Panulirus ornatus (ornate spiny lobster): 139756048
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Entry
139756048 CDS
T10834
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
porn03009
]
139756048
Enzymes [BR:
porn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139756048
Ribosome biogenesis [BR:
porn03009
]
Eukaryotic type
Pre-60S particles
Helicases
139756048
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GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
139756048
NCBI-ProteinID:
XP_071531129
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All DBs
Position
20:complement(59869895..59882050)
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AA seq
584 aa
AA seq
DB search
METSWDSLPVNLLKPIKQTIQDFGFMSMTPVQAACIPLLLKHKDVAAEAVTGSGKTLAFL
IPVIQILKKLEYPLKKHDIGALIVSPTRELASQIHEVLQGFLKHIPQLTSLLTVGGSYPS
DDIENFGNTGAHIIVGTPGRLQDLLARNGKGGPSLAAGVRALEILILDEADRLLDLGFFD
TLNTIFAYLPKQRRTGLFSATQTSDVISLIRAGLRNPVQVKVKENEATGNEKTPLSLHNY
FMVCKEDKKFATLVTLLKEREAEKVMVFLATCACVEYFSVALGVFLKNIKILSSHGKMKN
KRFTIFNQFRSLESGVLLCTDVMCRGVDIPSVDWVIQYDPPSSAAAFVHRCGRTARIGNE
GSAIVMLLPNETEYVEFIKLNQEVTLHTMTAPTNIPDLLNKMRKLQLQDRMTMDKANRAF
VSYIQSYAKHECNVLLNVKSLNFGRIATSFGLLKMPKMPELKGIKITDFDPVNMDYNTIT
YKDKLKEKSRQKKLCLYKETGQWPGMKQHRQQTEPWSKQKEKKERKKRKKEKKRKGHQFT
QEDLDDLEKDFRMVKKFGKGRVKAKDFDAYFGCETEDEVEKSVK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatcatgggacagtttgccagtgaatcttctgaagcccattaaacaaactatc
caagactttggttttatgagcatgactcctgttcaggcagcatgcattccgttgcttctt
aaacacaaggatgtagcagcagaagcagtaacaggtagtggcaagactttagcatttttg
attcctgttatccagattctaaagaagctggagtacccattgaagaagcatgacattggt
gctcttattgtgtctcctactcgtgagttggcctcacagattcatgaagtactgcaaggc
tttttaaaacacataccacagcttacttctctgctaacagttggaggatcatatcccagt
gatgatattgagaatttcggaaacactggtgcccacattattgtgggtacaccaggccgt
cttcaagatttgttagctcgtaatggcaagggaggtcctagtcttgctgccggtgtaaga
gcgctggagatattaatccttgatgaagctgacagacttttggacttgggtttttttgat
actcttaatactatttttgcctacctcccaaagcaaagaagaacgggattgttttcagct
acacaaacctcagatgtgatcagtctcattcgcgcaggactgcgaaacccagtgcaggtt
aaagtgaaagaaaatgaagctacagggaatgagaaaacacctctttccctccacaattat
tttatggtatgtaaagaagataaaaaatttgcaaccctggttacacttttgaaagaaaga
gaagcagagaaagtaatggtatttctggctacgtgtgcatgtgttgaatacttttcagtt
gccctgggagtatttttgaaaaatataaagattttgtcctcacatggtaagatgaaaaat
aagagatttacaatatttaatcagtttcgatcacttgagtctggggttctgttatgcaca
gatgtgatgtgtcgtggtgttgatatcccaagtgttgactgggttattcagtatgaccct
ccctcttctgcagctgcttttgtccaccgttgtggtcgtactgcaaggattggtaatgag
ggctcagccattgtcatgttacttccaaatgaaacagaatatgtagaattcatcaaactg
aaccaggaggttactttacataccatgactgctccaacaaatatacctgatctgttgaat
aagatgaggaaactccagctccaggatcgaatgacaatggataaagctaaccgagcattt
gtttcatacatacagtcttatgcaaagcatgagtgcaatgtgttattgaatgtgaaaagt
ctcaattttggtcgcattgctactagctttggattactgaaaatgcccaaaatgcctgag
ttaaaaggtattaaaatcaccgattttgacccagtgaatatggattataacacaatcacc
tacaaagacaagctaaaggagaagagcagacaaaagaaactttgcctatataaagagaca
ggtcagtggcctggcatgaagcagcacagacaacaaacagagccttggtccaagcagaag
gagaagaaagaaagaaagaagagaaagaaagaaaagaagcgaaaagggcaccaatttaca
caggaggacttggatgatcttgaaaaggacttccgcatggttaagaaatttggaaaaggc
agggtgaaagccaaggactttgatgcatactttggttgtgaaactgaagatgaagtagag
aaaagtgttaagtaa
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