Panulirus ornatus (ornate spiny lobster): 139757398
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Entry
139757398 CDS
T10834
Symbol
beta'COP
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
porn04131
]
139757398 (beta'COP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
porn04147
]
139757398 (beta'COP)
Membrane trafficking [BR:
porn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
139757398 (beta'COP)
Exosome [BR:
porn04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139757398 (beta'COP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_LRRK2
DUF1441
Beta-prop_WDR35_TULP_N
VPS11_N
MetallophosC
Motif
Other DBs
NCBI-GeneID:
139757398
NCBI-ProteinID:
XP_071533942
LinkDB
All DBs
Position
26:3037935..3094494
Genome browser
AA seq
1315 aa
AA seq
DB search
MYQPLRLDVKRKLTARSDRVKSVDLHPTEPWMLASLYNGNVNVWNIESQQLVKSFEVCDL
PVRASRFVARKNWVVTGSDDMQVRVYNYNTLERVHQFEAHSDYVRCIAVHPTQPFILTCS
DDMTIKLWNWDKKWSCQQVFEGHSHYVMQIVINPKDNNTFASASLDRTVKVWQLGSPQPN
FTLEGHQRGVNYVDYYHGGDKPYLISGADDCLVKIWDYQNKTCVQTLEGHSQNVSSVSFH
PELPIILTGSEDCTVRVWHANTYRLENTLNYGLDRVWCICALKGSNNVCFGYDEGSVMVK
LGREEPAMSMDVSGKIVWARHSEIQQANLKAMGDAEIQDGERLPLAVKDLGSCDIYPQTI
AHNPNGRFVVVCGDGEYIIYTAMALRNKAFGPALEFVWALDSSEYAIRESNFSVKLFKNF
KEKKCFKPDFGCEGIYGGYLLGCRSSTTGLAFYDWETQELVRRIEIQPRQVFWSENGDYV
CIATDENYFILKYSAEAVTAARENKEGQTEDGIEDAFDLVGEVQEVVKTGKWVGDCFIYT
NSVNRLNYYVGGEIVTIAHLDRTLYLLGYIPKDNRLYLGDKELNVVSYELLVSVLEYQTA
VMRRDFDTADRVLPTIPPAHRTRVAHFLEKQGFKKQALAVSTDPEHRFDLALSLGELDVC
LQLAVEAGSEHKWRLVADLAQQRGDLQTAQTCLLRAHDYPGLLLQATASGNAKLIQEVGN
EAQSQGRNNVAFLSHFLTGNLKECLELLIKTNRVPEAAFFARTYLPSEMSRVVDLWKTAA
GEKIGQSLANPAQYDNLFPGLTDAVKTQQFLEKQSCPVPAASSASVPANNERNPIEEMHA
AEAAGTFVFVPPEAEDSEFVDAPQQLLAQDKESLPEDEPMLASAPPEPVVGLSSSPPQPS
QTSAAVSVEQLVPIPAVPAPSVSPTPDLIHEEIPTSIGQELDVGFLVHEEIPRSVNQELD
EGLEHLPKRELNVDDWGKVENLLGEDYSQVVNVEEEEEHIINLEKEDDIGNVVEEEEVIE
EEEAGGGEEEEGEEDLPDDEGDLLDAEGDLLGAEEDFLGKEEEHSVALEKEDVLVAKVSD
MLVPDEDDEDILVAEAKDNVLAPENKNDVLVLENENDLPAPADKKDVLVPDDKNDVFVPE
NKNYLLEAEDKDIIPDVLVPDNKNDVFVPENKNYLLEAEDKDIIPEVDIIPEVEENYVES
VAAAAETAAAVAAAAETAAAVAAETAAVAAAEAAAAPVSVPLPVIHTRRIVGWDEDDVED
WGLEQKKEMLGASGRPAIDQAQLERELELDLEKVRIEDTIDPNDMNLDEEELLAD
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagccactgcgtctagacgtgaagcggaagctgacagcgcggtctgaccgtgta
aagtcagttgatctgcatccaacagagccatggatgctggcatcactctacaatggtaat
gttaatgtttggaacattgagagtcagcaacttgtcaagagttttgaggtttgcgatctc
cctgtgagagcttcaaggtttgtggctcgcaaaaattgggttgtcacaggttcagatgac
atgcaagtacgtgtatacaattacaataccctagagcgtgtgcaccagtttgaggctcat
tcagactatgtccgatgcattgcagttcacccaacccagccattcatcttgacatgcagt
gatgatatgacaatcaagctgtggaattgggacaagaaatggtcttgccagcaagtattt
gaaggccactcacactatgtgatgcagattgttattaaccccaaggacaataacaccttt
gcttcagcttcacttgaccgcactgtgaaggtctggcagctagggtccccccagcccaat
tttaccttggaaggtcatcagagaggagtaaactatgtagattattaccatggtggggac
aaaccttaccttatatcaggtgcagatgactgtcttgtcaaaatctgggactaccagaac
aaaacctgtgttcagacactagagggacactcgcagaatgtatcatcagtgtcattccat
cctgagctgcccatcattctgactggctcggaggactgcactgtaagggtgtggcacgcc
aacacatatcgcctagaaaacacactcaactatgggcttgaccgtgtttggtgcatatgt
gccctcaaaggatccaacaatgtttgtttcggttatgatgagggtagtgtaatggtaaag
cttgggcgtgaggaaccagcaatgtcaatggatgttagtggaaaaattgtatgggcccga
cattctgaaatccagcaggcaaacttaaaagccatgggtgatgcagaaatccaggatggg
gagcgtttgcctttagcagttaaggaccttgggtcgtgtgacatatatccccagaccatt
gcacataatcctaatggaagatttgtggttgtatgtggtgatggagagtatattatctac
actgctatggctctaaggaacaaggcctttggtccagcactagagtttgtgtgggctttg
gactcctctgaatatgccattcgagaatcaaactttagtgttaagctcttcaaaaatttc
aaagaaaagaagtgtttcaagcctgactttggctgtgaaggtatttatggtggatacctt
ctgggatgccgctcaagtacaacgggtcttgcattttatgactgggaaactcaagaattg
gttcgacgtattgagatccagccacgccaggtgttctggtctgagaatggcgattatgtc
tgcatcgccactgatgaaaactacttcattctgaaatatagtgctgaagctgttactgct
gcaagagaaaacaaggaaggtcagacagaggatgggattgaagatgcctttgatcttgtt
ggtgaggttcaagaggttgtgaagacaggcaagtgggtcggagattgttttatttacacc
aattctgtgaatagactgaattattatgtgggtggtgagattgttactatagctcacctt
gataggactctgtaccttcttggttacattcctaaagacaacagactttatcttggagac
aaagagctaaatgttgtgtcgtatgagctgctagtatctgtcctcgaatatcagacagct
gtgatgcggcgagactttgacactgctgatcgtgtactccctactatcccgcctgcccac
cgtacacgcgtggctcatttcctggaaaaacaaggattcaaaaagcaggcccttgctgtt
tctacagatcctgagcatagatttgatctagctctaagccttggtgagttagatgtatgc
cttcagctagcagtagaagcaggttcagagcataagtggagactggtggctgacttggct
caacagcgtggagacttgcagactgcacagacctgcctacttcgtgctcatgattaccca
ggattgttattgcaggctacagcttctggtaatgcgaaattgatccaagaagtggggaat
gaagcacagagtcagggtcgaaataatgtggccttcctttctcactttctcactggaaac
ctcaaagaatgtttagaattactaatcaagactaacagagttcctgaggctgctttcttt
gcaagaacttatttgccaagtgaaatgtcacgtgttgtggacctgtggaaaacagcggct
ggggagaagattgggcagagcctggctaatccagcacagtatgacaatttattcccaggc
cttactgatgctgtaaagactcaacagttccttgaaaagcagtcatgtcctgtcccagca
gcttcttcagcctctgttccagctaacaatgaacgcaatcctattgaagagatgcatgca
gcagaagcagcaggaacatttgtttttgtacctccagaagcagaagattctgaatttgtt
gatgctccacaacagctgttagcacaagataaagagagcctaccagaagatgagccaatg
cttgcttctgctccccctgaacctgttgttggtctctcatcctcaccaccacaaccatcc
caaacatctgccgctgtttctgtagaacagttggtacccatacctgctgtgccagcacct
tctgtctctcctaccccagacttaattcatgaagaaatcccaacgagtattggtcaagag
cttgatgtgggatttttagttcatgaagaaattccaaggagtgttaatcaagagcttgat
gagggacttgaacatcttcccaagcgggaattgaatgtggatgattggggaaaagtggaa
aatcttcttggagaggattattcccaagttgttaatgttgaagaagaagaggaacatatt
ataaatctagaaaaggaggatgatataggaaatgtggtagaggaagaagaagttatagaa
gaagaggaagctggaggaggagaggaagaagaaggggaagaggatcttccagatgatgaa
ggagatctcttagatgcagaaggggatcttttaggtgcagaggaggattttctaggtaaa
gaagaagagcacagtgttgcgttagaaaaagaagatgttttagtggctaaagtcagtgat
atgctagtgccagatgaggatgatgaggacattcttgtggcagaggcaaaggataatgta
cttgcaccagagaataagaatgatgtgctcgtactagagaacgagaatgatttgccagca
ccggcagacaagaaagatgtgcttgtaccagatgacaagaatgatgtgtttgtaccagag
aacaagaattatctgctagaagcagaagacaaggacattataccagatgtgcttgtacca
gataacaagaatgatgtgtttgtaccagagaacaagaattatctgctagaagcagaagac
aaggacattattccagaagtagacattattccagaggtagaagaaaattatgtggaatct
gtagcagcagcagcagaaacagcagcagctgtagcagcagcagcagaaacagcagcagct
gtagcagcggaaacggcagcagtagcagcagcagaagcagcagcagcaccagtatctgta
ccccttcctgtaatccacaccagacggattgtaggctgggatgaagacgatgtagaagac
tggggtttggagcaaaagaaagaaatgctaggtgcaagtggaaggccagccatagatcag
gctcagttggagagggaattagaattggaccttgagaaagtgcgcattgaggacaccatt
gaccctaatgatatgaatctggatgaagaggagctgttggctgattag
DBGET
integrated database retrieval system
