Panulirus ornatus (ornate spiny lobster): 139755425
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Entry
139755425 CDS
T10834
Symbol
thoc5
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5 homolog B
KO
K13174
THO complex subunit 5
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03013
Nucleocytoplasmic transport
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139755425 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
139755425 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139755425 (thoc5)
03041 Spliceosome [BR:
porn03041
]
139755425 (thoc5)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
139755425 (thoc5)
Spliceosome [BR:
porn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
139755425 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
partial_CstF
Motif
Other DBs
NCBI-GeneID:
139755425
NCBI-ProteinID:
XP_071529823
LinkDB
All DBs
Position
19:complement(19344549..19436129)
Genome browser
AA seq
754 aa
AA seq
DB search
MGREDDDGDTGSRESKRRRKGGTEVAKKIGESDNSVASSSTTVAATVQSRTPSKEKTTTI
ADTYQASLDHECLEAQDRMEEEDQELVASIIRHIRTLMKEILKLKLEKPDQWSNEVDERR
IQVLMLMLSLRRLSRVQKVRVRDSREKTAEARQSVDGVTLQLQNLLYEVAHLKKEVRRCL
DFQSADQEIDLVPVEQFYLEAPEYISRPTDTVEDPHEQRLARLHWELEQRRDQTQLFDKL
TQEKEAVAETINEQERKLASLAPRINSILEATRPLQDALDLPIDAKREQQRIVQLLPSPL
YTLWVQASAYGEAFDPSIKVEVFGDVDAAKKLIAKEEDSRTENLSESDNDQDQQEENLPR
KKRSRKSQKLDADDMDDGVKQILGLHPLFVKIHVNAKEGNSIVITFYYMQTLRIVTAKCS
VHLQEKTKSALTDVINGDTLLNCLFPDDDGQTSPNPANFYQLNRLRINLSDHLSTTGRPY
RWAQTLAGLSFSSSKQPVVNGEDLQDMSIGTGNSSLTAVPPNDNEVVVWQDSAEQMPNTI
LAIRRRLLARLALHAQLVNLETATSTSSIAIPAELLRQHFPGKVCSDLKSWCPVTWADYE
ATPSTQLLREAQVVTPQSLLFMAVFDRKHVRLEALVAVSPDHPNTVPVVSLSLHWEGHYQ
AANNPQLRQMEKEVNVHWDELVSTRSERLHLLPLLLYRLAVCLDVYTEAYSAHADARGPD
AQFHKEKIFFRPARGPDRAFPFKYHPKLGVFSQR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgagaggatgatgatggagacacagggtctcgagagtcgaagcggcggcgtaag
ggtggaactgaggtggctaagaagattggagagagtgacaactcggtggcatcatcatct
accacggtggcggccactgttcagtcccgcacccctagcaaggagaagaccacgacaatt
gcagatacttatcaggcaagcttggatcatgaatgtcttgaggcgcaggataggatggag
gaggaagaccaagagcttgtagcctccatcattcgtcacattcgcactcttatgaaagag
attctcaagctgaaattagaaaaacctgatcagtggtcaaatgaggtggatgaacggcgt
attcaagttctcatgttgatgttgtcacttcgtcgtctcagtcgagtacaaaaggttcgt
gtacgtgattcacgtgaaaaaacagctgaagctcggcagagtgttgatggggtgactttg
cagttgcagaacctcctttatgaagtggcccatttgaagaaagaagttaggcgttgttta
gattttcaatcggctgaccaggaaattgatcttgtgccagtagaacaattctacctcgag
gcaccagaatatatcagccgaccaactgatactgtggaagacccacatgagcaacgtttg
gctcgtctgcattgggaactagaacagcgccgtgatcagacgcaactgtttgacaaactc
actcaggagaaagaagctgtagcagaaactataaatgaacaagaacgtaaacttgcctca
ttagctccaagaattaattcaattctagaagcaactcgtcctcttcaagatgccttggac
ttgcccatagatgctaagagggagcaacagagaatagtgcagctattacctagtcctctc
tacacactctgggttcaggcatctgcatatggggaagcatttgatcccagcattaaggtt
gaagtctttggagatgttgatgctgccaaaaaactcatcgcaaaagaagaagattctcga
actgaaaatttgtctgaatcagataatgaccaagatcaacaggaggagaatctgcctcgc
aagaaacgcagccgaaagtcccagaaattggatgcagatgatatggatgatggtgttaag
cagattttaggattgcatccactctttgtaaagattcatgttaatgcaaaggagggtaac
agcatagtcatcacattctattacatgcagaccctgcgcatagtgacagcaaagtgttct
gtgcatcttcaggagaaaacaaagtctgcacttacagatgtgatcaatggggatacactt
ctaaattgtctcttccctgatgatgatggacaaacttcaccaaacccagcaaacttttac
cagctgaaccgtcttcggataaatctctcagatcatctgagcacaactggtcgaccttat
agatgggctcagactttggctggtttgtcattttcaagttctaagcaaccagttgttaat
ggagaagacctacaggatatgtcaataggaactggaaactcatcgttgacagctgttccc
cctaatgataatgaggtggttgtgtggcaggatagtgctgagcagatgccgaatacaatt
ctggctattcgtcgcagactgcttgctagattggctctacatgcacaactggtgaacctt
gagactgcaacttcaactagctcaattgcaatccctgctgagctactacgtcagcacttc
ccagggaaggtgtgctctgacttgaagtcttggtgtccagtaacttgggcagattatgag
gcaactccatctactcagttattgcgagaggctcaagtagtcacgccacaaagtttatta
ttcatggcagtatttgatcgcaagcatgttcgtctggaagccttggtggcagtctctcct
gaccatccaaatactgttcctgtggtgtcactgtctcttcactgggagggtcactaccag
gctgcaaacaacccacaacttaggcaaatggaaaaagaggtaaatgtacactgggatgaa
ctagtatcaactcgtagtgaacgcctccacctcctcccactgctgttgtatcgtttggca
gtatgtttagatgtttacacagaggcctacagtgctcatgcagatgctcgtgggccagat
gcacagttccataaggagaagatatttttcagacctgccagaggtccagacagagctttt
cccttcaagtaccacccaaaacttggtgtcttctcacagcgttga
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