Panulirus ornatus (ornate spiny lobster): 139755882
Help
Entry
139755882 CDS
T10834
Symbol
mor
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139755882 (mor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porn03021
]
139755882 (mor)
03036 Chromosome and associated proteins [BR:
porn03036
]
139755882 (mor)
Transcription machinery [BR:
porn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139755882 (mor)
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139755882 (mor)
PBAF complex
139755882 (mor)
GBAF(ncBAF) complex
139755882 (mor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
139755882
NCBI-ProteinID:
XP_071530674
LinkDB
All DBs
Position
20:5512301..5559461
Genome browser
AA seq
953 aa
AA seq
DB search
MAINARKDGGPNVKYYESTETVSQFENVKTWLMKNAKKYVQADPPNNKALSQLVVQLLQF
MEDNFGPKVTKAPMTKLPMKCFLDFKPGGGLCHILSTVYKFKSDQGWRRFDFQPTMPGHH
KQHQSSALSPSRKDANIELFREIEKSLLSNKCWNKPSVFIHSEVDKELRNELKDIVKRHD
GKIVEEEEEASHIVYDEQDPLEDEFARAVMRRDRQTLFHFFYMPDSYDSWASGVELDYDP
PESPQFFDGQWKVCANWLQDLESYNEWMNEEDYEVDDSGTKKKHRGCLSVDDTMGLSDPD
KKKKAKKRPRSPPSPRYKKKSSRNTTTPGKPVKKTKIEEEEEDLTRDMEDPTPEPAVTEV
TTGSKIQPSKGGNYMDLDDEGGEKTEKTEGPPVPESEDTATDQTHHIIVPSYAAWFDYNA
IHAIEKRGLPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAV
MRVHAFLEQWGLINYQVDADARPTPMGPPPTSHFHVLADTPAGLQSVNPPKVSQPSAAKQ
LMDFEKKPITDKKPDFSIGTDFGLKLDQYSKKTGALKNKSAASQAREWTEQETLLLLEAL
EMYKDDWNKVCEHVGTRTQDECILQFLRLPIEDPYLEDSEVGSGASACALGPLAYQPIPF
SKSGNPIMSTVAFLASVVDPRIAASAAKAAMDEFCRIKDEVPAALLDSHIKNVADHAASN
EGKVDPAAGLGKTGIAGTEPEGEEKKEGEGDSEKKDDAKKDSEKKEDEKKDEVEKEKKDE
AMEVDKPEEKKTDEKKEGEEEEKKDEKGDTKEEKKEEISPEEKKLDAERERLRKDASVQQ
AASAALGSAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRERESL
ELQRQQLLQERQQFHLEQLKAAEMRARQHALHQLTQGASPAHSPAPSLTQVHQ
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaacgctaggaaggatggtggccctaatgtcaaatactacgagtctactgag
actgtttctcagtttgaaaatgtcaaaacatggctcatgaaaaatgcgaaaaagtatgtg
caagcagatcctccaaacaacaaagctctgtctcaattggtggttcagttgctacaattt
atggaagataattttggtcccaaggtcacaaaagctcctatgacgaaattaccgatgaaa
tgtttccttgacttcaagccaggcggtgggctgtgtcacatactaagtactgtgtataag
ttcaagagtgatcagggttggcgcagatttgatttccagccaacaatgccaggccaccac
aagcaacatcagtcttcagctttgtcgccgtctcgtaaagatgccaacatagagctcttc
cgtgagatcgagaagagtttgctttctaacaaatgctggaacaagccctcggtgtttata
catagtgaagtagataaagaactccgcaatgaactgaaggacattgtgaagagacatgat
ggaaagattgttgaagaagaggaagaagcatctcacattgtatatgatgagcaagatcca
cttgaagatgagtttgcacgcgcagtgatgcgtcgtgaccgacagacactgttccatttc
ttctacatgcctgattcatatgattcatgggcatcaggcgtagaattggattatgaccct
cctgagtcacctcaattctttgatgggcaatggaaggtatgtgccaactggctgcaagac
cttgaatcttacaatgagtggatgaatgaggaagattatgaggtagatgatagtggaact
aagaaaaaacaccgcgggtgtttgagcgttgatgatacaatgggcctaagtgatccagat
aaaaagaagaaggccaagaagagaccaagatcaccaccatcacctcgatataaaaagaaa
agctcacgcaacactaccacccctgggaaaccagtgaaaaagaccaaaattgaagaagag
gaagaagatctcactagagacatggaggacccaacgcctgagcctgctgttacagaggtt
acaactggttccaaaatacagcccagtaaaggtggaaattatatggacctagatgatgaa
ggaggagagaagacagaaaaaactgaaggaccacctgttccggaaagtgaggacactgca
actgatcagacccatcatataattgtccctagttatgctgcctggtttgattacaatgcc
attcatgctattgagaaaagaggccttccagaattttttaatggcaaaaataaatccaag
actccagaaatatatcttgcatatagaaactttatgattgacacttacagattaaatcct
acagagtacctaacatccactgcgtgccgtcgtaatcttgctggcgatgtttgtgctgtg
atgcgtgtacatgcattccttgaacagtggggattgattaattaccaggttgatgcagat
gccagaccaacccctatggggcctcctccaacttcccacttccatgttttagctgacacg
ccagctggtcttcagtctgtcaacccgcccaaggtcagccagccatcggcagcaaaacag
ttgatggattttgaaaagaaacctattactgataaaaagcctgacttcagcataggcact
gactttgggctcaaacttgatcagtattctaaaaagacaggggctcttaaaaacaagtct
gctgccagtcaggctcgtgaatggacggaacaggaaacattacttttgttggaggctctt
gagatgtacaaagatgactggaacaaggtatgtgaacatgtgggcaccagaacacaggat
gaatgcattcttcagtttctccgtttaccgattgaagatccttatttggaagattcagaa
gttggttctggagcatcagcatgtgcactcggtcctcttgcttaccaaccaatcccattt
agtaaatctggtaacccaatcatgtccactgttgcattccttgcatcagtggttgatcct
cggattgcagcttcagctgcaaaagctgcaatggatgaattttgcagaatcaaagatgaa
gtaccagctgcccttcttgactctcacattaagaatgttgctgatcatgcagcatctaat
gagggaaaagtagatcctgctgctggcttaggtaaaacaggtattgctggaacagagcca
gaaggagaggaaaagaaagaaggtgaaggagactctgaaaagaaagatgatgctaaaaag
gatagtgagaaaaaagaggatgagaagaaagatgaagttgagaaagaaaagaaagatgaa
gcaatggaagtagataaaccagaggagaagaagactgatgaaaagaaggaaggagaagaa
gaagaaaagaaagatgaaaagggagataccaaagaagaaaagaaagaagaaatcagccca
gaagaaaagaaacttgatgcagagcgagagagattacggaaagatgcttcagtccaacaa
gcagccagtgctgctttagggtcagctgcagtaaaagcaaaacatttagctgctgtagaa
gaaagaaaaatcaaatctctagtggcattgctggttgaaacacaaatgaagaagcttgag
ataaaactacggcactttgaggaacttgaaaccataatggacagagaaagggagagctta
gagttacagcgtcaacagctgttgcaggaacgtcagcaatttcacttagagcagttgaaa
gctgcagaaatgcgagctcgtcaacatgctttacatcagttaactcaaggggcaagtcct
gctcattccccagccccatcattgacacaggttcaccagtag
DBGET
integrated database retrieval system
