatgcacatttgggttatacttta
tcttgcccaattggttgtgcagattctctcattcgtgaagtgcatcactttaagttaatg
ggtgataaccattatgagcgatatcagagatttggtactgaagaagctgtgttggctgct
ggtggtgttttatgcccatatcctgggtgtgggcagggcattattcctgaccaagactgt
cgcagagtagtgtgtacaggtggttgtggatatgttttttgcagactctgtttacaaggt
taccacataggggagtgccacccagaggatggtaatggggctaatattgtagaaggcagt
ggagggtttgctgttgatctatctagggcatcaggctctcggtgggacgaagctacttca
gtggctatccgtgttactactaaaccatgtcccaagtgtagaacaccgacagaacgtgac
ggtggatgcatgcatatggtgtgcacacgtggtccatgtgggtttcattggtgctgggta
tgtcagactgagtggacaagggaatgcatggcagctcactggtttggttga
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