Panulirus ornatus (ornate spiny lobster): 139756994
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Entry
139756994 CDS
T10834
Symbol
Chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porn03021
]
139756994 (Chd1)
03036 Chromosome and associated proteins [BR:
porn03036
]
139756994 (Chd1)
Transcription machinery [BR:
porn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
139756994 (Chd1)
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
139756994 (Chd1)
SLIK complex
139756994 (Chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_CHD1_Hrp3
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
DUF6511
PAP-OAS1
Motif
Other DBs
NCBI-GeneID:
139756994
NCBI-ProteinID:
XP_071533037
LinkDB
All DBs
Position
24:complement(307914..654917)
Genome browser
AA seq
1492 aa
AA seq
DB search
MREHVEDSGSDSDEEQSGSISGSDNDNESDNNENESKSDAGSDSGSGSGSASVSGSGSSS
DSSDNNNSDSDSENKQSGSDEEDEGDDEDKDDNEEQEEDQDDDQDEEQEDDENDRSGSSS
NSSGRSKSRKGGKDELKPNTLQCWEENPDIYGIRRSVRERKEPDRMKVEHQGTSKKHRKR
KSSSQWNSSEQSDSENSDYDSPKPRRKPPSKKSSSSSSKKSSHKKQKSSSEGSESEGESK
RRGSNRAAKEVSYKEAESEDEEDDEEDLIKVDWSQSSSKEDENAHTVEKVLDHRTGKKGA
VGMQTYIYEVEKNGDPNSDFDPNDPEQVEVQYLIKWKGWAHLHNTWESDESLKTQKYNAF
QVKGMKKVENYLRKLEDMNLWRQQASPEEVEYMEIQSELEKELHQSHIRAERIFAEAEEN
ENHYYYVKWENLPYAEATWELEDIVIARFNEQLESFREREKSTCTPKQCPALKHRPKFSP
LKIQPDYLGCGSEDLKLRDYQMEGVNWLIHAWCKHNSAILADEMGLGKTIQTIAFLSYLF
HTHHMYGPFILVLPLSTINAWQREFAAWAPDINVIVYIGDRDSRRIVREYEWTHSTKRIK
FNAVLTTYEILLRDKDDLRDSCHWACLVVDEAHRLKNEESQLYQALKEFRTNHRLLITGT
PLQNSLKELWALLHFIMPEKFDDLEYFESQHDGENMKKGIPRLHRLLQPFLLRRVKKEVE
KSLPSKVEQILRVDMMQQQKQYYKWILTKNYDMLKKGNKGSTSSFVNIVMELKKCCNHCF
LTKPPDDVNNADILQQLLRGSGKLMLLDKLLVRLRETGHRVLIFSQMVRMLDILAQYLQY
RRFPFQRLDGSIKGEIRRQALDHFNADGSNDFCFLLSTRAGGLGINLATADTVVIFDSDW
NPQNDLQAQARAHRIGQKNQVNIYRLVTKNSIEENIIERAKQKMVLDHLVIQSMDTSGRT
VFNKKMSSSNSTPFNREELNAILKFGAEELFKDDDENEEEPVCDIDEILKRAETREEAPS
LAGEELLSAFKVASFTLDEDEEVSKLDSIADENTKDWDEIIPEDFRSKVEEEERQKEMAD
LYLPPRKRKTMNQGGQREDGKPRAKRKRDDSESNNDDSDDGRPKKRGRPRMHHKETVKGF
SDVEVRRFFKSFKKFSKPLRHLDTIAYDADLKEKPINDLRKLAELIIERCEEAMKEHESQ
KENEKTAEVNGEGQPKRNRGPSFKLSGVTINAKTTLTTLEELAPLDSVVPHAPVERASWT
LQIKRVKDAHWDIPWGIADDSRLLRGIYEYGMGSWEQIKGDPALNLGDKILLGDETKPQR
KHLESRAQYLLKLIRKHMDLGPVQPTKMRKTVKPRKPVRELKEISKAIIENDDSSDDGVT
NSSMVSSTSLKKVPKVNDEPKEHKESKESKIKSKDIKEEKEDGDKIKEEADIKDGEKIKK
KKEKKEKKEKKDKEKKAGPVHITANGEPVPLDETKELDKTHPLWDEVCQTSS
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgagggagcatgtagaggacagtggctcagacagtgatgaggagcagtctgggtcgatt
agtggctctgataatgacaatgaatcagacaacaatgaaaatgagagcaagtctgatgct
ggcagtgactcaggatctggatctggtagtgcaagtgtgtctggttcgggaagttcatct
gactcatcagataacaataattctgattcagactctgaaaataaacagtctggatcagat
gaggaagacgaaggagatgatgaagataaagatgataatgaagaacaggaagaggatcag
gatgatgatcaggatgaagagcaagaggatgatgagaatgatcgatctggtagctcctcc
aacagcagtggacggagcaagtctcgtaagggtggaaaggatgaactgaaaccgaataca
ttgcagtgttgggaggagaatcctgacatctatgggatccgtcgctctgtgagggagcga
aaggaacctgatcgtatgaaagttgaacatcaaggaacttctaaaaagcacaggaagaga
aagagttctagtcagtggaacagttcagagcagtctgacagtgaaaattcagactatgat
tcaccaaaacctagaagaaagcccccaagcaagaagtcaagttcatcctcctccaagaag
tcatcacacaaaaaacagaaaagtagtagtgaaggaagtgagagtgaaggtgaaagcaaa
agacgaggatcaaatcgtgctgccaaagaagtcagctataaggaagcagaaagtgaagat
gaagaggatgatgaagaagacctgataaaggtggactggtcccaatcgtcatctaaagag
gatgaaaatgctcacacagtagagaaggtgttagatcatagaactggcaagaaaggagct
gttgggatgcagacctacatatatgaagttgagaaaaatggtgacccaaattctgatttt
gatcctaatgatcctgagcaagttgaagtccagtacctaattaagtggaagggttgggct
cacctccacaacacttgggaatcagacgagtccttaaagacccaaaagtacaatgcattt
caggtcaaaggtatgaagaaggtggagaattacctgcggaaattggaggacatgaacctc
tggcggcagcaagcatccccagaagaagtagagtacatggagattcagtctgaattagaa
aaggaattacaccagtctcatatcagggcagagagaatatttgcagaagctgaggaaaat
gaaaaccattattattatgtgaagtgggagaaccttccatacgcagaagcaacatgggag
ttggaggatattgtcattgctagatttaatgaacaactggagagttttcgagaacgtgag
aaatccacttgcactcctaaacagtgcccagcattgaaacacagaccaaagttttctcca
ctaaagatacaaccagattacctgggttgtggaagtgaggatctcaagttgagggactat
cagatggaaggtgtgaattggttgattcatgcatggtgtaagcataattcagctattttg
gctgatgagatgggtcttggtaaaaccatccagacaattgcatttctaagttacctgttc
cacacacaccacatgtatggtcctttcatccttgtcttaccgctgtctacaattaatgcc
tggcagagagagtttgcagcatgggctccagacattaatgttattgtatatattggtgat
agggactctagaagaattgtaagagaatacgaatggacacactcaacgaaacgtatcaaa
ttcaatgctgttctcacaacatatgaaattctcttacgtgacaaggatgatctgcgagac
tcatgccattgggcatgcctcgtagttgatgaggctcataggttgaagaatgaagagtcc
cagttgtatcaggctctgaaggaattccgcacaaatcatcgattgctcatcacaggtact
cctcttcagaactcccttaaggaactatgggccctcctccattttatcatgccagaaaaa
tttgatgatttggaatattttgagtctcagcatgatggagagaacatgaagaagggtatc
cctcgtctccatcgtctccttcagcctttcttactacgcagagtgaagaaagaggtagag
aaatccctaccatccaaggtggagcagatcttgcgtgtagatatgatgcagcaacagaaa
cagtattataaatggatccttaccaaaaattatgatatgttaaaaaaaggcaacaaagga
tcaacatctagttttgtcaatatcgtgatggaactcaagaagtgctgtaaccactgtttt
ttaactaaacctccagatgatgtaaataatgcagatattcttcagcaattattaagaggc
agtggcaagttaatgctcttagataaactcctggtgcggcttcgagaaacaggccaccgt
gttcttatcttctcacaaatggtacgcatgctggatattttggcacagtatttgcagtac
cgccgcttccccttccagcgactggatggatccattaaaggggaaatacgtagacaagct
ctggatcacttcaatgctgatggctcaaatgatttctgctttctactatcaactcgagct
ggtggacttggtattaatcttgctacagctgacactgtcgttatctttgactcagactgg
aacccccagaatgaccttcaagcacaagctagagctcatcgcattggtcagaagaatcag
gttaacatataccgtctagtgaccaagaacagtattgaggaaaatatcattgaacgagcc
aaacagaagatggttttagatcacctcgttattcagtctatggacacctcaggacgtact
gtcttcaacaaaaagatgtctagctcaaattccactccatttaaccgcgaagaactaaat
gcaatcctcaagtttggtgctgaagagctgtttaaagatgatgatgagaatgaagaggaa
cctgtgtgtgatattgatgaaattctcaagagggctgaaactagggaagaagcaccatct
ttggctggggaggaacttctgtcagctttcaaggtagcatcatttactctggatgaagat
gaagaagtatcaaaattggactccattgcagatgagaacacaaaagactgggacgaaatt
attcccgaagatttccgaagcaaagtagaagaggaagagcgtcaaaaggagatggcagat
ttgtaccttcctccacgaaaacgaaaaactatgaatcaaggtggtcaaagggaggatggt
aaaccacgtgctaaaaggaagcgtgatgattcagagtccaacaatgatgactctgatgat
ggaaggcccaagaaacgtggtcgaccaaggatgcaccacaaggaaactgttaaaggattc
tctgatgtggaggtgcgaagatttttcaagagtttcaaaaagtttagcaagccccttcgt
catcttgataccattgcttatgatgcagatctcaaggaaaaaccgataaatgacttacgc
aaattggctgagttgataattgaacgttgtgaagaagccatgaaggaacatgaaagtcaa
aaagaaaatgagaaaactgcagaagtgaatggtgagggtcaacccaaacgtaaccgtgga
ccatcttttaagttgtctggagttactattaatgctaaaacaacacttacaactttggag
gagttagcacctcttgatagtgttgttcctcatgctccagtagaacgagcatcatggact
ctacagataaagagagtgaaagatgctcactgggatattccttggggtattgctgatgat
tcacgattacttcgcggcatctatgagtatgggatgggttcatgggagcagattaaaggt
gatccagcacttaaccttggggacaagatactgcttggggatgagaccaaacctcaaaga
aaacacttggagagtagagcacaatatctgctcaagttgatcagaaaacacatggatctc
ggacctgttcagccaacaaagatgcgcaaaacagtgaaacctcgaaaaccagtcagagaa
ctgaaagaaatatcaaaggctataatagaaaatgatgatagttcagatgatggtgtgaca
aactcgtccatggtgtccagcacaagtctcaagaaggtgcctaaggtgaatgatgaacca
aaggagcataaggaatcaaaggaatcaaagataaaatcaaaagatattaaagaagagaag
gaagatggtgataagattaaagaagaggctgatattaaagatggagagaaaattaaaaag
aagaaagaaaaaaaagagaagaaagagaagaaggataaggagaagaaggctggacctgtg
cacataactgctaatggagaaccagttcctttagatgaaactaaggaattggataaaact
catcctttatgggatgaggtatgtcaaacttctagttga
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integrated database retrieval system
