Panulirus ornatus (ornate spiny lobster): 139757649
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Entry
139757649 CDS
T10834
Symbol
Prp40
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139757649 (Prp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
porn03041
]
139757649 (Prp40)
Spliceosome [BR:
porn03041
]
Complex A
U1 snRNP components
U1 related factors
139757649 (Prp40)
Complex B
139757649 (Prp40)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
DTW
DUF4298
WW_2
Motif
Other DBs
NCBI-GeneID:
139757649
NCBI-ProteinID:
XP_071534454
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Position
27:19579416..19794332
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AA seq
894 aa
AA seq
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MSGGGPPGANVPAGYGAPPMGFRMPPPGPGLPPRLPPPAFIPPGAPPGLPPPAFSVPPPG
FMGSFGQAPAGEGSGAVISAGPQLNTPPASNSPATVQAGSPATTPVPSTSASASPASVAV
SGTLSPALPATAPSAPAATKTEATPPAKEKKSVWTEHKAPDGRIYFYNTVTRQSSWEKPD
ELKTPAELLLSQCPWKEYKSESGKTYYHNVQTKESRWTIPKELEELKTKIAAEENASKTC
NTEDKKPASALDQAMAATLAAIQVPATSKAPEKKSGPLDKEELNKPTSLGEGTKQAPRIP
VWVEPEVVKEVPESKQLVFKDKKEALEAFKEFLRDKGVPSDATWEKAVRMIQNDARYEAF
NKLNEKKQAFNAYKVQRAKEEKEEQRLRAKKAKEDLEQFLLNSERMNSTVKYYRCHEMFQ
HLELWKAVPESERREVYEDVVFNLAKKEKEENKAMRKRNMKVLSEILDSMTNITFKTTWS
EAQQMLIDNPTFAEDTDLLSMDKEDALIVFAEHIKQLEEEEEEEREREKKRIKRQQRKCR
DNYISLLDELHEQGKLTSMSLWVELYPMISADIRFTAMLGQPGSTPLDLFKFYVADLKSR
FHDEKKIIKEILKEKSFEVQVKTSFKEFATVVCDDPRSATLDAGNVKLTYNALIEKAEAR
EKERLKEEARKMRRLEAGLRAAFKSIGVDSGSTWEDVRPRVQHLSSFTAVTIEAERIRIF
KEYQQHLEEACGHHHSRNKKKSKKKDRKKSRSRSHSYSSDSDDGHHKRRSRRSRSRSRSY
SEDSDDDRRRSRKKKSKKKKGRSRSRSLSSEDSYRSRRSSKKKKHRSRSRSRSRSRGGSY
RSSHMRSRGHSEGDSARRSSEREAGEVSLEEGELSEDELEKKRAQLMKELENIK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggagggccaccaggtgctaatgttcctgcgggttatggtgcacctcccatg
ggctttaggatgcctcctccaggacctggtttgcctcctcgtctgccacctccagcattt
attcctccaggagctccaccaggcttgccaccaccagcattcagtgtcccacctcctggt
tttatgggctcctttggtcaggctcctgcaggtgaagggagtggagctgtaatttctgca
ggtcctcagctgaatactcctcccgccagtaattctcctgctactgttcaagcaggatct
cctgccactactcctgtcccatcaacttctgcaagtgcatcaccagccagtgtagctgtg
tcgggaacactttctcctgcccttcctgccacagcccctagtgctcctgcagcaaccaag
actgaggctactcctcctgccaaggaaaagaagagtgtatggactgagcacaaggcgcct
gatggtcgaatctatttctataacacagtgacaaggcagtcatcatgggagaagcctgat
gagctcaagaccccagcagagttattactctctcagtgcccttggaaggaatacaaatca
gagagcggaaagacttattaccacaatgttcaaacgaaggagtcgcgatggacaattcct
aaagaattggaggaactcaaaactaaaattgcagcagaagagaatgcgagtaaaacttgt
aatacagaggacaaaaaaccagcatctgctcttgaccaagctatggcagctactcttgct
gccatccaggttcctgccacaagtaaagccccagagaagaagtccggcccgttggataag
gaagagctcaataaacccaccagtctaggtgagggaactaagcaggcaccacgtattcca
gtttgggttgaaccagaagtagtgaaggaggtgccagagtcaaaacagcttgtgtttaag
gacaaaaaagaggctttggaagctttcaaagaatttcttcgagataagggtgtaccaagt
gacgctacttgggaaaaggctgtccggatgatccagaatgatgcacgttatgaagctttc
aacaaattgaatgagaagaaacaagcttttaatgcatataaagtccagcgtgccaaggaa
gagaaggaggagcaacgactacgagccaagaaagcaaaggaagatctggagcagttttta
ctaaacagtgaacgtatgaactctactgtcaagtactaccgctgccatgagatgtttcag
cacttagagctttggaaagctgtacctgagtctgagcgtcgtgaagtgtatgaggatgtt
gtattcaacttagctaagaaggagaaggaagaaaacaaagccatgaggaagaggaacatg
aaggtgctgagtgaaatattagacagtatgacgaacatcaccttcaaaactacatggtca
gaggcacagcagatgctcattgacaacccaacatttgctgaagacactgatctacttagt
atggacaaagaagatgctttgattgtttttgctgaacatataaagcaacttgaagaagaa
gaggaggaggaacgtgagagggagaagaagaggatcaagcggcaacagagaaaatgccga
gacaactatatatctctgttggatgaacttcatgaacagggaaaacttacctctatgtcc
ttgtgggtggagctctatcctatgatatcagcagacattagattcacagccatgttaggt
caaccagggtcaactccacttgatctttttaagttttatgtcgcagatctcaagtctcgt
ttccatgatgagaaaaagattattaaggagatcttgaaagagaagtcctttgaagttcag
gtgaagacaagcttcaaagagtttgcaacagtggtatgtgatgatcctcgttcagctaca
ctggatgctggaaatgtcaagctaacttacaatgctctcattgaaaaggcagaagcaagg
gaaaaggaacgactgaaagaggaagctcgcaagatgcgtcggctggaggcagggctgcgt
gcagcattcaaatccattggtgttgattctggttctacttgggaagatgtgcgacctcgt
gtgcaacacttgtcatctttcacagcagtcacgattgaggcagagcgcatcagaatattt
aaagaatatcagcagcatctggaagaggcttgtggccatcatcactctcgcaataaaaag
aagagcaaaaagaaggaccggaagaaatcacgatctcgctcccattcttactcgtctgat
agtgatgatggtcatcacaaacgcaggtcacggcgttcccggtcccgctccagaagttac
tctgaggattcagatgatgaccgtcggagatctcgaaagaaaaagagcaagaagaagaag
ggtcgaagtcgttctcgatccttaagcagtgaagactcttacagatcaagacgctcaagc
aagaagaagaagcatcgttctcgctcgcgttcacggtccagatcacgtggcggctcttac
agaagttctcatatgaggtcccgaggccattcagaaggtgattcagctcgaaggtcttca
gaacgtgaagctggtgaagttagcttagaggagggtgagctaagtgaagatgaacttgaa
aagaagagggcacagttaatgaaagaacttgaaaatatcaagtaa
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