Panulirus ornatus (ornate spiny lobster): 139756803
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Entry
139756803 CDS
T10834
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03030
DNA replication
porn03420
Nucleotide excision repair
porn03430
Mismatch repair
porn03440
Homologous recombination
porn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139756803 (RPA1)
03420 Nucleotide excision repair
139756803 (RPA1)
03430 Mismatch repair
139756803 (RPA1)
03440 Homologous recombination
139756803 (RPA1)
03460 Fanconi anemia pathway
139756803 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
porn03000
]
139756803 (RPA1)
03032 DNA replication proteins [BR:
porn03032
]
139756803 (RPA1)
03400 DNA repair and recombination proteins [BR:
porn03400
]
139756803 (RPA1)
Transcription factors [BR:
porn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139756803 (RPA1)
DNA replication proteins [BR:
porn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
139756803 (RPA1)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
139756803 (RPA1)
MMR (mismatch excision repair)
139756803 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
139756803 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
139756803
NCBI-ProteinID:
XP_071532707
LinkDB
All DBs
Position
23:complement(9832032..9870006)
Genome browser
AA seq
606 aa
AA seq
DB search
MAELTRGAIAKIIEGSHPENPVLQIISMKRIPSGTQERFRLLVSDGQWSSSFAMLATQLN
PKVDSGEVSNFCVMRMNRYVCNTVQENKKVLIILDLTVEKRGEEVGIKLGDPVNYDPNKN
KAQQQQPQQHLPPSRPTSAVASPDGIQQRTPLAQRGAPNLGISPSRTPAGANVLPIASLT
PYQNRWTVCARVSNKSDIRTWSNSRGEGKLFSMDLLDESGEIRATAFNEQVDKFHDMIEI
NKVYYISGANLKTANKQYSTLNNDYEMSFNKMTEVTPCHELTSIPTMQFNFIPLDQLENV
KKDSVVDVIGVCKETMDMSTVTQRSTGRELKKREVQIVDDTNREVRLTLWGTGAENFDGS
QQPVLAVKGARLSDFNGCSLSLLSSSCLQINPDIREAHKLKGWFDNGGNVADTVNLSSQR
GAGGGGSGGNFMTFVEAKAANLGGGDQADYYTNKASIVLMRKENSLYPACPSDSCNKKVI
DMNNGLYRCEKCNREYDTFNWRLMLSANIADFTDNLWITAFQDQAEVMLGITAQELGTMR
ESNPEAFQSIFTAAAFQTFTFKLRVKMETYNDETRLKSTVVSCNPVDPKEYNRRLISEIK
QMSGQT
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattaaccagaggagcaatagcaaaaattattgagggttctcaccctgaaaat
ccagttcttcaaatcatatcaatgaaacgcataccgagtggtacacaagaacggtttcgt
cttctggtgtccgatggccagtggtcaagcagctttgcaatgcttgccacacagctaaat
cctaaagttgacagtggagaagtttccaatttctgcgtaatgcgaatgaatcgttatgtt
tgtaatacagttcaggagaataagaaggtcctgatcattcttgatctaactgtggaaaag
cgtggagaagaagtcggtatcaaactgggagaccctgtgaactatgaccccaataagaat
aaagcacaacaacaacagccacagcaacatctaccaccttctcgacccacatctgccgtg
gcttcacctgatgggatccaacaacgtactcctctagcacagcgcggtgcaccaaattta
ggaatttccccttcccgaacaccagcaggtgccaacgttctcccaattgcttctctcact
ccataccagaatagatggactgtctgtgctcgtgttagcaacaagtcagatattcgaact
tggtccaactctaggggagagggcaagctcttctcaatggaccttcttgacgaatctggg
gagatacgtgccacagcctttaatgagcaagtggataaatttcatgatatgattgagatt
aacaaggtatattacatcagtggtgccaatcttaaaactgccaataagcagtattccact
ctcaacaatgattatgaaatgtccttcaataaaatgactgaggtaacaccatgccatgaa
ctcacatccataccaactatgcagttcaacttcattcctctagatcaacttgagaatgtg
aagaaagattcagttgtagatgttattggagtatgtaaggagaccatggacatgagtact
gtgacgcaaagatcaactggccgtgaactgaagaagagagaggtgcagattgttgatgat
acaaatagagaagtacgattgacactctggggaactggggcagaaaattttgatggatca
caacaacctgtccttgctgtaaagggtgcaagattgtcagacttcaatggatgttctttg
tcactcctctcctcatcatgccttcagattaaccctgacattcgagaggcccacaaactg
aaaggatggtttgataatggggggaatgttgcagatactgtaaacctttcaagtcagaga
ggtgcaggtggtggaggctccgggggtaacttcatgacatttgtggaagctaaagctgca
aacctaggaggtggagaccaagctgattattatacaaacaaagcatccattgtattgatg
cgcaaggaaaattctctctaccctgcttgcccatctgatagttgcaacaagaaggttatt
gacatgaacaatggcctctacaggtgtgaaaagtgcaaccgcgagtatgacacatttaat
tggagacttatgttatcagccaatattgcagactttacagacaatttgtggataacagca
tttcaagatcaagctgaggttatgcttggaattactgcacaagaacttggtaccatgaga
gaaagtaaccctgaagcattccagagcatcttcacagctgcagcattccaaacttttact
ttcaaactacgtgtcaaaatggagacatataatgatgagacccgattgaagagcacagtt
gtaagctgtaacccagtggaccctaaggaatataatcgccgtctgatttctgaaataaag
caaatgtctggccaaacataa
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