Panulirus ornatus (ornate spiny lobster): 139758016
Help
Entry
139758016 CDS
T10834
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139758016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porn03021
]
139758016
03036 Chromosome and associated proteins [BR:
porn03036
]
139758016
Transcription machinery [BR:
porn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139758016
Coactivators
SAGA/TFTC/STAGA complex
139758016
Chromosome and associated proteins [BR:
porn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
139758016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
ELP3_N
Motif
Other DBs
NCBI-GeneID:
139758016
NCBI-ProteinID:
XP_071535113
LinkDB
All DBs
Position
29:complement(3434516..3491980)
Genome browser
AA seq
910 aa
AA seq
DB search
MATSNSLDEVLCTDVDPSAVTAIVGSLETQLAVSAKTAANQPVNASVNGGINNSATVVVE
GRTNGGKIGVRGPAVSSGAVFAGKVVSSVGAGQAVGQVLQTTADTGVVQGGSGAGAALQG
GAQVSQFISKGAAGVKPVYGAAPTPMTGTQGTQVVNGGVTGAGTGGAPQVSLQTQLALKG
LTKVVTAAGSVGQTAVIMSKPGTVTAVPSTGTPGTVSIPQGMQIINMRPGQTIKTTQGTT
IAPRMILNQAQVLPTGIRAGQPGQITLGALQGLPPGAQGHLLVKTENGQLQLLRVNTAAT
PGQLPANVTTTTALQQAPNAAYRFQPPPASTVAVRSVMVSSAAARPATIILQSQASNNML
ESVGVRTECQNTAALSTATTTTTIATQAVSAGTPTSLAVTPGTTVAGTIVAPTLTTATPT
TQATQPAAVGSQTISAESAKTKCKNFLATLLKLANEQRAPVARNVRTLIQGLIDGRVEPE
AFTEELQKDLNSSPQPCLVPFLKKTLPYLRVSLARQELTIDGVRPPPISAVTPLPGVTTV
IPTMPVTRPVAPTTSGAVRMVAHSTVSSPTVVQRPVNATAAPTRVVSQQVQQVRVQGNKT
VVTTVRQNTPAATAASSTANATTNSLPTATKTITVNKAIPTKDKDKTKDKLYTYSSSYSS
SGAADDDINDVAAMGGVNLGEESQRILDSTGFVGTQIRSCKDENFLLNTALTQRIRQICS
KYGLDDAPKDVVSLVSHATQERLKTIVEKLAVISDHRLDIIKSDNRYEVRQDVKGQLRFL
EELDKLEKKRKDEQEREMLMRAAKSRSKSEDPEQAKLKAKAKEMQRVEMEEMRQRDANRT
ALNALQGPKKKPKLDLSVVDDGATFSGTFTQKSMPLRPRIKRVNMRDLMFLMEQEKELNK
SPLLYRSYLK
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagtaacagcctggacgaggtgttgtgtacagacgtagatccgagtgctgtc
accgctattgtagggtccctagagacccagttagctgtatcagcaaaaaccgcagcaaat
caacctgttaatgccagtgttaatggcgggataaataacagcgctacagtagtagtggaa
ggcagaacaaacggcggtaaaataggggtcagaggcccggcggtgagcagtggtgcagtg
tttgcaggaaaggttgtgtcaagcgtgggtgctgggcaagctgttgggcaggttctgcag
actactgcagacacgggggtggtgcagggaggctcgggtgctggcgccgccctgcagggg
ggtgcccaagtctcccagtttatcagcaagggcgccgcgggcgtgaagccggtgtatggg
gccgcccccacgcccatgacaggcacccagggcacgcaggtggtgaacgggggtgtaaca
ggggcgggcacaggaggagcccctcaagttagcctgcaaacccaactagccctgaaggga
ttgaccaaagtggtgacagcggcaggttcggtgggccagacggcagtcatcatgtcaaag
cctggtacagtgactgccgtgccctccactggcaccccaggcacagtgtctatccctcag
ggcatgcagatcatcaacatgaggccgggacagaccattaagaccacgcaaggcaccacc
atcgcccccaggatgatcctgaaccaggcgcaggtcctcccgacaggcatcagggcgggc
caacctgggcaaattactcttggggcactccaaggtctacctcctggggcacagggccat
ttattggtaaaaacggagaatggtcagcttcagttactccgtgtcaacactgctgccacc
cctggccagctacctgcaaatgtcaccaccactacagctttacaacaagctcctaatgct
gcatatagattccaaccaccaccagctagcacggttgcggtgaggtccgtgatggtgtcg
tcagcagccgcacgccccgccaccatcatcctccagtcacaagccagtaacaacatgcta
gaaagtgttggagtaaggactgagtgtcaaaacacagctgcactctctacggccaccact
accacaacaattgccacacaggctgtatcagctggcactcccacctctttagctgtcact
cctggcactaccgttgcaggcacgatcgtagctccaacgttgaccactgccactcccacc
acacaagccactcagcctgctgccgttggctctcaaactatctcagcagaatcggcaaaa
acaaaatgtaaaaacttcctggccactttactaaaattagccaatgagcagcgggcacct
gtggcccggaatgttcgaaccttaattcagggtctcattgatggtagagtggagccagaa
gcatttacggaagaactccaaaaagacctcaattcttccccacagccatgccttgttccc
tttctcaagaaaactttaccatatctgcgggtgtcgttagctcgacaggaactgactatt
gatggtgttcggcctcccccgatatctgcagtcacgccacttcccggtgtaaccactgtt
atacccactatgcctgttactcgtcctgtagcccctacaacttctggggcagtaagaatg
gttgcccattctactgtttcctcccctactgttgttcagcggcctgtaaatgctactgca
gcacctacaagagttgtctctcagcaagtgcagcaggtacgagtccagggcaacaaaact
gtggtgactacggtacgtcaaaacactccagccgccacagctgccagcagtactgccaat
gccactaccaactcattacctactgccaccaaaaccataactgttaataaggctatccct
accaaagataaagacaagactaaagataaactatacacatacagcagttcctattcctct
agtggggcagcagatgatgacatcaatgatgtggctgcaatgggtggagttaatttgggg
gaggaatcccaaagaatccttgattctacggggtttgttggcacgcagatacgatcgtgt
aaagatgagaatttcctattaaacactgcgctaactcagagaataaggcaaatatgttca
aaatatggcttggatgatgctccaaaagatgttgtgtctctggtatcccatgcaacacag
gaaagactaaaaactatagttgaaaagttggcagtcatctcagatcacagattagatatt
attaagagtgataaccgttatgaagtccgacaagatgttaaaggtcagcttcgtttccta
gaagagttagacaagttggagaagaagcgaaaagatgaacaagagcgagagatgctgatg
cgagcggcaaaatctagaagtaaatctgaagaccccgagcaggcaaaattaaaggcaaaa
gcaaaagagatgcagcgtgttgagatggaagagatgcggcaaagagatgccaatcgcact
gccctaaatgcgttacaagggcccaagaagaagcctaaacttgatctttctgtggttgat
gatggtgcaacttttagtggaacatttacccaaaaatcgatgcctctacgaccacgtatt
aaacgggttaacatgcgagatctaatgtttttgatggagcaagagaaggagctcaacaaa
tcaccgcttctgtaccgttcttacctcaaatag
DBGET
integrated database retrieval system
