Panulirus ornatus (ornate spiny lobster): 139756615
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Entry
139756615 CDS
T10834
Symbol
Polr2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03020
RNA polymerase
porn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
139756615 (Polr2B)
09124 Replication and repair
03420 Nucleotide excision repair
139756615 (Polr2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porn03021
]
139756615 (Polr2B)
03400 DNA repair and recombination proteins [BR:
porn03400
]
139756615 (Polr2B)
Enzymes [BR:
porn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
139756615 (Polr2B)
Transcription machinery [BR:
porn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
139756615 (Polr2B)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
139756615 (Polr2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
139756615
NCBI-ProteinID:
XP_071532366
LinkDB
All DBs
Position
22:19636028..19669223
Genome browser
AA seq
1180 aa
AA seq
DB search
MMAFADIDEDMAYGDEDGDEISPDIWQEACWLVISSYFDEKGLVRQQLDSFDEFITMTIQ
RIVEDSQAIDLQAEAQHTAGELETPPRHLLKFEQIYLSKPTNWEKDGYNYSMMPNEARLR
NLTYSSPLYVDIVKTVIKDGEKPVEHKEEKIYIGKIPIMLRSTYCLLSGLTDRDLHEVNE
CPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKCEIRSCIEHSARPVSTLW
INMMARGGSSAKKSAIGQRIIGVLPYVKQEIPVMIVFRALGFVADRDILEHIIYDFDDPE
MMEMVKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDF
CETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLMALLFRGLFRNLMKEVR
MHAQKLLDKGQEYGLDAAVKPKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFA
STLSHLRRVNSPIGRDGKLAKPRQLHNSLWGMICPAETPEGAAVGLVKNLALMSYISVGS
QPAPILEFLEEWSMENLEEIAPSSIDDATKIFVNGCWVGIHRDPEQLMMTLRKLRRQMDI
IVSEVCMVRDIRDREIRIYTDAGRICRPLLVVENGKLLLKKRHIDLLKEREYNNFSWQDL
VASGVVEYIDCSEEETIMIAMSLEDLGLEEEKTYCNTYTHCEIHPAMVLGVCASIIPFPD
HNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLFYPQKPLVTTRSMEYLRFRELPAG
INSIVGIACYTGYNQEDSVIMNLSAVERGFFRSCFYRSYKDAETRRSGMQEEMFEKPSRD
TCQGMRHAIYDKLDEDGIISPGMRVSGDDVIIGKTITLPENEDELEGQTRRFSKRDASVF
LRGSETGIVDQVMLTVNVDGDRFTKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRVEDMP
FTAEGITPDIIINPHAIPSRMTIGHLIEALQGKLGANKGEIGDATPFNDAVNVQKISNLL
QEYGYHLRGNEIMYCGHTGRKMNAQIFLTPTYYQRLKHMVDDKIHSRARGPVQILVRQPM
EGRAREGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYSVHVCNLCGLMCIANLRNNTF
ECKGCRNKTQISQVRLPYACKLLFQELMAMNIAPRMMVIK
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgatggcctttgcggatatagacgaagatatggcctatggtgatgaagatggagatgaa
atttcaccagacatctggcaggaggcttgttggcttgttatctcatcatactttgatgaa
aagggtcttgttcgacagcagctggattcatttgatgaattcatcactatgacaattcag
aggattgttgaagattcccaggctattgatctccaggcagaagcccagcatactgctggt
gaactagaaactccaccacgtcacttgctgaagtttgaacaaatttacctcagcaaaccc
accaactgggagaaggatggttataattatagcatgatgccaaatgaagcacgtttaagg
aacctcacctactcctctcctctgtatgttgacattgtcaaaacagttatcaaggatgga
gaaaagccagttgagcataaagaagagaaaatttacataggcaagatccccatcatgctg
cgatcaacttactgtctgttgagtggactgactgatcgtgaccttcatgaagtaaatgaa
tgtccgctagaccctggtggttatttcatcatcaatggctctgagaaagtgctgattgcc
caggagaagatggcaactaatacagtttatgtgttcagcatgaaggatgggaaatatgct
tacaagtgtgagattcgctcatgtattgaacattcggctagacctgtatcaacgctctgg
atcaacatgatggctaggggtggtagtagtgcaaaaaaatctgccattggtcaacgtatc
attggtgttttaccatatgtgaagcaggaaatcccagtgatgattgtctttcgtgctctg
ggctttgtagccgatcgagatattttagaacatatcatttatgacttcgatgatcctgag
atgatggaaatggtcaagccttctttggatgaagcctttgtgattcaggagcagaatgtt
gcactaaatttcatcggcagtcgtggtgctcgtcctggtgtaacaaaagagaaacgtatc
aaatatgcacgtgaaatcttgcaaaaagaaatgttgccacacgtgggtgtgtctgacttt
tgtgagacaaagaaggcttatttcttgggttatatggtccatagacttctgcttgcagct
ttgggtcgtcgagaactcgacgatcgtgatcattatggaaacaagaggttggatttggct
ggccctctcatggctttgcttttcagagggttgttccgaaacttaatgaaggaggttcgt
atgcatgctcaaaagctattggataagggtcaagagtatggtttggatgctgcagttaaa
cctaagctcattactgatggcttgcgatactctttagccactggaaattggggggaccag
aagaaagctcatcaagcgagggctggtgtctctcaggtgttgaaccgcttgacatttgcc
tcaacattatctcaccttcggcgtgtgaactctcctattggccgagatggtaaattagca
aagccaagacagctgcacaattcactgtggggaatgatctgtcctgcagaaacaccagag
ggagctgctgtaggtttagtgaagaatctagccctcatgtcatatatctctgtcggttct
caaccagcacctatcttggagttcttggaggaatggtctatggagaacttagaggaaatt
gcgccatcatcaattgatgatgccacgaaaatttttgttaatggttgctgggttggcatt
catcgtgacccagagcagcttatgatgaccctgcgcaaattgagacgtcagatggatatc
attgtttcagaggtttgcatggttcgagacattagggacagagaaatacgtatctataca
gatgctggtcgtatctgtcgtcctctgttggtggtggaaaatggtaaactgcttctcaaa
aagagacatatcgacttgctgaaggagagagagtataacaacttcagctggcaggacctg
gtagccagcggtgtggtggagtatattgactgttctgaagaagagactatcatgattgcc
atgtcacttgaggacttgggtttagaagaggagaagacctactgtaacacttatactcac
tgcgagattcacccagccatggtccttggagtatgtgcctctatcatccccttccctgat
cacaatcagtcccctcgtaacacttaccagagtgctatggggaagcaagccatgggtgta
tatattactaatttccacgttcgaatggacactcttgcacacgtactattttaccctcag
aaaccccttgtaactacacgttctatggagtacctccgtttcagagagttgcctgcaggc
atcaactctatcgttggtattgcttgttatactggctataaccaagaagactctgtcatt
atgaacctgtctgctgtggagcgtggattcttccgatcgtgtttctatcgctcttacaaa
gatgcagagacaaggcgctctggcatgcaggaagaaatgtttgaaaaaccttcaagagac
acttgccaaggtatgcgacatgctatatatgacaagttggacgaagatggaattatctca
cctggcatgcgtgtatctggtgatgatgtgatcattggaaagaccatcactttgccagaa
aatgaagatgaacttgaaggtcaaactagacgcttcagcaagagggatgcaagtgtattt
ttgaggggctcagaaactggtattgttgaccaagtcatgttgacagtgaatgtggatggt
gatcgtttcaccaagattcgtgtgaggtcagtccgcattcctcagattggtgataaattt
gcctcccgtcatggacaaaagggtacttgtggtattcagtacagagtagaggacatgccc
ttcactgcagaaggaattactccagacatcatcattaatcctcacgccattccctcacga
atgacaattggtcacttgattgaagctctccaagggaagcttggtgctaataagggggag
attggtgatgctacacccttcaacgatgctgtgaatgtgcaaaagatttccaacttgttg
caggaatatggttatcacttgagaggcaatgagattatgtactgtggtcatactggacga
aaaatgaatgctcagattttcttaactcctacatactatcagcgtttaaagcatatggtg
gatgataagatccattcccgagctagaggtccagtacagatccttgtgaggcagcccatg
gaaggtcgtgcaagggaaggtggtttacgttttggtgaaatggaacgagattgccagatt
gctcatggtgctgcacagttcttgcgtgagcgtctttttgaagtcagtgacccatactct
gtccatgtttgcaacttgtgcggccttatgtgcattgctaacctgcgcaacaatacattt
gaatgtaaagggtgccggaacaagactcagatttcacaggtgcgacttccatatgcctgc
aaattgcttttccaagaattaatggcaatgaacattgctccaagaatgatggtgataaag
tga
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